RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 LY75O60449 1722 aa7.45□□□□□ -1.22
VPS33B-203ENST00000554264 KRBA1A5PL33 1030 aa7.45□□□□□ -1.22
VPS33B-203ENST00000554264 RNF225M0QZC1 329 aaPredicted RBP7.45□□□□□ -1.22
VPS33B-203ENST00000554264 EIF1AYO14602 144 aaKnown RBP7.45□□□□□ -1.22
VPS33B-203ENST00000554264 TRAPPC3LQ5T215 181 aa7.45□□□□□ -1.22
VPS33B-203ENST00000554264 CEP135Q66GS9 1140 aa7.45□□□□□ -1.22
VPS33B-203ENST00000554264 NPM2Q86SE8 214 aaKnown RBP7.45□□□□□ -1.22
VPS33B-203ENST00000554264 TRMT2AQ8IZ69 625 aaKnown RBP7.45□□□□□ -1.22
VPS33B-203ENST00000554264 ZNF526Q8TF50 670 aaPredicted RBP7.45□□□□□ -1.22
VPS33B-203ENST00000554264 ALKBH8Q96BT7 664 aaKnown RBP7.45□□□□□ -1.22
VPS33B-203ENST00000554264 LTV1Q96GA3 475 aaPredicted RBP7.45□□□□□ -1.22
VPS33B-203ENST00000554264 SPACA7Q96KW9 195 aa7.45□□□□□ -1.22
VPS33B-203ENST00000554264 CRBNQ96SW2 442 aa7.45□□□□□ -1.22
VPS33B-203ENST00000554264 ZKSCAN3Q9BRR0 538 aa7.45□□□□□ -1.22
VPS33B-203ENST00000554264 GZF1Q9H116 711 aaPredicted RBP7.45□□□□□ -1.22
VPS33B-203ENST00000554264 TERF2IPQ9NYB0 399 aa7.45□□□□□ -1.22
VPS33B-203ENST00000554264 LTN1O94822 1766 aa7.45□□□□□ -1.22
VPS33B-203ENST00000554264 TUBGCP6Q96RT7 1819 aa7.45□□□□□ -1.22
VPS33B-203ENST00000554264 CD163L1Q9NR16 1453 aa7.44□□□□□ -1.22
VPS33B-203ENST00000554264 KAT6BQ8WYB5 2073 aa7.44□□□□□ -1.22
VPS33B-203ENST00000554264 A0A0A0MRY4 1105 aa7.44□□□□□ -1.22
VPS33B-203ENST00000554264 TREHO43280 583 aa7.44□□□□□ -1.22
VPS33B-203ENST00000554264 GDF11O95390 407 aa7.44□□□□□ -1.22
VPS33B-203ENST00000554264 PPP2R1AP30153 589 aa7.44□□□□□ -1.22
VPS33B-203ENST00000554264 DUSP27Q5VZP5 1158 aa7.44□□□□□ -1.22
VPS33B-203ENST00000554264 GALNT12Q8IXK2 581 aa7.44□□□□□ -1.22
VPS33B-203ENST00000554264 IL22RA1Q8N6P7 574 aa7.44□□□□□ -1.22
VPS33B-203ENST00000554264 DMRTB1Q96MA1 342 aa7.44□□□□□ -1.22
VPS33B-203ENST00000554264 OSMRQ99650 979 aa7.44□□□□□ -1.22
VPS33B-203ENST00000554264 LACRTQ9GZZ8 138 aa7.44□□□□□ -1.22
VPS33B-203ENST00000554264 CEP350Q5VT06 3117 aa7.44□□□□□ -1.22
VPS33B-203ENST00000554264 DOT1LQ8TEK3 1739 aa7.44□□□□□ -1.22
VPS33B-203ENST00000554264 HOXC9P31274 260 aa7.43□□□□□ -1.22
VPS33B-203ENST00000554264 AMPHP49418 695 aa7.43□□□□□ -1.22
VPS33B-203ENST00000554264 SLFN5Q08AF3 891 aa7.43□□□□□ -1.22
VPS33B-203ENST00000554264 ASB16Q96NS5 453 aa7.43□□□□□ -1.22
VPS33B-203ENST00000554264 PUS7Q96PZ0 661 aaKnown RBP7.43□□□□□ -1.22
VPS33B-203ENST00000554264 RBSNQ9H1K0 784 aa7.43□□□□□ -1.22
VPS33B-203ENST00000554264 UPF2Q9HAU5 1272 aaKnown RBP7.43□□□□□ -1.22
VPS33B-203ENST00000554264 SH2B1Q9NRF2 756 aaPredicted RBP7.43□□□□□ -1.22
VPS33B-203ENST00000554264 IGSF1Q8N6C5 1336 aa7.43□□□□□ -1.22
VPS33B-203ENST00000554264 NSD3Q9BZ95 1437 aa7.43□□□□□ -1.22
VPS33B-203ENST00000554264 MEGF6O75095 1541 aa7.42□□□□□ -1.22
VPS33B-203ENST00000554264 GOLGB1Q14789 3259 aaKnown RBP7.42□□□□□ -1.22
VPS33B-203ENST00000554264 EIF5BO60841 1220 aaKnown RBP7.42□□□□□ -1.22
VPS33B-203ENST00000554264 CPNE3O75131 537 aaKnown RBP7.42□□□□□ -1.22
VPS33B-203ENST00000554264 DEAF1O75398 565 aaPredicted RBP7.42□□□□□ -1.22
VPS33B-203ENST00000554264 CT47B1P0C2W7 299 aaPredicted RBP7.42□□□□□ -1.22
VPS33B-203ENST00000554264 PLCB3Q01970 1234 aa7.42□□□□□ -1.22
VPS33B-203ENST00000554264 CC2D1BQ5T0F9 858 aaKnown RBP7.42□□□□□ -1.22
VPS33B-203ENST00000554264 L1TD1Q5T7N2 865 aaKnown RBP7.42□□□□□ -1.22
VPS33B-203ENST00000554264 WFDC8Q8IUA0 241 aa7.42□□□□□ -1.22
VPS33B-203ENST00000554264 TMEM151AQ8N4L1 468 aa7.42□□□□□ -1.22
VPS33B-203ENST00000554264 RAPGEF4Q8WZA2 1011 aa7.42□□□□□ -1.22
VPS33B-203ENST00000554264 SMARCC1Q92922 1105 aaPredicted RBP7.42□□□□□ -1.22
VPS33B-203ENST00000554264 NXPE3Q969Y0 559 aa7.42□□□□□ -1.22
VPS33B-203ENST00000554264 COG3Q96JB2 828 aa7.42□□□□□ -1.22
VPS33B-203ENST00000554264 CSRNP1Q96S65 589 aa7.42□□□□□ -1.22
VPS33B-203ENST00000554264 SLC12A5Q9H2X9 1139 aa7.42□□□□□ -1.22
VPS33B-203ENST00000554264 MAP3K19Q56UN5 1328 aa7.42□□□□□ -1.22
VPS33B-203ENST00000554264 A0A1W2PP64 1363 aa7.42□□□□□ -1.22
VPS33B-203ENST00000554264 RTL1A6NKG5 1358 aa7.42□□□□□ -1.22
VPS33B-203ENST00000554264 PALLDQ8WX93 1383 aa7.42□□□□□ -1.22
VPS33B-203ENST00000554264 A0A1W2PP55 124 aa7.41□□□□□ -1.22
VPS33B-203ENST00000554264 PDE2AO00408 941 aaPredicted RBP7.41□□□□□ -1.22
VPS33B-203ENST00000554264 PIK3R2O00459 728 aa7.41□□□□□ -1.22
VPS33B-203ENST00000554264 TM4SF5O14894 197 aa7.41□□□□□ -1.22
VPS33B-203ENST00000554264 SMNDC1O75940 238 aaKnown RBP eCLIP7.41□□□□□ -1.22
VPS33B-203ENST00000554264 TOMM70O94826 608 aa7.41□□□□□ -1.22
VPS33B-203ENST00000554264 EDN3P14138 238 aa7.41□□□□□ -1.22
VPS33B-203ENST00000554264 NFKBIBQ15653 356 aa7.41□□□□□ -1.22
VPS33B-203ENST00000554264 GRIK4Q16099 956 aa7.41□□□□□ -1.22
VPS33B-203ENST00000554264 TMEM102Q8N9M5 508 aaPredicted RBP7.41□□□□□ -1.22
VPS33B-203ENST00000554264 CCDC74AQ96AQ1 378 aa7.41□□□□□ -1.22
VPS33B-203ENST00000554264 SETDB2Q96T68 719 aa7.41□□□□□ -1.22
VPS33B-203ENST00000554264 NOP53Q9NZM5 478 aaKnown RBP7.41□□□□□ -1.22
VPS33B-203ENST00000554264 PCDH11XQ9BZA7 1347 aa7.41□□□□□ -1.22
VPS33B-203ENST00000554264 PCDH11YQ9BZA8 1340 aa7.41□□□□□ -1.22
VPS33B-203ENST00000554264 METTL12A8MUP2 240 aa7.4□□□□□ -1.22
VPS33B-203ENST00000554264 EPHA1P21709 976 aa7.4□□□□□ -1.22
VPS33B-203ENST00000554264 TRIM28Q13263 835 aaKnown RBP7.4□□□□□ -1.22
VPS33B-203ENST00000554264 NBPF6Q5VWK0 638 aa7.4□□□□□ -1.22
VPS33B-203ENST00000554264 TXNDC11Q6PKC3 985 aa7.4□□□□□ -1.22
VPS33B-203ENST00000554264 PI16Q6UXB8 463 aa7.4□□□□□ -1.22
VPS33B-203ENST00000554264 DNAJC14Q6Y2X3 702 aaPredicted RBP7.4□□□□□ -1.22
VPS33B-203ENST00000554264 FMR1NBQ8N0W7 255 aaPredicted RBP7.4□□□□□ -1.22
VPS33B-203ENST00000554264 FAM43AQ8N2R8 423 aa7.4□□□□□ -1.22
VPS33B-203ENST00000554264 EPS8L3Q8TE67 593 aaKnown RBP7.4□□□□□ -1.22
VPS33B-203ENST00000554264 NBPF4Q96M43 638 aa7.4□□□□□ -1.22
VPS33B-203ENST00000554264 TCF12Q99081 682 aa7.4□□□□□ -1.22
VPS33B-203ENST00000554264 ADAM19Q9H013 955 aa7.4□□□□□ -1.22
VPS33B-203ENST00000554264 DNAJC25Q9H1X3 360 aa7.4□□□□□ -1.22
VPS33B-203ENST00000554264 NPHS2Q9NP85 383 aa7.4□□□□□ -1.22
VPS33B-203ENST00000554264 WWC3Q9ULE0 1092 aa7.4□□□□□ -1.22
VPS33B-203ENST00000554264 ISY1Q9ULR0 285 aaKnown RBP7.4□□□□□ -1.22
VPS33B-203ENST00000554264 C5P01031 1676 aa7.4□□□□□ -1.23
VPS33B-203ENST00000554264 CICQ96RK0 1608 aaPredicted RBP7.39□□□□□ -1.23
VPS33B-203ENST00000554264 LINC01387J3KSC0 135 aa7.39□□□□□ -1.23
VPS33B-203ENST00000554264 CDC25BP30305 580 aa7.39□□□□□ -1.23
VPS33B-203ENST00000554264 CHRNA4P43681 627 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms