RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 RBPJLQ9UBG7 517 aa11.79□□□□□ -0.52
TMEM253-204ENST00000554844 STXBP5LQ9Y2K9 1186 aa11.79□□□□□ -0.52
TMEM253-204ENST00000554844 PFASO15067 1338 aa11.79□□□□□ -0.52
TMEM253-204ENST00000554844 PNMA6EA0A0J9YXQ4 647 aa11.78□□□□□ -0.52
TMEM253-204ENST00000554844 IDH1O75874 414 aaKnown RBP11.78□□□□□ -0.52
TMEM253-204ENST00000554844 GH2P01242 217 aa11.78□□□□□ -0.52
TMEM253-204ENST00000554844 TRIM27P14373 513 aa11.78□□□□□ -0.52
TMEM253-204ENST00000554844 CCND3P30281 292 aaPredicted RBP11.78□□□□□ -0.52
TMEM253-204ENST00000554844 MDM2Q00987 491 aaPredicted RBP11.78□□□□□ -0.52
TMEM253-204ENST00000554844 ATP2B2Q01814 1243 aa11.78□□□□□ -0.52
TMEM253-204ENST00000554844 RAB3GAP1Q15042 981 aa11.78□□□□□ -0.52
TMEM253-204ENST00000554844 MORN1Q5T089 497 aa11.78□□□□□ -0.52
TMEM253-204ENST00000554844 Q7L0L9 218 aa11.78□□□□□ -0.52
TMEM253-204ENST00000554844 TTC6Q86TZ1 520 aa11.78□□□□□ -0.52
TMEM253-204ENST00000554844 METTL16Q86W50 562 aaKnown RBP11.78□□□□□ -0.52
TMEM253-204ENST00000554844 CLUAP1Q96AJ1 413 aa11.78□□□□□ -0.52
TMEM253-204ENST00000554844 EDC3Q96F86 508 aaKnown RBP11.78□□□□□ -0.52
TMEM253-204ENST00000554844 DBNDD2Q9BQY9 259 aa11.78□□□□□ -0.52
TMEM253-204ENST00000554844 PORCNQ9H237 461 aa11.78□□□□□ -0.52
TMEM253-204ENST00000554844 DNAJC18Q9H819 358 aa11.78□□□□□ -0.52
TMEM253-204ENST00000554844 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.78□□□□□ -0.52
TMEM253-204ENST00000554844 SIPA1L1O43166 1804 aa11.78□□□□□ -0.52
TMEM253-204ENST00000554844 FOCADQ5VW36 1801 aa11.77□□□□□ -0.52
TMEM253-204ENST00000554844 SLC15A5A6NIM6 579 aa11.77□□□□□ -0.53
TMEM253-204ENST00000554844 PEX10O60683 326 aa11.77□□□□□ -0.53
TMEM253-204ENST00000554844 SURF6O75683 361 aaKnown RBP11.77□□□□□ -0.53
TMEM253-204ENST00000554844 CYP2E1P05181 493 aaPredicted RBP11.77□□□□□ -0.53
TMEM253-204ENST00000554844 ZAP70P43403 619 aa11.77□□□□□ -0.53
TMEM253-204ENST00000554844 CCL14Q16627 93 aa11.77□□□□□ -0.53
TMEM253-204ENST00000554844 LRRC26Q2I0M4 334 aa11.77□□□□□ -0.53
TMEM253-204ENST00000554844 Q3C1V9 767 aa11.77□□□□□ -0.53
TMEM253-204ENST00000554844 SENP6Q9GZR1 1112 aaPredicted RBP11.77□□□□□ -0.53
TMEM253-204ENST00000554844 EMILIN3Q9NT22 766 aa11.77□□□□□ -0.53
TMEM253-204ENST00000554844 SERPINB13Q9UIV8 391 aa11.77□□□□□ -0.53
TMEM253-204ENST00000554844 CDK5RAP2Q96SN8 1893 aa11.76□□□□□ -0.53
TMEM253-204ENST00000554844 COL6A1P12109 1028 aa11.76□□□□□ -0.53
TMEM253-204ENST00000554844 DYNLL1P63167 89 aaKnown RBP11.76□□□□□ -0.53
TMEM253-204ENST00000554844 MAP3K12Q12852 859 aa11.76□□□□□ -0.53
TMEM253-204ENST00000554844 ABCB5Q2M3G0 1257 aa11.76□□□□□ -0.53
TMEM253-204ENST00000554844 CERKLQ49MI3 558 aaPredicted RBP11.76□□□□□ -0.53
TMEM253-204ENST00000554844 TMED8Q6PL24 325 aaPredicted RBP11.76□□□□□ -0.53
TMEM253-204ENST00000554844 ADGRA1Q86SQ6 560 aa11.76□□□□□ -0.53
TMEM253-204ENST00000554844 FTSJ3Q8IY81 847 aaKnown RBP11.76□□□□□ -0.53
TMEM253-204ENST00000554844 USP6NLQ92738 828 aa11.76□□□□□ -0.53
TMEM253-204ENST00000554844 ZNF512BQ96KM6 892 aaPredicted RBP11.76□□□□□ -0.53
TMEM253-204ENST00000554844 C12orf42Q96LP6 360 aa11.76□□□□□ -0.53
TMEM253-204ENST00000554844 MTMR10Q9NXD2 777 aa11.76□□□□□ -0.53
TMEM253-204ENST00000554844 DDX20Q9UHI6 824 aaKnown RBP11.76□□□□□ -0.53
TMEM253-204ENST00000554844 NDUFB9Q9Y6M9 179 aa11.76□□□□□ -0.53
TMEM253-204ENST00000554844 MYH1P12882 1939 aa11.76□□□□□ -0.53
TMEM253-204ENST00000554844 CUL9Q8IWT3 2517 aa11.75□□□□□ -0.53
TMEM253-204ENST00000554844 KBTBD13C9JR72 458 aa11.75□□□□□ -0.53
TMEM253-204ENST00000554844 POLR3DP05423 398 aaPredicted RBP11.75□□□□□ -0.53
TMEM253-204ENST00000554844 VCAM1P19320 739 aa11.75□□□□□ -0.53
TMEM253-204ENST00000554844 PTPREP23469 700 aa11.75□□□□□ -0.53
TMEM253-204ENST00000554844 JAG1P78504 1218 aa11.75□□□□□ -0.53
TMEM253-204ENST00000554844 SHROOM1Q2M3G4 852 aaPredicted RBP11.75□□□□□ -0.53
TMEM253-204ENST00000554844 ZKSCAN2Q63HK3 967 aa11.75□□□□□ -0.53
TMEM253-204ENST00000554844 LHX8Q68G74 356 aa11.75□□□□□ -0.53
TMEM253-204ENST00000554844 CATSPERGQ6ZRH7 1159 aa11.75□□□□□ -0.53
TMEM253-204ENST00000554844 DPP9Q86TI2 863 aa11.75□□□□□ -0.53
TMEM253-204ENST00000554844 MAGEB6Q8N7X4 407 aa11.75□□□□□ -0.53
TMEM253-204ENST00000554844 MIGA1Q8NAN2 632 aa11.75□□□□□ -0.53
TMEM253-204ENST00000554844 LPAR1Q92633 364 aa11.75□□□□□ -0.53
TMEM253-204ENST00000554844 KIAA1683Q9H0B3 1180 aa11.75□□□□□ -0.53
TMEM253-204ENST00000554844 EHD4Q9H223 541 aa11.75□□□□□ -0.53
TMEM253-204ENST00000554844 PIH1D3Q9NQM4 214 aaKnown RBP11.75□□□□□ -0.53
TMEM253-204ENST00000554844 SLC5A4Q9NY91 659 aa11.75□□□□□ -0.53
TMEM253-204ENST00000554844 LAMA3Q16787 3333 aa11.74□□□□□ -0.53
TMEM253-204ENST00000554844 DNM1LO00429 736 aa11.74□□□□□ -0.53
TMEM253-204ENST00000554844 MPHOSPH10O00566 681 aaKnown RBP11.74□□□□□ -0.53
TMEM253-204ENST00000554844 ATN1P54259 1190 aaPredicted RBP11.74□□□□□ -0.53
TMEM253-204ENST00000554844 ATP8B2P98198 1209 aa11.74□□□□□ -0.53
TMEM253-204ENST00000554844 ZNF697Q5TEC3 545 aa11.74□□□□□ -0.53
TMEM253-204ENST00000554844 TATDN1Q6P1N9 297 aa11.74□□□□□ -0.53
TMEM253-204ENST00000554844 ARRDC4Q8NCT1 418 aa11.74□□□□□ -0.53
TMEM253-204ENST00000554844 CCDC8Q9H0W5 538 aaPredicted RBP11.74□□□□□ -0.53
TMEM253-204ENST00000554844 RPAP3Q9H6T3 665 aaPredicted RBP11.74□□□□□ -0.53
TMEM253-204ENST00000554844 BCAR3O75815 825 aa11.73□□□□□ -0.53
TMEM253-204ENST00000554844 GRB14Q14449 540 aa11.73□□□□□ -0.53
TMEM253-204ENST00000554844 FRMPD3Q5JV73 1810 aa11.73□□□□□ -0.53
TMEM253-204ENST00000554844 LBX2Q6XYB7 198 aa11.73□□□□□ -0.53
TMEM253-204ENST00000554844 ERC1Q8IUD2 1116 aa11.73□□□□□ -0.53
TMEM253-204ENST00000554844 ITPRIPQ8IWB1 547 aa11.73□□□□□ -0.53
TMEM253-204ENST00000554844 TMEM57Q8N5G2 664 aa11.73□□□□□ -0.53
TMEM253-204ENST00000554844 SSH3Q8TE77 659 aa11.73□□□□□ -0.53
TMEM253-204ENST00000554844 CRNKL1Q9BZJ0 848 aaKnown RBP11.73□□□□□ -0.53
TMEM253-204ENST00000554844 TANGO6Q9C0B7 1094 aa11.73□□□□□ -0.53
TMEM253-204ENST00000554844 ATP11BQ9Y2G3 1177 aa11.73□□□□□ -0.53
TMEM253-204ENST00000554844 COL6A3P12111 3177 aa11.73□□□□□ -0.53
TMEM253-204ENST00000554844 MAGEB6P1A0A0J9YX57 407 aa11.72□□□□□ -0.53
TMEM253-204ENST00000554844 SPDYE16A6NNV3 312 aaPredicted RBP11.72□□□□□ -0.53
TMEM253-204ENST00000554844 STRNO43815 780 aa11.72□□□□□ -0.53
TMEM253-204ENST00000554844 CNMDO75829 334 aa11.72□□□□□ -0.53
TMEM253-204ENST00000554844 HOXC6P09630 235 aa11.72□□□□□ -0.53
TMEM253-204ENST00000554844 CYP2C19P33261 490 aa11.72□□□□□ -0.53
TMEM253-204ENST00000554844 RTP1P59025 263 aa11.72□□□□□ -0.53
TMEM253-204ENST00000554844 TTF1Q15361 905 aaPredicted RBP11.72□□□□□ -0.53
TMEM253-204ENST00000554844 FAM109BQ6ICB4 259 aaPredicted RBP11.72□□□□□ -0.53
TMEM253-204ENST00000554844 C1orf115Q9H7X2 142 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms