RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 ATP11AP98196 1134 aa8.23□□□□□ -1.09
SCFD1-212ENST00000554486 COL9A3Q14050 684 aaPredicted RBP8.23□□□□□ -1.09
SCFD1-212ENST00000554486 AMOTQ4VCS5 1084 aa8.23□□□□□ -1.09
SCFD1-212ENST00000554486 PLEKHO1Q53GL0 409 aaPredicted RBP8.23□□□□□ -1.09
SCFD1-212ENST00000554486 ZNF530Q6P9A1 599 aaPredicted RBP8.23□□□□□ -1.09
SCFD1-212ENST00000554486 GIPC2Q8TF65 315 aa8.23□□□□□ -1.09
SCFD1-212ENST00000554486 YTHDC1Q96MU7 727 aaKnown RBP8.23□□□□□ -1.09
SCFD1-212ENST00000554486 LPIN3Q9BQK8 851 aa8.23□□□□□ -1.09
SCFD1-212ENST00000554486 RBSNQ9H1K0 784 aa8.23□□□□□ -1.09
SCFD1-212ENST00000554486 DZANK1Q9NVP4 752 aa8.23□□□□□ -1.09
SCFD1-212ENST00000554486 VIRMAQ69YN4 1812 aaKnown RBP8.23□□□□□ -1.09
SCFD1-212ENST00000554486 THSD7AQ9UPZ6 1657 aa8.23□□□□□ -1.09
SCFD1-212ENST00000554486 LRRC37A3O60309 1634 aa8.22□□□□□ -1.09
SCFD1-212ENST00000554486 UNCXA6NJT0 531 aa8.22□□□□□ -1.09
SCFD1-212ENST00000554486 C1QTNF9BB2RNN3 333 aa8.22□□□□□ -1.09
SCFD1-212ENST00000554486 CYP27B1O15528 508 aa8.22□□□□□ -1.09
SCFD1-212ENST00000554486 PRPF40AO75400 957 aaKnown RBP8.22□□□□□ -1.09
SCFD1-212ENST00000554486 ITGB2P05107 769 aa8.22□□□□□ -1.09
SCFD1-212ENST00000554486 RIPK4P57078 832 aa8.22□□□□□ -1.09
SCFD1-212ENST00000554486 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.22□□□□□ -1.09
SCFD1-212ENST00000554486 ZNF772Q68DY9 489 aaPredicted RBP8.22□□□□□ -1.09
SCFD1-212ENST00000554486 ZCRB1Q8TBF4 217 aaKnown RBP8.22□□□□□ -1.09
SCFD1-212ENST00000554486 TTC9Q92623 222 aa8.22□□□□□ -1.09
SCFD1-212ENST00000554486 DUSP9Q99956 384 aaKnown RBP8.22□□□□□ -1.09
SCFD1-212ENST00000554486 ZKSCAN3Q9BRR0 538 aa8.22□□□□□ -1.09
SCFD1-212ENST00000554486 RASSF4Q9H2L5 321 aa8.22□□□□□ -1.09
SCFD1-212ENST00000554486 SPG7Q9UQ90 795 aa8.22□□□□□ -1.09
SCFD1-212ENST00000554486 ZNF521Q96K83 1311 aa8.22□□□□□ -1.09
SCFD1-212ENST00000554486 TNS2Q63HR2 1409 aa8.21□□□□□ -1.09
SCFD1-212ENST00000554486 GHRHP01286 108 aa8.21□□□□□ -1.1
SCFD1-212ENST00000554486 AFF1P51825 1210 aaKnown RBP8.21□□□□□ -1.1
SCFD1-212ENST00000554486 RAC1P63000 192 aa8.21□□□□□ -1.1
SCFD1-212ENST00000554486 KIAA0319Q5VV43 1072 aa8.21□□□□□ -1.1
SCFD1-212ENST00000554486 CD163Q86VB7 1156 aa8.21□□□□□ -1.1
SCFD1-212ENST00000554486 NCAPG2Q86XI2 1143 aa8.21□□□□□ -1.1
SCFD1-212ENST00000554486 NGEFQ8N5V2 710 aa8.21□□□□□ -1.1
SCFD1-212ENST00000554486 GLIS3Q8NEA6 775 aa8.21□□□□□ -1.1
SCFD1-212ENST00000554486 ZBED9Q6R2W3 1325 aa8.21□□□□□ -1.1
SCFD1-212ENST00000554486 MAP3K5Q99683 1374 aa8.21□□□□□ -1.1
SCFD1-212ENST00000554486 ADAMTS7Q9UKP4 1686 aa8.21□□□□□ -1.1
SCFD1-212ENST00000554486 SCN11AQ9UI33 1791 aa8.2□□□□□ -1.1
SCFD1-212ENST00000554486 EXOC5O00471 708 aa8.2□□□□□ -1.1
SCFD1-212ENST00000554486 PROCP04070 461 aa8.2□□□□□ -1.1
SCFD1-212ENST00000554486 EDN3P14138 238 aa8.2□□□□□ -1.1
SCFD1-212ENST00000554486 PHKG2P15735 406 aa8.2□□□□□ -1.1
SCFD1-212ENST00000554486 EIF2AK2P19525 551 aaKnown RBP8.2□□□□□ -1.1
SCFD1-212ENST00000554486 DCTN1Q14203 1278 aa8.2□□□□□ -1.1
SCFD1-212ENST00000554486 GRIK5Q16478 980 aa8.2□□□□□ -1.1
SCFD1-212ENST00000554486 AKAP4Q5JQC9 854 aa8.2□□□□□ -1.1
SCFD1-212ENST00000554486 ALG1LQ6GMV1 187 aa8.2□□□□□ -1.1
SCFD1-212ENST00000554486 IL17REQ8NFR9 667 aa8.2□□□□□ -1.1
SCFD1-212ENST00000554486 FBF1Q8TES7 1133 aa8.2□□□□□ -1.1
SCFD1-212ENST00000554486 TCF12Q99081 682 aa8.2□□□□□ -1.1
SCFD1-212ENST00000554486 OSMRQ99650 979 aa8.2□□□□□ -1.1
SCFD1-212ENST00000554486 THUMPD2Q9BTF0 503 aaKnown RBP8.2□□□□□ -1.1
SCFD1-212ENST00000554486 OSBPL7Q9BZF2 842 aa8.2□□□□□ -1.1
SCFD1-212ENST00000554486 PARP2Q9UGN5 583 aa8.2□□□□□ -1.1
SCFD1-212ENST00000554486 KAT6BQ8WYB5 2073 aa8.2□□□□□ -1.1
SCFD1-212ENST00000554486 KDM6AO15550 1401 aaPredicted RBP8.2□□□□□ -1.1
SCFD1-212ENST00000554486 BRWD3Q6RI45 1802 aa8.19□□□□□ -1.1
SCFD1-212ENST00000554486 GNAT3A8MTJ3 354 aa8.19□□□□□ -1.1
SCFD1-212ENST00000554486 HTATSF1O43719 755 aaKnown RBP8.19□□□□□ -1.1
SCFD1-212ENST00000554486 RBM6P78332 1123 aaKnown RBP8.19□□□□□ -1.1
SCFD1-212ENST00000554486 LMOD3Q0VAK6 560 aa8.19□□□□□ -1.1
SCFD1-212ENST00000554486 GRM2Q14416 872 aa8.19□□□□□ -1.1
SCFD1-212ENST00000554486 DDB1Q16531 1140 aa8.19□□□□□ -1.1
SCFD1-212ENST00000554486 C1orf141Q5JVX7 400 aa8.19□□□□□ -1.1
SCFD1-212ENST00000554486 ILDR2Q71H61 639 aa8.19□□□□□ -1.1
SCFD1-212ENST00000554486 MCM10Q7L590 875 aa8.19□□□□□ -1.1
SCFD1-212ENST00000554486 IFNL2Q8IZJ0 200 aa8.19□□□□□ -1.1
SCFD1-212ENST00000554486 DDX54Q8TDD1 881 aaKnown RBP8.19□□□□□ -1.1
SCFD1-212ENST00000554486 PLD4Q96BZ4 506 aa8.19□□□□□ -1.1
SCFD1-212ENST00000554486 FAM161BQ96MY7 647 aa8.19□□□□□ -1.1
SCFD1-212ENST00000554486 POP1Q99575 1024 aaKnown RBP8.19□□□□□ -1.1
SCFD1-212ENST00000554486 PBX4Q9BYU1 374 aa8.19□□□□□ -1.1
SCFD1-212ENST00000554486 SMG9Q9H0W8 520 aaKnown RBP8.19□□□□□ -1.1
SCFD1-212ENST00000554486 LGR6Q9HBX8 967 aa8.19□□□□□ -1.1
SCFD1-212ENST00000554486 PCDH11XQ9BZA7 1347 aa8.19□□□□□ -1.1
SCFD1-212ENST00000554486 PCDH11YQ9BZA8 1340 aa8.19□□□□□ -1.1
SCFD1-212ENST00000554486 TOGARAM1Q9Y4F4 1720 aa8.18□□□□□ -1.1
SCFD1-212ENST00000554486 A0A0A0MRY4 1105 aa8.18□□□□□ -1.1
SCFD1-212ENST00000554486 C9orf172C9J069 976 aa8.18□□□□□ -1.1
SCFD1-212ENST00000554486 RNMTO43148 476 aaKnown RBP8.18□□□□□ -1.1
SCFD1-212ENST00000554486 CHRNA4P43681 627 aa8.18□□□□□ -1.1
SCFD1-212ENST00000554486 GATA4P43694 442 aa8.18□□□□□ -1.1
SCFD1-212ENST00000554486 DAB2P98082 770 aa8.18□□□□□ -1.1
SCFD1-212ENST00000554486 ATP2B2Q01814 1243 aa8.18□□□□□ -1.1
SCFD1-212ENST00000554486 MSL1Q68DK7 614 aa8.18□□□□□ -1.1
SCFD1-212ENST00000554486 MPRIPQ6WCQ1 1025 aa8.18□□□□□ -1.1
SCFD1-212ENST00000554486 DMRTC2Q8IXT2 367 aaPredicted RBP8.18□□□□□ -1.1
SCFD1-212ENST00000554486 MARCH10Q8NA82 808 aaPredicted RBP8.18□□□□□ -1.1
SCFD1-212ENST00000554486 NXPE3Q969Y0 559 aa8.18□□□□□ -1.1
SCFD1-212ENST00000554486 SPACA7Q96KW9 195 aa8.18□□□□□ -1.1
SCFD1-212ENST00000554486 CEMIPQ8WUJ3 1361 aa8.18□□□□□ -1.1
SCFD1-212ENST00000554486 SIPA1L3O60292 1781 aaPredicted RBP8.17□□□□□ -1.1
SCFD1-212ENST00000554486 METTL12A8MUP2 240 aa8.17□□□□□ -1.1
SCFD1-212ENST00000554486 FAM229AH3BQW9 127 aa8.17□□□□□ -1.1
SCFD1-212ENST00000554486 ELNP15502 786 aa8.17□□□□□ -1.1
SCFD1-212ENST00000554486 RXRBP28702 533 aa8.17□□□□□ -1.1
SCFD1-212ENST00000554486 BAG6P46379 1132 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms