RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 STRIP1Q5VSL9 837 aa10.37□□□□□ -0.75
PSEN1-215ENST00000556011 PPP1R12CQ9BZL4 782 aa10.37□□□□□ -0.75
PSEN1-215ENST00000556011 GGA1Q9UJY5 639 aa10.37□□□□□ -0.75
PSEN1-215ENST00000556011 DOPEY2Q9Y3R5 2298 aa10.37□□□□□ -0.75
PSEN1-215ENST00000556011 SPDYE2BA6NHP3 402 aa10.36□□□□□ -0.75
PSEN1-215ENST00000556011 SPDYE6P0CI01 402 aa10.36□□□□□ -0.75
PSEN1-215ENST00000556011 COL28A1Q2UY09 1125 aa10.36□□□□□ -0.75
PSEN1-215ENST00000556011 PPP1R42Q7Z4L9 355 aa10.36□□□□□ -0.75
PSEN1-215ENST00000556011 AEBP1Q8IUX7 1158 aa10.36□□□□□ -0.75
PSEN1-215ENST00000556011 ZNF34Q8IZ26 560 aa10.36□□□□□ -0.75
PSEN1-215ENST00000556011 FMNL2Q96PY5 1086 aa10.36□□□□□ -0.75
PSEN1-215ENST00000556011 PODXL2Q9NZ53 605 aa10.36□□□□□ -0.75
PSEN1-215ENST00000556011 GPSM3Q9Y4H4 160 aa10.36□□□□□ -0.75
PSEN1-215ENST00000556011 A0A1B0GUL6 1792 aa10.35□□□□□ -0.75
PSEN1-215ENST00000556011 LTBRP36941 435 aa10.35□□□□□ -0.75
PSEN1-215ENST00000556011 VARS2Q5ST30 1063 aaKnown RBP10.35□□□□□ -0.75
PSEN1-215ENST00000556011 GADL1Q6ZQY3 521 aa10.35□□□□□ -0.75
PSEN1-215ENST00000556011 ANKRD33Q7Z3H0 272 aa10.35□□□□□ -0.75
PSEN1-215ENST00000556011 TOX2Q96NM4 488 aa10.35□□□□□ -0.75
PSEN1-215ENST00000556011 SUGCTQ9HAC7 445 aa10.35□□□□□ -0.75
PSEN1-215ENST00000556011 CLDND1Q9NY35 253 aa10.35□□□□□ -0.75
PSEN1-215ENST00000556011 ANKIB1Q9P2G1 1089 aa10.35□□□□□ -0.75
PSEN1-215ENST00000556011 USP18Q9UMW8 372 aa10.35□□□□□ -0.75
PSEN1-215ENST00000556011 SHROOM3Q8TF72 1996 aa10.34□□□□□ -0.75
PSEN1-215ENST00000556011 INPP5BP32019 993 aa10.34□□□□□ -0.75
PSEN1-215ENST00000556011 CYP2C18P33260 490 aa10.34□□□□□ -0.75
PSEN1-215ENST00000556011 CBX2Q14781 532 aaPredicted RBP10.34□□□□□ -0.75
PSEN1-215ENST00000556011 CFAP100Q494V2 611 aa10.34□□□□□ -0.75
PSEN1-215ENST00000556011 CCDC105Q8IYK2 499 aa10.34□□□□□ -0.75
PSEN1-215ENST00000556011 TRPV1Q8NER1 839 aa10.34□□□□□ -0.75
PSEN1-215ENST00000556011 MTUS1Q9ULD2 1270 aa10.34□□□□□ -0.75
PSEN1-215ENST00000556011 PCNX1Q96RV3 2341 aa10.34□□□□□ -0.75
PSEN1-215ENST00000556011 PTPRQQ9UMZ3 2332 aa10.34□□□□□ -0.75
PSEN1-215ENST00000556011 UTYO14607 1347 aa10.33□□□□□ -0.76
PSEN1-215ENST00000556011 ERVV-1B6SEH8 477 aa10.33□□□□□ -0.76
PSEN1-215ENST00000556011 TGM1P22735 817 aa10.33□□□□□ -0.76
PSEN1-215ENST00000556011 PTPN21Q16825 1174 aa10.33□□□□□ -0.76
PSEN1-215ENST00000556011 ZFPM1Q8IX07 1006 aa10.33□□□□□ -0.76
PSEN1-215ENST00000556011 NGEFQ8N5V2 710 aa10.33□□□□□ -0.76
PSEN1-215ENST00000556011 USP6NLQ92738 828 aa10.33□□□□□ -0.76
PSEN1-215ENST00000556011 PHF24Q9UPV7 400 aa10.33□□□□□ -0.76
PSEN1-215ENST00000556011 TLN1Q9Y490 2541 aaKnown RBP10.33□□□□□ -0.76
PSEN1-215ENST00000556011 PTPRFP10586 1907 aa10.33□□□□□ -0.76
PSEN1-215ENST00000556011 MYO10Q9HD67 2058 aa10.32□□□□□ -0.76
PSEN1-215ENST00000556011 CLCN5P51795 746 aa10.32□□□□□ -0.76
PSEN1-215ENST00000556011 GTF2IP78347 998 aa10.32□□□□□ -0.76
PSEN1-215ENST00000556011 TNFAIP1Q13829 316 aa10.32□□□□□ -0.76
PSEN1-215ENST00000556011 COL19A1Q14993 1142 aa10.32□□□□□ -0.76
PSEN1-215ENST00000556011 KRTAP21-3Q3LHN1 58 aa10.32□□□□□ -0.76
PSEN1-215ENST00000556011 FASTKD5Q7L8L6 764 aaKnown RBP10.32□□□□□ -0.76
PSEN1-215ENST00000556011 SOCS4Q8WXH5 440 aa10.32□□□□□ -0.76
PSEN1-215ENST00000556011 FAM84BQ96KN1 310 aaPredicted RBP10.32□□□□□ -0.76
PSEN1-215ENST00000556011 UTP14AQ9BVJ6 771 aaKnown RBP10.32□□□□□ -0.76
PSEN1-215ENST00000556011 FLRT1Q9NZU1 646 aa10.32□□□□□ -0.76
PSEN1-215ENST00000556011 SLC45A1Q9Y2W3 748 aa10.32□□□□□ -0.76
PSEN1-215ENST00000556011 KIF20BQ96Q89 1820 aa10.32□□□□□ -0.76
PSEN1-215ENST00000556011 A0A1B0GUL7 405 aa10.31□□□□□ -0.76
PSEN1-215ENST00000556011 PI15O43692 258 aa10.31□□□□□ -0.76
PSEN1-215ENST00000556011 SPINK2P20155 84 aa10.31□□□□□ -0.76
PSEN1-215ENST00000556011 DLX2Q07687 328 aaPredicted RBP10.31□□□□□ -0.76
PSEN1-215ENST00000556011 MFSD14CQ5VZR4 134 aa10.31□□□□□ -0.76
PSEN1-215ENST00000556011 TTLL5Q6EMB2 1281 aa10.31□□□□□ -0.76
PSEN1-215ENST00000556011 DTWD2Q8NBA8 298 aa10.31□□□□□ -0.76
PSEN1-215ENST00000556011 GATA6Q92908 595 aa10.31□□□□□ -0.76
PSEN1-215ENST00000556011 MAP3K15Q6ZN16 1313 aa10.31□□□□□ -0.76
PSEN1-215ENST00000556011 RFX7Q2KHR2 1363 aa10.3□□□□□ -0.76
PSEN1-215ENST00000556011 TCP10L2B9ZVM9 353 aa10.3□□□□□ -0.76
PSEN1-215ENST00000556011 CXCL11O14625 94 aa10.3□□□□□ -0.76
PSEN1-215ENST00000556011 KCNQ3O43525 872 aa10.3□□□□□ -0.76
PSEN1-215ENST00000556011 POU3F2P20265 443 aaPredicted RBP10.3□□□□□ -0.76
PSEN1-215ENST00000556011 ICAM3P32942 547 aa10.3□□□□□ -0.76
PSEN1-215ENST00000556011 RGS2P41220 211 aa10.3□□□□□ -0.76
PSEN1-215ENST00000556011 SMAD4Q13485 552 aaKnown RBP10.3□□□□□ -0.76
PSEN1-215ENST00000556011 RRP1BQ14684 758 aaKnown RBP10.3□□□□□ -0.76
PSEN1-215ENST00000556011 NETO1Q8TDF5 533 aa10.3□□□□□ -0.76
PSEN1-215ENST00000556011 ZBTB3Q9H5J0 574 aa10.3□□□□□ -0.76
PSEN1-215ENST00000556011 SIP14410 1827 aa10.3□□□□□ -0.76
PSEN1-215ENST00000556011 A0A0G2JLL6 359 aaPredicted RBP10.29□□□□□ -0.76
PSEN1-215ENST00000556011 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.29□□□□□ -0.76
PSEN1-215ENST00000556011 PYCARD-AS1I3L0S3 204 aa10.29□□□□□ -0.76
PSEN1-215ENST00000556011 TCEAL5Q5H9L2 206 aa10.29□□□□□ -0.76
PSEN1-215ENST00000556011 TTLL7Q6ZT98 887 aa10.29□□□□□ -0.76
PSEN1-215ENST00000556011 PRRT2Q7Z6L0 340 aaPredicted RBP10.29□□□□□ -0.76
PSEN1-215ENST00000556011 RIN2Q8WYP3 895 aaPredicted RBP10.29□□□□□ -0.76
PSEN1-215ENST00000556011 APBA2Q99767 749 aa10.29□□□□□ -0.76
PSEN1-215ENST00000556011 ADAM33Q9BZ11 813 aa10.29□□□□□ -0.76
PSEN1-215ENST00000556011 PARD6AQ9NPB6 346 aa10.29□□□□□ -0.76
PSEN1-215ENST00000556011 ZNF70Q9UC06 446 aaPredicted RBP10.29□□□□□ -0.76
PSEN1-215ENST00000556011 UTP20O75691 2785 aaKnown RBP10.29□□□□□ -0.76
PSEN1-215ENST00000556011 LOC285556D6RIA3 1793 aa10.29□□□□□ -0.76
PSEN1-215ENST00000556011 LRBAP50851 2863 aa10.28□□□□□ -0.76
PSEN1-215ENST00000556011 A0A1W2PQ45 241 aaPredicted RBP10.28□□□□□ -0.76
PSEN1-215ENST00000556011 A0A1W2PQY0 241 aa10.28□□□□□ -0.76
PSEN1-215ENST00000556011 F8W031 263 aaPredicted RBP10.28□□□□□ -0.76
PSEN1-215ENST00000556011 KCNC4Q03721 635 aa10.28□□□□□ -0.76
PSEN1-215ENST00000556011 SPDYE2Q495Y8 402 aa10.28□□□□□ -0.76
PSEN1-215ENST00000556011 ZC3H14Q6PJT7 736 aaKnown RBP10.28□□□□□ -0.76
PSEN1-215ENST00000556011 RPAINQ86UA6 219 aa10.28□□□□□ -0.76
PSEN1-215ENST00000556011 MFSD1Q9H3U5 465 aa10.28□□□□□ -0.76
PSEN1-215ENST00000556011 ITPR2Q14571 2701 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms