RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 CDK12Q9NYV4 1490 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-233ENST00000555816 AFF2P51816 1311 aa7.55□□□□□ -1.2
ATXN3-233ENST00000555816 DYNC1LI2O43237 492 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-233ENST00000555816 LIG1P18858 919 aa7.55□□□□□ -1.2
ATXN3-233ENST00000555816 FZD5Q13467 585 aa7.55□□□□□ -1.2
ATXN3-233ENST00000555816 COL19A1Q14993 1142 aa7.55□□□□□ -1.2
ATXN3-233ENST00000555816 SMYD4Q8IYR2 804 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-233ENST00000555816 NETO1Q8TDF5 533 aa7.55□□□□□ -1.2
ATXN3-233ENST00000555816 LRRC59Q96AG4 307 aaKnown RBP7.55□□□□□ -1.2
ATXN3-233ENST00000555816 EMILIN2Q9BXX0 1053 aa7.55□□□□□ -1.2
ATXN3-233ENST00000555816 EFCAB6Q5THR3 1501 aa7.55□□□□□ -1.2
ATXN3-233ENST00000555816 LRP6O75581 1613 aa7.55□□□□□ -1.2
ATXN3-233ENST00000555816 PLEKHG1Q9ULL1 1385 aa7.55□□□□□ -1.2
ATXN3-233ENST00000555816 MAST1Q9Y2H9 1570 aa7.54□□□□□ -1.2
ATXN3-233ENST00000555816 ERBINQ96RT1 1412 aa7.54□□□□□ -1.2
ATXN3-233ENST00000555816 ARID1BQ8NFD5 2236 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-233ENST00000555816 FAAP100Q0VG06 881 aa7.54□□□□□ -1.2
ATXN3-233ENST00000555816 BRINP3Q76B58 766 aa7.54□□□□□ -1.2
ATXN3-233ENST00000555816 DISC1Q9NRI5 854 aa7.54□□□□□ -1.2
ATXN3-233ENST00000555816 PCDHGC5Q9Y5F6 944 aa7.54□□□□□ -1.2
ATXN3-233ENST00000555816 NOS1P29475 1434 aa7.53□□□□□ -1.2
ATXN3-233ENST00000555816 MROH1Q8NDA8 1641 aa7.53□□□□□ -1.2
ATXN3-233ENST00000555816 EIF2AK4Q9P2K8 1649 aaKnown RBP7.53□□□□□ -1.2
ATXN3-233ENST00000555816 ZNF862O60290 1169 aa7.53□□□□□ -1.2
ATXN3-233ENST00000555816 PRKCQQ04759 706 aa7.53□□□□□ -1.2
ATXN3-233ENST00000555816 OGFOD2Q6N063 350 aa7.53□□□□□ -1.2
ATXN3-233ENST00000555816 WDR89Q96FK6 387 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-233ENST00000555816 ABCC5O15440 1437 aa7.52□□□□□ -1.2
ATXN3-233ENST00000555816 XIRP1Q702N8 1843 aaKnown RBP7.52□□□□□ -1.2
ATXN3-233ENST00000555816 PIK3R4Q99570 1358 aa7.52□□□□□ -1.21
ATXN3-233ENST00000555816 FAM87AP0C7U9 286 aa7.52□□□□□ -1.21
ATXN3-233ENST00000555816 PLCL1Q15111 1095 aa7.52□□□□□ -1.21
ATXN3-233ENST00000555816 SCARA3Q6AZY7 606 aa7.52□□□□□ -1.21
ATXN3-233ENST00000555816 ATG4DQ86TL0 474 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-233ENST00000555816 PDZD3Q86UT5 571 aa7.52□□□□□ -1.21
ATXN3-233ENST00000555816 EPS8L3Q8TE67 593 aaKnown RBP7.52□□□□□ -1.21
ATXN3-233ENST00000555816 C8orf37Q96NL8 207 aa7.52□□□□□ -1.21
ATXN3-233ENST00000555816 RIMS2Q9UQ26 1411 aa7.52□□□□□ -1.21
ATXN3-233ENST00000555816 ANKRD30AQ9BXX3 1397 aa7.51□□□□□ -1.21
ATXN3-233ENST00000555816 KRTAP4-8A0A0G2JLE6 195 aa7.51□□□□□ -1.21
ATXN3-233ENST00000555816 ARNTP27540 789 aa7.51□□□□□ -1.21
ATXN3-233ENST00000555816 FCGRTP55899 365 aa7.51□□□□□ -1.21
ATXN3-233ENST00000555816 ERVK-24P63145 666 aa7.51□□□□□ -1.21
ATXN3-233ENST00000555816 PIK3C2BO00750 1634 aa7.51□□□□□ -1.21
ATXN3-233ENST00000555816 LMTK2Q8IWU2 1503 aa7.51□□□□□ -1.21
ATXN3-233ENST00000555816 NWD1Q149M9 1564 aa7.5□□□□□ -1.21
ATXN3-233ENST00000555816 SETD1AO15047 1707 aaKnown RBP7.5□□□□□ -1.21
ATXN3-233ENST00000555816 PHLPP1O60346 1717 aa7.5□□□□□ -1.21
ATXN3-233ENST00000555816 COL16A1Q07092 1604 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-233ENST00000555816 TMEM265A0A087WTH1 108 aa7.5□□□□□ -1.21
ATXN3-233ENST00000555816 FUT4P22083 530 aa7.5□□□□□ -1.21
ATXN3-233ENST00000555816 NME2P22392 152 aa7.5□□□□□ -1.21
ATXN3-233ENST00000555816 ZNF157P51786 506 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-233ENST00000555816 TTLL4Q14679 1199 aa7.5□□□□□ -1.21
ATXN3-233ENST00000555816 IFI16Q16666 785 aaKnown RBP7.5□□□□□ -1.21
ATXN3-233ENST00000555816 ZC3H12AQ5D1E8 599 aaKnown RBP7.5□□□□□ -1.21
ATXN3-233ENST00000555816 RNF214Q8ND24 703 aa7.5□□□□□ -1.21
ATXN3-233ENST00000555816 BCO2Q9BYV7 579 aa7.5□□□□□ -1.21
ATXN3-233ENST00000555816 SRCIN1Q9C0H9 1055 aa7.5□□□□□ -1.21
ATXN3-233ENST00000555816 LGR6Q9HBX8 967 aa7.5□□□□□ -1.21
ATXN3-233ENST00000555816 GPN3Q9UHW5 284 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-233ENST00000555816 SAMM50Q9Y512 469 aa7.5□□□□□ -1.21
ATXN3-233ENST00000555816 SNX11Q9Y5W9 270 aa7.5□□□□□ -1.21
ATXN3-233ENST00000555816 ZFYVE9O95405 1425 aa7.5□□□□□ -1.21
ATXN3-233ENST00000555816 SETD5Q9C0A6 1442 aa7.5□□□□□ -1.21
ATXN3-233ENST00000555816 SOWAHDA6NJG2 315 aa7.49□□□□□ -1.21
ATXN3-233ENST00000555816 RNGTTO60942 597 aaKnown RBP7.49□□□□□ -1.21
ATXN3-233ENST00000555816 CDK5R2Q13319 367 aa7.49□□□□□ -1.21
ATXN3-233ENST00000555816 ZNF792Q3KQV3 632 aa7.49□□□□□ -1.21
ATXN3-233ENST00000555816 SPRED2Q7Z698 418 aa7.49□□□□□ -1.21
ATXN3-233ENST00000555816 KCNB2Q92953 911 aa7.49□□□□□ -1.21
ATXN3-233ENST00000555816 ZC3H12CQ9C0D7 883 aaKnown RBP7.49□□□□□ -1.21
ATXN3-233ENST00000555816 DCTN4Q9UJW0 460 aa7.49□□□□□ -1.21
ATXN3-233ENST00000555816 TRPC5Q9UL62 973 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-233ENST00000555816 GNEQ9Y223 722 aaKnown RBP7.49□□□□□ -1.21
ATXN3-233ENST00000555816 RGS12O14924 1447 aa7.48□□□□□ -1.21
ATXN3-233ENST00000555816 PAPLNO95428 1278 aa7.48□□□□□ -1.21
ATXN3-233ENST00000555816 PLCB3Q01970 1234 aa7.48□□□□□ -1.21
ATXN3-233ENST00000555816 ADAMTS13Q76LX8 1427 aa7.48□□□□□ -1.21
ATXN3-233ENST00000555816 SULF2Q8IWU5 870 aa7.48□□□□□ -1.21
ATXN3-233ENST00000555816 PLD6Q8N2A8 252 aaKnown RBP7.48□□□□□ -1.21
ATXN3-233ENST00000555816 DUSP23Q9BVJ7 150 aa7.48□□□□□ -1.21
ATXN3-233ENST00000555816 SSU72Q9NP77 194 aaKnown RBP7.48□□□□□ -1.21
ATXN3-233ENST00000555816 CACNA2D2Q9NY47 1150 aa7.48□□□□□ -1.21
ATXN3-233ENST00000555816 AHDC1Q5TGY3 1603 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-233ENST00000555816 KDM5AP29375 1690 aaKnown RBP7.47□□□□□ -1.21
ATXN3-233ENST00000555816 ADGRB3O60242 1522 aa7.47□□□□□ -1.21
ATXN3-233ENST00000555816 CFAP65Q6ZU64 1925 aaKnown RBP7.47□□□□□ -1.21
ATXN3-233ENST00000555816 DAPK1P53355 1430 aa7.47□□□□□ -1.21
ATXN3-233ENST00000555816 GIPC1O14908 333 aa7.47□□□□□ -1.21
ATXN3-233ENST00000555816 ZNF252P-AS1Q0IIN9 211 aa7.47□□□□□ -1.21
ATXN3-233ENST00000555816 DSC3Q14574 896 aa7.47□□□□□ -1.21
ATXN3-233ENST00000555816 ARHGAP27Q6ZUM4 889 aa7.47□□□□□ -1.21
ATXN3-233ENST00000555816 TMC7Q7Z402 723 aa7.47□□□□□ -1.21
ATXN3-233ENST00000555816 WFDC3Q8IUB2 231 aa7.47□□□□□ -1.21
ATXN3-233ENST00000555816 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.47□□□□□ -1.21
ATXN3-233ENST00000555816 ANKRD24Q8TF21 1146 aa7.47□□□□□ -1.21
ATXN3-233ENST00000555816 CEP44Q9C0F1 390 aa7.47□□□□□ -1.21
ATXN3-233ENST00000555816 RPRD2Q5VT52 1461 aaKnown RBP7.47□□□□□ -1.21
ATXN3-233ENST00000555816 CEP152O94986 1710 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms