RNA–Protein interactions for RNA: ENST00000553831.5

PRKCH-207, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-207ENST00000553831 EMILIN3Q9NT22 766 aa17.03■□□□□ 0.32
PRKCH-207ENST00000553831 MYH8P13535 1937 aa17.03■□□□□ 0.32
PRKCH-207ENST00000553831 ROBO3Q96MS0 1386 aa17.02■□□□□ 0.32
PRKCH-207ENST00000553831 MINDY4BA8MYZ0 360 aa17.02■□□□□ 0.32
PRKCH-207ENST00000553831 APPP05067 770 aa17.02■□□□□ 0.32
PRKCH-207ENST00000553831 OSBPP22059 807 aa17.02■□□□□ 0.32
PRKCH-207ENST00000553831 PSMC4P43686 418 aa17.02■□□□□ 0.32
PRKCH-207ENST00000553831 TMEM179Q6ZVK1 233 aa17.02■□□□□ 0.32
PRKCH-207ENST00000553831 IFNL3Q8IZI9 196 aa17.02■□□□□ 0.32
PRKCH-207ENST00000553831 TRIM47Q96LD4 638 aa17.02■□□□□ 0.32
PRKCH-207ENST00000553831 C12orf42Q96LP6 360 aa17.02■□□□□ 0.32
PRKCH-207ENST00000553831 KIAA1683Q9H0B3 1180 aa17.02■□□□□ 0.32
PRKCH-207ENST00000553831 CENPFP49454 3210 aa17.02■□□□□ 0.31
PRKCH-207ENST00000553831 TRIM6-TRIM34B2RNG4 842 aa17.01■□□□□ 0.31
PRKCH-207ENST00000553831 PATL2C9JE40 543 aaKnown RBP17.01■□□□□ 0.31
PRKCH-207ENST00000553831 HOXA7P31268 230 aaPredicted RBP17.01■□□□□ 0.31
PRKCH-207ENST00000553831 USP14P54578 494 aa17.01■□□□□ 0.31
PRKCH-207ENST00000553831 IRX3P78415 501 aaPredicted RBP17.01■□□□□ 0.31
PRKCH-207ENST00000553831 CLEC10AQ8IUN9 316 aa17.01■□□□□ 0.31
PRKCH-207ENST00000553831 STK11IPQ8N1F8 1099 aa17.01■□□□□ 0.31
PRKCH-207ENST00000553831 PIAS4Q8N2W9 510 aaPredicted RBP17.01■□□□□ 0.31
PRKCH-207ENST00000553831 ANKRD13CQ8N6S4 541 aa17.01■□□□□ 0.31
PRKCH-207ENST00000553831 RILPL2Q969X0 211 aa17.01■□□□□ 0.31
PRKCH-207ENST00000553831 CCDC17Q96LX7 622 aa17.01■□□□□ 0.31
PRKCH-207ENST00000553831 PTCH2Q9Y6C5 1203 aa17.01■□□□□ 0.31
PRKCH-207ENST00000553831 A0A0D9SFI3 127 aa17■□□□□ 0.31
PRKCH-207ENST00000553831 A0A1W2PRG0 241 aa17■□□□□ 0.31
PRKCH-207ENST00000553831 FOXP2O15409 715 aa17■□□□□ 0.31
PRKCH-207ENST00000553831 FMNL1O95466 1100 aaPredicted RBP17■□□□□ 0.31
PRKCH-207ENST00000553831 PDE4AP27815 886 aa17■□□□□ 0.31
PRKCH-207ENST00000553831 FAM110CQ1W6H9 321 aa17■□□□□ 0.31
PRKCH-207ENST00000553831 FAM227BQ96M60 508 aa17■□□□□ 0.31
PRKCH-207ENST00000553831 NACAP1Q9BZK3 213 aa17■□□□□ 0.31
PRKCH-207ENST00000553831 HELLSQ9NRZ9 838 aa17■□□□□ 0.31
PRKCH-207ENST00000553831 GNRH1P01148 92 aa16.99■□□□□ 0.31
PRKCH-207ENST00000553831 VCAM1P19320 739 aa16.99■□□□□ 0.31
PRKCH-207ENST00000553831 GCLCP48506 637 aaPredicted RBP16.99■□□□□ 0.31
PRKCH-207ENST00000553831 FCGRTP55899 365 aa16.99■□□□□ 0.31
PRKCH-207ENST00000553831 SOX10P56693 466 aa16.99■□□□□ 0.31
PRKCH-207ENST00000553831 ICA1Q05084 483 aa16.99■□□□□ 0.31
PRKCH-207ENST00000553831 P2RX7Q99572 595 aaKnown RBP16.99■□□□□ 0.31
PRKCH-207ENST00000553831 NAPBQ9H115 298 aa16.99■□□□□ 0.31
PRKCH-207ENST00000553831 RASA1P20936 1047 aa16.98■□□□□ 0.31
PRKCH-207ENST00000553831 HERVK_113P62684 666 aa16.98■□□□□ 0.31
PRKCH-207ENST00000553831 NMIQ13287 307 aaPredicted RBP16.98■□□□□ 0.31
PRKCH-207ENST00000553831 VPS53Q5VIR6 699 aa16.98■□□□□ 0.31
PRKCH-207ENST00000553831 TICAM2Q86XR7 235 aa16.98■□□□□ 0.31
PRKCH-207ENST00000553831 SRRDQ9UH36 339 aa16.98■□□□□ 0.31
PRKCH-207ENST00000553831 MYPNQ86TC9 1320 aa16.97■□□□□ 0.31
PRKCH-207ENST00000553831 USP17L15C9J2P7 530 aa16.97■□□□□ 0.31
PRKCH-207ENST00000553831 USP17L13C9JLJ4 530 aa16.97■□□□□ 0.31
PRKCH-207ENST00000553831 USP17L11C9JVI0 530 aa16.97■□□□□ 0.31
PRKCH-207ENST00000553831 USP17L18D6R9N7 530 aa16.97■□□□□ 0.31
PRKCH-207ENST00000553831 USP17L22D6RA61 530 aa16.97■□□□□ 0.31
PRKCH-207ENST00000553831 USP17L17D6RBQ6 530 aa16.97■□□□□ 0.31
PRKCH-207ENST00000553831 USP17L19D6RCP7 530 aa16.97■□□□□ 0.31
PRKCH-207ENST00000553831 USP17L20D6RJB6 530 aa16.97■□□□□ 0.31
PRKCH-207ENST00000553831 PRMT2P55345 433 aa16.97■□□□□ 0.31
PRKCH-207ENST00000553831 USP17L24Q0WX57 530 aa16.97■□□□□ 0.31
PRKCH-207ENST00000553831 MCMDC2Q4G0Z9 681 aa16.97■□□□□ 0.31
PRKCH-207ENST00000553831 ZNF589Q86UQ0 364 aaPredicted RBP16.97■□□□□ 0.31
PRKCH-207ENST00000553831 SIAH1Q8IUQ4 282 aa16.97■□□□□ 0.31
PRKCH-207ENST00000553831 ARMC5Q96C12 935 aa16.97■□□□□ 0.31
PRKCH-207ENST00000553831 MKNK2Q9HBH9 465 aa16.97■□□□□ 0.31
PRKCH-207ENST00000553831 ARHGEF10LQ9HCE6 1279 aa16.97■□□□□ 0.31
PRKCH-207ENST00000553831 MORF4L1Q9UBU8 362 aa16.97■□□□□ 0.31
PRKCH-207ENST00000553831 MGAMO43451 1857 aa16.97■□□□□ 0.31
PRKCH-207ENST00000553831 BRCA2P51587 3418 aa16.96■□□□□ 0.31
PRKCH-207ENST00000553831 GREB1LQ9C091 1923 aaPredicted RBP16.96■□□□□ 0.31
PRKCH-207ENST00000553831 PEX10O60683 326 aa16.96■□□□□ 0.31
PRKCH-207ENST00000553831 PRDM1O75626 825 aa16.96■□□□□ 0.31
PRKCH-207ENST00000553831 SDSP20132 328 aa16.96■□□□□ 0.31
PRKCH-207ENST00000553831 HOXD10P28358 340 aa16.96■□□□□ 0.31
PRKCH-207ENST00000553831 PRKCZQ05513 592 aa16.96■□□□□ 0.31
PRKCH-207ENST00000553831 PPARAQ07869 468 aa16.96■□□□□ 0.31
PRKCH-207ENST00000553831 SLC9C1Q4G0N8 1177 aa16.96■□□□□ 0.31
PRKCH-207ENST00000553831 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.96■□□□□ 0.31
PRKCH-207ENST00000553831 RPAP3Q9H6T3 665 aaPredicted RBP16.96■□□□□ 0.31
PRKCH-207ENST00000553831 TXNRD2Q9NNW7 524 aa16.96■□□□□ 0.31
PRKCH-207ENST00000553831 TNPO2O14787 897 aaKnown RBP16.95■□□□□ 0.3
PRKCH-207ENST00000553831 EEF2P13639 858 aaKnown RBP16.95■□□□□ 0.3
PRKCH-207ENST00000553831 ATP2B2Q01814 1243 aa16.95■□□□□ 0.3
PRKCH-207ENST00000553831 KIAA1755Q5JYT7 1200 aa16.95■□□□□ 0.3
PRKCH-207ENST00000553831 CATSPERGQ6ZRH7 1159 aa16.95■□□□□ 0.3
PRKCH-207ENST00000553831 PAGR1Q9BTK6 254 aa16.95■□□□□ 0.3
PRKCH-207ENST00000553831 SH2D4AQ9H788 454 aa16.95■□□□□ 0.3
PRKCH-207ENST00000553831 KANSL2Q9H9L4 492 aa16.95■□□□□ 0.3
PRKCH-207ENST00000553831 GABRQQ9UN88 632 aa16.95■□□□□ 0.3
PRKCH-207ENST00000553831 TMX2Q9Y320 296 aa16.95■□□□□ 0.3
PRKCH-207ENST00000553831 CCDC171Q6TFL3 1326 aa16.95■□□□□ 0.3
PRKCH-207ENST00000553831 GSPT1P15170 499 aaKnown RBP16.94■□□□□ 0.3
PRKCH-207ENST00000553831 POTEEQ6S8J3 1075 aa16.94■□□□□ 0.3
PRKCH-207ENST00000553831 RAET1EQ8TD07 263 aa16.94■□□□□ 0.3
PRKCH-207ENST00000553831 SH3TC2Q8TF17 1288 aa16.94■□□□□ 0.3
PRKCH-207ENST00000553831 GTF3C2Q8WUA4 911 aaPredicted RBP16.94■□□□□ 0.3
PRKCH-207ENST00000553831 ZNF333Q96JL9 665 aa16.94■□□□□ 0.3
PRKCH-207ENST00000553831 VCPKMTQ9H867 229 aa16.94■□□□□ 0.3
PRKCH-207ENST00000553831 ZNF287Q9HBT7 754 aa16.94■□□□□ 0.3
PRKCH-207ENST00000553831 RBPJLQ9UBG7 517 aa16.94■□□□□ 0.3
PRKCH-207ENST00000553831 SLC3A2P08195 630 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms