RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 NBPF6Q5VWK0 638 aa5.65□□□□□ -1.5
CPSF2-204ENST00000555244 CEP135Q66GS9 1140 aa5.65□□□□□ -1.5
CPSF2-204ENST00000555244 PRPF40BQ6NWY9 871 aaKnown RBP5.65□□□□□ -1.5
CPSF2-204ENST00000555244 ALYREFQ86V81 257 aaKnown RBP5.65□□□□□ -1.5
CPSF2-204ENST00000555244 CD163Q86VB7 1156 aa5.65□□□□□ -1.5
CPSF2-204ENST00000555244 CACTIN-AS1Q8N1I8 211 aa5.65□□□□□ -1.5
CPSF2-204ENST00000555244 TMEM87AQ8NBN3 555 aa5.65□□□□□ -1.5
CPSF2-204ENST00000555244 ZNF417Q8TAU3 575 aa5.65□□□□□ -1.5
CPSF2-204ENST00000555244 PLD4Q96BZ4 506 aa5.65□□□□□ -1.5
CPSF2-204ENST00000555244 NBPF4Q96M43 638 aa5.65□□□□□ -1.5
CPSF2-204ENST00000555244 ZNF587Q96SQ5 575 aaPredicted RBP5.65□□□□□ -1.5
CPSF2-204ENST00000555244 BACH2Q9BYV9 841 aa5.65□□□□□ -1.5
CPSF2-204ENST00000555244 RASSF4Q9H2L5 321 aa5.65□□□□□ -1.5
CPSF2-204ENST00000555244 PANK3Q9H999 370 aa5.65□□□□□ -1.5
CPSF2-204ENST00000555244 POLKQ9UBT6 870 aa5.65□□□□□ -1.5
CPSF2-204ENST00000555244 RREB1Q92766 1687 aa5.65□□□□□ -1.51
CPSF2-204ENST00000555244 NPC1L1Q9UHC9 1359 aa5.65□□□□□ -1.51
CPSF2-204ENST00000555244 ANKRD26Q9UPS8 1709 aa5.65□□□□□ -1.51
CPSF2-204ENST00000555244 SMG6Q86US8 1419 aaKnown RBP5.65□□□□□ -1.51
CPSF2-204ENST00000555244 TMEM238LA0A1B0GVL6 79 aa5.64□□□□□ -1.51
CPSF2-204ENST00000555244 FAM229AH3BQW9 127 aa5.64□□□□□ -1.51
CPSF2-204ENST00000555244 SCAMP3O14828 347 aaKnown RBP5.64□□□□□ -1.51
CPSF2-204ENST00000555244 RGS9O75916 674 aaPredicted RBP5.64□□□□□ -1.51
CPSF2-204ENST00000555244 RECKO95980 971 aa5.64□□□□□ -1.51
CPSF2-204ENST00000555244 ALBP02768 609 aa5.64□□□□□ -1.51
CPSF2-204ENST00000555244 FURINP09958 794 aa5.64□□□□□ -1.51
CPSF2-204ENST00000555244 USP17L7P0C7H9 530 aa5.64□□□□□ -1.51
CPSF2-204ENST00000555244 ACPPP15309 386 aa5.64□□□□□ -1.51
CPSF2-204ENST00000555244 RRS1Q15050 365 aaKnown RBP5.64□□□□□ -1.51
CPSF2-204ENST00000555244 HSP90AB2PQ58FF8 381 aa5.64□□□□□ -1.51
CPSF2-204ENST00000555244 PERM1Q5SV97 790 aa5.64□□□□□ -1.51
CPSF2-204ENST00000555244 PSAPL1Q6NUJ1 521 aa5.64□□□□□ -1.51
CPSF2-204ENST00000555244 DTHD1Q6ZMT9 781 aa5.64□□□□□ -1.51
CPSF2-204ENST00000555244 CCNJLQ8IV13 435 aa5.64□□□□□ -1.51
CPSF2-204ENST00000555244 ASAP3Q8TDY4 903 aa5.64□□□□□ -1.51
CPSF2-204ENST00000555244 TTC9Q92623 222 aa5.64□□□□□ -1.51
CPSF2-204ENST00000555244 NXPE3Q969Y0 559 aa5.64□□□□□ -1.51
CPSF2-204ENST00000555244 BHLHE41Q9C0J9 482 aaPredicted RBP5.64□□□□□ -1.51
CPSF2-204ENST00000555244 SMG9Q9H0W8 520 aaKnown RBP5.64□□□□□ -1.51
CPSF2-204ENST00000555244 KIF20BQ96Q89 1820 aa5.64□□□□□ -1.51
CPSF2-204ENST00000555244 NFKBIEO00221 500 aa5.63□□□□□ -1.51
CPSF2-204ENST00000555244 ADAM23O75077 832 aa5.63□□□□□ -1.51
CPSF2-204ENST00000555244 TCF3P15923 654 aa5.63□□□□□ -1.51
CPSF2-204ENST00000555244 PTPRAP18433 802 aa5.63□□□□□ -1.51
CPSF2-204ENST00000555244 FCGRTP55899 365 aa5.63□□□□□ -1.51
CPSF2-204ENST00000555244 ATP11AP98196 1134 aa5.63□□□□□ -1.51
CPSF2-204ENST00000555244 PTPN12Q05209 780 aaKnown RBP5.63□□□□□ -1.51
CPSF2-204ENST00000555244 PTF1AQ7RTS3 328 aa5.63□□□□□ -1.51
CPSF2-204ENST00000555244 GLIS3Q8NEA6 775 aa5.63□□□□□ -1.51
CPSF2-204ENST00000555244 ZCRB1Q8TBF4 217 aaKnown RBP5.63□□□□□ -1.51
CPSF2-204ENST00000555244 TCF12Q99081 682 aa5.63□□□□□ -1.51
CPSF2-204ENST00000555244 MDFIQ99750 246 aa5.63□□□□□ -1.51
CPSF2-204ENST00000555244 LPIN3Q9BQK8 851 aa5.63□□□□□ -1.51
CPSF2-204ENST00000555244 ABCB6Q9NP58 842 aa5.63□□□□□ -1.51
CPSF2-204ENST00000555244 STARD13Q9Y3M8 1113 aa5.63□□□□□ -1.51
CPSF2-204ENST00000555244 KIF7Q2M1P5 1343 aa5.63□□□□□ -1.51
CPSF2-204ENST00000555244 MEGF6O75095 1541 aa5.63□□□□□ -1.51
CPSF2-204ENST00000555244 LRP5O75197 1615 aa5.63□□□□□ -1.51
CPSF2-204ENST00000555244 NHSQ6T4R5 1651 aa5.63□□□□□ -1.51
CPSF2-204ENST00000555244 A0A096LPE4 126 aa5.62□□□□□ -1.51
CPSF2-204ENST00000555244 A0A1W2PPZ6 126 aa5.62□□□□□ -1.51
CPSF2-204ENST00000555244 KCNQ2O43526 872 aa5.62□□□□□ -1.51
CPSF2-204ENST00000555244 TRPA1O75762 1119 aa5.62□□□□□ -1.51
CPSF2-204ENST00000555244 TAF1CQ15572 869 aaPredicted RBP5.62□□□□□ -1.51
CPSF2-204ENST00000555244 TXNRD1Q16881 649 aa5.62□□□□□ -1.51
CPSF2-204ENST00000555244 NUDT8Q8WV74 236 aa5.62□□□□□ -1.51
CPSF2-204ENST00000555244 BSNDQ8WZ55 320 aa5.62□□□□□ -1.51
CPSF2-204ENST00000555244 POP1Q99575 1024 aaKnown RBP5.62□□□□□ -1.51
CPSF2-204ENST00000555244 JPH1Q9HDC5 661 aaPredicted RBP5.62□□□□□ -1.51
CPSF2-204ENST00000555244 METTL5Q9NRN9 209 aaKnown RBP5.62□□□□□ -1.51
CPSF2-204ENST00000555244 NAGPAQ9UK23 515 aa5.62□□□□□ -1.51
CPSF2-204ENST00000555244 PPM1HQ9ULR3 514 aa5.62□□□□□ -1.51
CPSF2-204ENST00000555244 AKAP2Q9Y2D5 859 aa5.62□□□□□ -1.51
CPSF2-204ENST00000555244 NUP188Q5SRE5 1749 aa5.62□□□□□ -1.51
CPSF2-204ENST00000555244 K7ELQ4 463 aaPredicted RBP5.61□□□□□ -1.51
CPSF2-204ENST00000555244 CYP27B1O15528 508 aa5.61□□□□□ -1.51
CPSF2-204ENST00000555244 LILRB5O75023 590 aa5.61□□□□□ -1.51
CPSF2-204ENST00000555244 SPATA31C1P0DKV0 1188 aa5.61□□□□□ -1.51
CPSF2-204ENST00000555244 MAP2P11137 1827 aaKnown RBP5.61□□□□□ -1.51
CPSF2-204ENST00000555244 HMGB2P26583 209 aaKnown RBP5.61□□□□□ -1.51
CPSF2-204ENST00000555244 ST13P50502 369 aaKnown RBP5.61□□□□□ -1.51
CPSF2-204ENST00000555244 CABP4P57796 275 aa5.61□□□□□ -1.51
CPSF2-204ENST00000555244 DOC2BQ14184 412 aa5.61□□□□□ -1.51
CPSF2-204ENST00000555244 EIF4A2Q14240 407 aaKnown RBP5.61□□□□□ -1.51
CPSF2-204ENST00000555244 R3HDM1Q15032 1099 aaKnown RBP5.61□□□□□ -1.51
CPSF2-204ENST00000555244 PRRT3Q5FWE3 981 aa5.61□□□□□ -1.51
CPSF2-204ENST00000555244 GDF6Q6KF10 455 aaPredicted RBP5.61□□□□□ -1.51
CPSF2-204ENST00000555244 IGSF1Q8N6C5 1336 aa5.61□□□□□ -1.51
CPSF2-204ENST00000555244 RAPGEF4Q8WZA2 1011 aa5.61□□□□□ -1.51
CPSF2-204ENST00000555244 LTV1Q96GA3 475 aaPredicted RBP5.61□□□□□ -1.51
CPSF2-204ENST00000555244 SHANK3Q9BYB0 1731 aa5.61□□□□□ -1.51
CPSF2-204ENST00000555244 TTF2Q9UNY4 1162 aaKnown RBP5.61□□□□□ -1.51
CPSF2-204ENST00000555244 KNSTRNQ9Y448 316 aa5.61□□□□□ -1.51
CPSF2-204ENST00000555244 KDRP35968 1356 aa5.6□□□□□ -1.51
CPSF2-204ENST00000555244 PCDH11XQ9BZA7 1347 aa5.6□□□□□ -1.51
CPSF2-204ENST00000555244 PCDH11YQ9BZA8 1340 aa5.6□□□□□ -1.51
CPSF2-204ENST00000555244 CTSHP09668 335 aa5.6□□□□□ -1.51
CPSF2-204ENST00000555244 ITPKAP23677 461 aa5.6□□□□□ -1.51
CPSF2-204ENST00000555244 CDC27P30260 824 aa5.6□□□□□ -1.51
CPSF2-204ENST00000555244 ZNF76P36508 570 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms