RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 NYAP2Q9P242 653 aa14.98□□□□□ -0.01
SYNE2-219ENST00000555323 KCNH4Q9UQ05 1017 aa14.98□□□□□ -0.01
SYNE2-219ENST00000555323 LAMA4Q16363 1823 aa14.97□□□□□ -0.01
SYNE2-219ENST00000555323 IRF6O14896 467 aa14.97□□□□□ -0.01
SYNE2-219ENST00000555323 ECE1P42892 770 aa14.97□□□□□ -0.01
SYNE2-219ENST00000555323 RAB3GAP1Q15042 981 aa14.97□□□□□ -0.01
SYNE2-219ENST00000555323 ADCK5Q3MIX3 580 aa14.97□□□□□ -0.01
SYNE2-219ENST00000555323 CCDC178Q5BJE1 867 aa14.97□□□□□ -0.01
SYNE2-219ENST00000555323 RRP12Q5JTH9 1297 aaKnown RBP14.97□□□□□ -0.01
SYNE2-219ENST00000555323 MB21D2Q8IYB1 491 aaPredicted RBP14.97□□□□□ -0.01
SYNE2-219ENST00000555323 ANKS1AQ92625 1134 aa14.97□□□□□ -0.01
SYNE2-219ENST00000555323 CEP95Q96GE4 821 aa14.97□□□□□ -0.01
SYNE2-219ENST00000555323 MS4A4AQ96JQ5 239 aa14.97□□□□□ -0.01
SYNE2-219ENST00000555323 TOMM22Q9NS69 142 aa14.97□□□□□ -0.01
SYNE2-219ENST00000555323 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.97□□□□□ -0.01
SYNE2-219ENST00000555323 SYNPO2Q9UMS6 1093 aa14.97□□□□□ -0.01
SYNE2-219ENST00000555323 TESPA1A2RU30 521 aaPredicted RBP14.96□□□□□ -0.01
SYNE2-219ENST00000555323 C19orf81C9J6K1 198 aa14.96□□□□□ -0.01
SYNE2-219ENST00000555323 HMGB1P09429 215 aaKnown RBP14.96□□□□□ -0.01
SYNE2-219ENST00000555323 BACE1P56817 501 aa14.96□□□□□ -0.01
SYNE2-219ENST00000555323 HTRA3P83110 453 aa14.96□□□□□ -0.01
SYNE2-219ENST00000555323 EXOSC10Q01780 885 aaKnown RBP14.96□□□□□ -0.01
SYNE2-219ENST00000555323 SPP2Q13103 211 aa14.96□□□□□ -0.01
SYNE2-219ENST00000555323 SH3D19Q5HYK7 790 aa14.96□□□□□ -0.01
SYNE2-219ENST00000555323 CYP4F22Q6NT55 531 aa14.96□□□□□ -0.01
SYNE2-219ENST00000555323 RALYLQ86SE5 291 aaKnown RBP14.96□□□□□ -0.01
SYNE2-219ENST00000555323 CCDC84Q86UT8 332 aaPredicted RBP14.96□□□□□ -0.01
SYNE2-219ENST00000555323 IQCA1Q86XH1 822 aa14.96□□□□□ -0.01
SYNE2-219ENST00000555323 DGKHQ86XP1 1220 aa14.96□□□□□ -0.01
SYNE2-219ENST00000555323 OTUD5Q96G74 571 aa14.96□□□□□ -0.01
SYNE2-219ENST00000555323 TM6SF1Q9BZW5 370 aa14.96□□□□□ -0.01
SYNE2-219ENST00000555323 TMX2Q9Y320 296 aa14.96□□□□□ -0.01
SYNE2-219ENST00000555323 OTOFQ9HC10 1997 aa14.95□□□□□ -0.02
SYNE2-219ENST00000555323 A0A1W2PRG0 241 aa14.95□□□□□ -0.02
SYNE2-219ENST00000555323 USP17L10C9JJH3 530 aa14.95□□□□□ -0.02
SYNE2-219ENST00000555323 TTLL1O95922 423 aa14.95□□□□□ -0.02
SYNE2-219ENST00000555323 EEF2P13639 858 aaKnown RBP14.95□□□□□ -0.02
SYNE2-219ENST00000555323 PSMA5P28066 241 aa14.95□□□□□ -0.02
SYNE2-219ENST00000555323 RBM25P49756 843 aaKnown RBP14.95□□□□□ -0.02
SYNE2-219ENST00000555323 INHBEP58166 350 aa14.95□□□□□ -0.02
SYNE2-219ENST00000555323 ICA1Q05084 483 aa14.95□□□□□ -0.02
SYNE2-219ENST00000555323 NOGQ13253 232 aa14.95□□□□□ -0.02
SYNE2-219ENST00000555323 RCSD1Q6JBY9 416 aa14.95□□□□□ -0.02
SYNE2-219ENST00000555323 CYB5R4Q7L1T6 521 aa14.95□□□□□ -0.02
SYNE2-219ENST00000555323 DHX32Q7L7V1 743 aaKnown RBP14.95□□□□□ -0.02
SYNE2-219ENST00000555323 CAPNS2Q96L46 248 aa14.95□□□□□ -0.02
SYNE2-219ENST00000555323 KIAA1683Q9H0B3 1180 aa14.95□□□□□ -0.02
SYNE2-219ENST00000555323 ZSWIM6Q9HCJ5 1215 aa14.95□□□□□ -0.02
SYNE2-219ENST00000555323 DOCK1Q14185 1865 aa14.95□□□□□ -0.02
SYNE2-219ENST00000555323 WDR19Q8NEZ3 1342 aa14.94□□□□□ -0.02
SYNE2-219ENST00000555323 GREB1LQ9C091 1923 aaPredicted RBP14.94□□□□□ -0.02
SYNE2-219ENST00000555323 A0A0G2JLL6 359 aaPredicted RBP14.94□□□□□ -0.02
SYNE2-219ENST00000555323 NMT2O60551 498 aa14.94□□□□□ -0.02
SYNE2-219ENST00000555323 MCM5P33992 734 aa14.94□□□□□ -0.02
SYNE2-219ENST00000555323 MAP2K2P36507 400 aa14.94□□□□□ -0.02
SYNE2-219ENST00000555323 GTF2A2P52657 109 aa14.94□□□□□ -0.02
SYNE2-219ENST00000555323 ANTXR2P58335 489 aa14.94□□□□□ -0.02
SYNE2-219ENST00000555323 SNAPC2Q13487 334 aa14.94□□□□□ -0.02
SYNE2-219ENST00000555323 COL9A3Q14050 684 aaPredicted RBP14.94□□□□□ -0.02
SYNE2-219ENST00000555323 SEC23AQ15436 765 aa14.94□□□□□ -0.02
SYNE2-219ENST00000555323 PRRT2Q7Z6L0 340 aaPredicted RBP14.94□□□□□ -0.02
SYNE2-219ENST00000555323 REM2Q8IYK8 340 aaPredicted RBP14.94□□□□□ -0.02
SYNE2-219ENST00000555323 FBXL16Q8N461 479 aa14.94□□□□□ -0.02
SYNE2-219ENST00000555323 DNAJC5GQ8N7S2 189 aa14.94□□□□□ -0.02
SYNE2-219ENST00000555323 ACER1Q8TDN7 264 aa14.94□□□□□ -0.02
SYNE2-219ENST00000555323 IGDCC4Q8TDY8 1250 aa14.94□□□□□ -0.02
SYNE2-219ENST00000555323 C12orf42Q96LP6 360 aa14.94□□□□□ -0.02
SYNE2-219ENST00000555323 ZSCAN10Q96SZ4 725 aaPredicted RBP14.94□□□□□ -0.02
SYNE2-219ENST00000555323 C22orf23Q9BZE7 217 aa14.94□□□□□ -0.02
SYNE2-219ENST00000555323 ARHGEF10LQ9HCE6 1279 aa14.94□□□□□ -0.02
SYNE2-219ENST00000555323 WDR33Q9C0J8 1336 aaKnown RBP14.93□□□□□ -0.02
SYNE2-219ENST00000555323 MANSC4A6NHS7 340 aaPredicted RBP14.93□□□□□ -0.02
SYNE2-219ENST00000555323 TM4SF4P48230 202 aa14.93□□□□□ -0.02
SYNE2-219ENST00000555323 VEGFBP49765 207 aa14.93□□□□□ -0.02
SYNE2-219ENST00000555323 USP14P54578 494 aa14.93□□□□□ -0.02
SYNE2-219ENST00000555323 MOGSQ13724 837 aa14.93□□□□□ -0.02
SYNE2-219ENST00000555323 CLEC10AQ8IUN9 316 aa14.93□□□□□ -0.02
SYNE2-219ENST00000555323 TMEM87BQ96K49 555 aa14.93□□□□□ -0.02
SYNE2-219ENST00000555323 SH2D4AQ9H788 454 aa14.93□□□□□ -0.02
SYNE2-219ENST00000555323 UPF2Q9HAU5 1272 aaKnown RBP14.93□□□□□ -0.02
SYNE2-219ENST00000555323 EMILIN3Q9NT22 766 aa14.93□□□□□ -0.02
SYNE2-219ENST00000555323 CLIP2Q9UDT6 1046 aa14.93□□□□□ -0.02
SYNE2-219ENST00000555323 TRIM75PA6NK02 468 aa14.92□□□□□ -0.02
SYNE2-219ENST00000555323 TOP1P11387 765 aaKnown RBP14.92□□□□□ -0.02
SYNE2-219ENST00000555323 CETPP11597 493 aa14.92□□□□□ -0.02
SYNE2-219ENST00000555323 BLOC1S2Q6QNY1 142 aa14.92□□□□□ -0.02
SYNE2-219ENST00000555323 USP17L2Q6R6M4 530 aa14.92□□□□□ -0.02
SYNE2-219ENST00000555323 FASTKD5Q7L8L6 764 aaKnown RBP14.92□□□□□ -0.02
SYNE2-219ENST00000555323 TMTC2Q8N394 836 aa14.92□□□□□ -0.02
SYNE2-219ENST00000555323 ENAHQ8N8S7 591 aaPredicted RBP14.92□□□□□ -0.02
SYNE2-219ENST00000555323 JAKMIP1Q96N16 626 aaKnown RBP14.92□□□□□ -0.02
SYNE2-219ENST00000555323 TMEM47Q9BQJ4 181 aa14.92□□□□□ -0.02
SYNE2-219ENST00000555323 ZKSCAN3Q9BRR0 538 aa14.92□□□□□ -0.02
SYNE2-219ENST00000555323 UBAC1Q9BSL1 405 aa14.92□□□□□ -0.02
SYNE2-219ENST00000555323 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.92□□□□□ -0.02
SYNE2-219ENST00000555323 STX8Q9UNK0 236 aa14.92□□□□□ -0.02
SYNE2-219ENST00000555323 TNKSO95271 1327 aa14.92□□□□□ -0.02
SYNE2-219ENST00000555323 IFIT3O14879 490 aaKnown RBP14.91□□□□□ -0.02
SYNE2-219ENST00000555323 PRC1O43663 620 aa14.91□□□□□ -0.02
SYNE2-219ENST00000555323 RPS6KB1P23443 525 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms