RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 SEC62Q99442 399 aaKnown RBP12.77□□□□□ -0.37
SHMT2-213ENST00000554600 ASCC2Q9H1I8 757 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-213ENST00000554600 ARPP21Q9UBL0 812 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-213ENST00000554600 GSG1L2A8MUP6 293 aa12.76□□□□□ -0.37
SHMT2-213ENST00000554600 SMIM22K7EJ46 135 aa12.76□□□□□ -0.37
SHMT2-213ENST00000554600 HOXD10P28358 340 aa12.76□□□□□ -0.37
SHMT2-213ENST00000554600 USP14P54578 494 aa12.76□□□□□ -0.37
SHMT2-213ENST00000554600 FCGRTP55899 365 aa12.76□□□□□ -0.37
SHMT2-213ENST00000554600 NUCB1Q02818 461 aa12.76□□□□□ -0.37
SHMT2-213ENST00000554600 ZMYM1Q5SVZ6 1142 aa12.76□□□□□ -0.37
SHMT2-213ENST00000554600 ANKRD13CQ8N6S4 541 aa12.76□□□□□ -0.37
SHMT2-213ENST00000554600 ACER1Q8TDN7 264 aa12.76□□□□□ -0.37
SHMT2-213ENST00000554600 RILPL2Q969X0 211 aa12.76□□□□□ -0.37
SHMT2-213ENST00000554600 TRIM47Q96LD4 638 aa12.76□□□□□ -0.37
SHMT2-213ENST00000554600 NACAP1Q9BZK3 213 aa12.76□□□□□ -0.37
SHMT2-213ENST00000554600 PTCH2Q9Y6C5 1203 aa12.76□□□□□ -0.37
SHMT2-213ENST00000554600 COL11A1P12107 1806 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-213ENST00000554600 PARP14Q460N5 1801 aa12.76□□□□□ -0.37
SHMT2-213ENST00000554600 GNRH1P01148 92 aa12.75□□□□□ -0.37
SHMT2-213ENST00000554600 AKR1B1P15121 316 aa12.75□□□□□ -0.37
SHMT2-213ENST00000554600 GCLCP48506 637 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-213ENST00000554600 ATP2B2Q01814 1243 aa12.75□□□□□ -0.37
SHMT2-213ENST00000554600 SLC9C1Q4G0N8 1177 aa12.75□□□□□ -0.37
SHMT2-213ENST00000554600 TMEM179Q6ZVK1 233 aa12.75□□□□□ -0.37
SHMT2-213ENST00000554600 C16orf86Q6ZW13 317 aa12.75□□□□□ -0.37
SHMT2-213ENST00000554600 RBBP6Q7Z6E9 1792 aaKnown RBP12.75□□□□□ -0.37
SHMT2-213ENST00000554600 MYPNQ86TC9 1320 aa12.75□□□□□ -0.37
SHMT2-213ENST00000554600 GREB1LQ9C091 1923 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-213ENST00000554600 EMILIN3Q9NT22 766 aa12.75□□□□□ -0.37
SHMT2-213ENST00000554600 ZNFX1Q9P2E3 1918 aaKnown RBP12.75□□□□□ -0.37
SHMT2-213ENST00000554600 TNPO2O14787 897 aaKnown RBP12.74□□□□□ -0.37
SHMT2-213ENST00000554600 MYCP01106 439 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-213ENST00000554600 CTGFP29279 349 aa12.74□□□□□ -0.37
SHMT2-213ENST00000554600 GUCY1A2P33402 732 aa12.74□□□□□ -0.37
SHMT2-213ENST00000554600 ICA1Q05084 483 aa12.74□□□□□ -0.37
SHMT2-213ENST00000554600 GIMAP6Q6P9H5 292 aa12.74□□□□□ -0.37
SHMT2-213ENST00000554600 CCDC129Q6ZRS4 1044 aa12.74□□□□□ -0.37
SHMT2-213ENST00000554600 CLEC10AQ8IUN9 316 aa12.74□□□□□ -0.37
SHMT2-213ENST00000554600 PLEKHM2Q8IWE5 1019 aa12.74□□□□□ -0.37
SHMT2-213ENST00000554600 IFNL3Q8IZI9 196 aa12.74□□□□□ -0.37
SHMT2-213ENST00000554600 RAET1EQ8TD07 263 aa12.74□□□□□ -0.37
SHMT2-213ENST00000554600 CCDC17Q96LX7 622 aa12.74□□□□□ -0.37
SHMT2-213ENST00000554600 P2RX7Q99572 595 aaKnown RBP12.74□□□□□ -0.37
SHMT2-213ENST00000554600 PAGR1Q9BTK6 254 aa12.74□□□□□ -0.37
SHMT2-213ENST00000554600 KIAA1683Q9H0B3 1180 aa12.74□□□□□ -0.37
SHMT2-213ENST00000554600 NAPBQ9H115 298 aa12.74□□□□□ -0.37
SHMT2-213ENST00000554600 MKNK2Q9HBH9 465 aa12.74□□□□□ -0.37
SHMT2-213ENST00000554600 ARHGEF10LQ9HCE6 1279 aa12.74□□□□□ -0.37
SHMT2-213ENST00000554600 EPB41L4AQ9HCS5 686 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-213ENST00000554600 SRRDQ9UH36 339 aa12.74□□□□□ -0.37
SHMT2-213ENST00000554600 TAOK2Q9UL54 1235 aa12.74□□□□□ -0.37
SHMT2-213ENST00000554600 RLFQ13129 1914 aa12.73□□□□□ -0.37
SHMT2-213ENST00000554600 USP17L15C9J2P7 530 aa12.73□□□□□ -0.37
SHMT2-213ENST00000554600 PATL2C9JE40 543 aaKnown RBP12.73□□□□□ -0.37
SHMT2-213ENST00000554600 USP17L13C9JLJ4 530 aa12.73□□□□□ -0.37
SHMT2-213ENST00000554600 USP17L11C9JVI0 530 aa12.73□□□□□ -0.37
SHMT2-213ENST00000554600 USP17L18D6R9N7 530 aa12.73□□□□□ -0.37
SHMT2-213ENST00000554600 USP17L22D6RA61 530 aa12.73□□□□□ -0.37
SHMT2-213ENST00000554600 USP17L17D6RBQ6 530 aa12.73□□□□□ -0.37
SHMT2-213ENST00000554600 USP17L19D6RCP7 530 aa12.73□□□□□ -0.37
SHMT2-213ENST00000554600 USP17L20D6RJB6 530 aa12.73□□□□□ -0.37
SHMT2-213ENST00000554600 RAD21O60216 631 aa12.73□□□□□ -0.37
SHMT2-213ENST00000554600 HOXA7P31268 230 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-213ENST00000554600 PRMT2P55345 433 aa12.73□□□□□ -0.37
SHMT2-213ENST00000554600 HERVK_113P62684 666 aa12.73□□□□□ -0.37
SHMT2-213ENST00000554600 USP17L24Q0WX57 530 aa12.73□□□□□ -0.37
SHMT2-213ENST00000554600 FAM110CQ1W6H9 321 aa12.73□□□□□ -0.37
SHMT2-213ENST00000554600 SBK1Q52WX2 424 aa12.73□□□□□ -0.37
SHMT2-213ENST00000554600 NBPF11Q86T75 865 aa12.73□□□□□ -0.37
SHMT2-213ENST00000554600 CCAR1Q8IX12 1150 aaKnown RBP12.73□□□□□ -0.37
SHMT2-213ENST00000554600 SH2D4AQ9H788 454 aa12.73□□□□□ -0.37
SHMT2-213ENST00000554600 BIN2Q9UBW5 565 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-213ENST00000554600 PLXNB2O15031 1838 aa12.73□□□□□ -0.37
SHMT2-213ENST00000554600 SLC3A2P08195 630 aaKnown RBP12.72□□□□□ -0.37
SHMT2-213ENST00000554600 VCAM1P19320 739 aa12.72□□□□□ -0.37
SHMT2-213ENST00000554600 PRKCZQ05513 592 aa12.72□□□□□ -0.37
SHMT2-213ENST00000554600 SAMD1Q6SPF0 538 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-213ENST00000554600 SH3TC2Q8TF17 1288 aa12.72□□□□□ -0.37
SHMT2-213ENST00000554600 COA7Q96BR5 231 aa12.72□□□□□ -0.37
SHMT2-213ENST00000554600 C12orf42Q96LP6 360 aa12.72□□□□□ -0.37
SHMT2-213ENST00000554600 TANGO6Q9C0B7 1094 aa12.72□□□□□ -0.37
SHMT2-213ENST00000554600 RPAP3Q9H6T3 665 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-213ENST00000554600 ZNF287Q9HBT7 754 aa12.72□□□□□ -0.37
SHMT2-213ENST00000554600 CWC22Q9HCG8 908 aaKnown RBP12.72□□□□□ -0.37
SHMT2-213ENST00000554600 HELLSQ9NRZ9 838 aa12.72□□□□□ -0.37
SHMT2-213ENST00000554600 A0A0D9SFI3 127 aa12.71□□□□□ -0.37
SHMT2-213ENST00000554600 PRDM1O75626 825 aa12.71□□□□□ -0.37
SHMT2-213ENST00000554600 NMIQ13287 307 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-213ENST00000554600 PRPF38BQ5VTL8 546 aaKnown RBP12.71□□□□□ -0.37
SHMT2-213ENST00000554600 ZNF444Q8N0Y2 327 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-213ENST00000554600 FAM227BQ96M60 508 aa12.71□□□□□ -0.37
SHMT2-213ENST00000554600 TMEM106CQ9BVX2 250 aa12.71□□□□□ -0.37
SHMT2-213ENST00000554600 GABRQQ9UN88 632 aa12.71□□□□□ -0.37
SHMT2-213ENST00000554600 ROBO3Q96MS0 1386 aa12.7□□□□□ -0.38
SHMT2-213ENST00000554600 LAMA4Q16363 1823 aa12.7□□□□□ -0.38
SHMT2-213ENST00000554600 A0A1W2PRG0 241 aa12.7□□□□□ -0.38
SHMT2-213ENST00000554600 PEX10O60683 326 aa12.7□□□□□ -0.38
SHMT2-213ENST00000554600 EEF2P13639 858 aaKnown RBP12.7□□□□□ -0.38
SHMT2-213ENST00000554600 RASA1P20936 1047 aa12.7□□□□□ -0.38
SHMT2-213ENST00000554600 PDE4BQ07343 736 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms