RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 FAM161BQ96MY7 647 aa5.68□□□□□ -1.5
LINC00648-201ENST00000553747 PARD6AQ9NPB6 346 aa5.68□□□□□ -1.5
LINC00648-201ENST00000553747 DNAJC25-GNG10A0A024R161 153 aa5.67□□□□□ -1.5
LINC00648-201ENST00000553747 A0A0G2JLL6 359 aaPredicted RBP5.67□□□□□ -1.5
LINC00648-201ENST00000553747 PRAMEF27A3QJZ7 478 aa5.67□□□□□ -1.5
LINC00648-201ENST00000553747 SORBS3O60504 671 aa5.67□□□□□ -1.5
LINC00648-201ENST00000553747 SLITRK5O94991 958 aa5.67□□□□□ -1.5
LINC00648-201ENST00000553747 GLDCP23378 1020 aa5.67□□□□□ -1.5
LINC00648-201ENST00000553747 ST13P50502 369 aaKnown RBP5.67□□□□□ -1.5
LINC00648-201ENST00000553747 HK2P52789 917 aa5.67□□□□□ -1.5
LINC00648-201ENST00000553747 RING1Q06587 406 aa5.67□□□□□ -1.5
LINC00648-201ENST00000553747 RALGPS1Q5JS13 557 aa5.67□□□□□ -1.5
LINC00648-201ENST00000553747 ZBTB37Q5TC79 503 aa5.67□□□□□ -1.5
LINC00648-201ENST00000553747 DIEXFQ68CQ4 756 aaKnown RBP5.67□□□□□ -1.5
LINC00648-201ENST00000553747 ARMCX6Q7L4S7 300 aa5.67□□□□□ -1.5
LINC00648-201ENST00000553747 ZNF507Q8TCN5 953 aa5.67□□□□□ -1.5
LINC00648-201ENST00000553747 ALPK1Q96QP1 1244 aa5.67□□□□□ -1.5
LINC00648-201ENST00000553747 ZCCHC4Q9H5U6 513 aa5.67□□□□□ -1.5
LINC00648-201ENST00000553747 TPX2Q9ULW0 747 aaKnown RBP5.67□□□□□ -1.5
LINC00648-201ENST00000553747 MAPK8IP1Q9UQF2 711 aa5.67□□□□□ -1.5
LINC00648-201ENST00000553747 FOXD2O60548 495 aaPredicted RBP5.66□□□□□ -1.5
LINC00648-201ENST00000553747 TRHRP34981 398 aaPredicted RBP5.66□□□□□ -1.5
LINC00648-201ENST00000553747 LIG3P49916 1009 aa5.66□□□□□ -1.5
LINC00648-201ENST00000553747 PTPN11Q06124 597 aaPredicted RBP5.66□□□□□ -1.5
LINC00648-201ENST00000553747 INPP5AQ14642 412 aa5.66□□□□□ -1.5
LINC00648-201ENST00000553747 WIPI1Q5MNZ9 446 aaPredicted RBP5.66□□□□□ -1.5
LINC00648-201ENST00000553747 TMCO4Q5TGY1 634 aa5.66□□□□□ -1.5
LINC00648-201ENST00000553747 LRFN4Q6PJG9 635 aa5.66□□□□□ -1.5
LINC00648-201ENST00000553747 MFSD4AQ8N468 514 aa5.66□□□□□ -1.5
LINC00648-201ENST00000553747 UBE2FQ969M7 185 aa5.66□□□□□ -1.5
LINC00648-201ENST00000553747 PLPPR2Q96GM1 343 aa5.66□□□□□ -1.5
LINC00648-201ENST00000553747 NOC4LQ9BVI4 516 aaKnown RBP5.66□□□□□ -1.5
LINC00648-201ENST00000553747 MIR1-1HGQ9H1L0 117 aa5.66□□□□□ -1.5
LINC00648-201ENST00000553747 ZSWIM5Q9P217 1185 aa5.66□□□□□ -1.5
LINC00648-201ENST00000553747 VTI1BQ9UEU0 232 aa5.66□□□□□ -1.5
LINC00648-201ENST00000553747 SNCAIPQ9Y6H5 919 aa5.66□□□□□ -1.5
LINC00648-201ENST00000553747 CBX7O95931 251 aa5.65□□□□□ -1.5
LINC00648-201ENST00000553747 RAC2P15153 192 aa5.65□□□□□ -1.5
LINC00648-201ENST00000553747 ETF1P62495 437 aaKnown RBP5.65□□□□□ -1.5
LINC00648-201ENST00000553747 TAGLNQ01995 201 aaKnown RBP5.65□□□□□ -1.5
LINC00648-201ENST00000553747 SFRP5Q5T4F7 317 aa5.65□□□□□ -1.5
LINC00648-201ENST00000553747 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.65□□□□□ -1.5
LINC00648-201ENST00000553747 AGMOQ6ZNB7 445 aa5.65□□□□□ -1.5
LINC00648-201ENST00000553747 RIN3Q8TB24 985 aa5.65□□□□□ -1.5
LINC00648-201ENST00000553747 GAL3ST3Q96A11 431 aa5.65□□□□□ -1.5
LINC00648-201ENST00000553747 CRELD1Q96HD1 420 aa5.65□□□□□ -1.5
LINC00648-201ENST00000553747 MIPEPQ99797 713 aa5.65□□□□□ -1.5
LINC00648-201ENST00000553747 PCDHB5Q9Y5E4 795 aa5.65□□□□□ -1.5
LINC00648-201ENST00000553747 ST14Q9Y5Y6 855 aa5.65□□□□□ -1.5
LINC00648-201ENST00000553747 CAPN6Q9Y6Q1 641 aa5.65□□□□□ -1.5
LINC00648-201ENST00000553747 CTSHP09668 335 aa5.64□□□□□ -1.51
LINC00648-201ENST00000553747 SEPT6Q14141 434 aa5.64□□□□□ -1.51
LINC00648-201ENST00000553747 ZNF326Q5BKZ1 582 aaKnown RBP5.64□□□□□ -1.51
LINC00648-201ENST00000553747 MYLIPQ8WY64 445 aa5.64□□□□□ -1.51
LINC00648-201ENST00000553747 SLC26A8Q96RN1 970 aa5.64□□□□□ -1.51
LINC00648-201ENST00000553747 BCL2L13Q9BXK5 485 aa5.64□□□□□ -1.51
LINC00648-201ENST00000553747 WNT10AQ9GZT5 417 aa5.64□□□□□ -1.51
LINC00648-201ENST00000553747 USP31Q70CQ4 1352 aa5.64□□□□□ -1.51
LINC00648-201ENST00000553747 WASH4PA8MWX3 477 aa5.63□□□□□ -1.51
LINC00648-201ENST00000553747 LRIG2O94898 1065 aa5.63□□□□□ -1.51
LINC00648-201ENST00000553747 HID1Q8IV36 788 aa5.63□□□□□ -1.51
LINC00648-201ENST00000553747 JARID2Q92833 1246 aaPredicted RBP5.63□□□□□ -1.51
LINC00648-201ENST00000553747 RNF32Q9H0A6 362 aa5.63□□□□□ -1.51
LINC00648-201ENST00000553747 FBRSQ9HAH7 460 aa5.63□□□□□ -1.51
LINC00648-201ENST00000553747 TLR6Q9Y2C9 796 aa5.63□□□□□ -1.51
LINC00648-201ENST00000553747 CCDC9Q9Y3X0 531 aaKnown RBP5.63□□□□□ -1.51
LINC00648-201ENST00000553747 TFE3P19532 575 aaPredicted RBP5.62□□□□□ -1.51
LINC00648-201ENST00000553747 CDK8P49336 464 aa5.62□□□□□ -1.51
LINC00648-201ENST00000553747 TSNAXIP1Q2TAA8 658 aa5.62□□□□□ -1.51
LINC00648-201ENST00000553747 RELL1Q8IUW5 271 aa5.62□□□□□ -1.51
LINC00648-201ENST00000553747 GIPC2Q8TF65 315 aa5.62□□□□□ -1.51
LINC00648-201ENST00000553747 CCDC120Q96HB5 630 aa5.62□□□□□ -1.51
LINC00648-201ENST00000553747 MCOLN1Q9GZU1 580 aa5.62□□□□□ -1.51
LINC00648-201ENST00000553747 ADAMTS10Q9H324 1103 aa5.62□□□□□ -1.51
LINC00648-201ENST00000553747 GRK4P32298 578 aa5.61□□□□□ -1.51
LINC00648-201ENST00000553747 MFAP1P55081 439 aaKnown RBP5.61□□□□□ -1.51
LINC00648-201ENST00000553747 KRTAP10-2P60368 255 aa5.61□□□□□ -1.51
LINC00648-201ENST00000553747 PDE4BQ07343 736 aa5.61□□□□□ -1.51
LINC00648-201ENST00000553747 NKG7Q16617 165 aa5.61□□□□□ -1.51
LINC00648-201ENST00000553747 MFSD2AQ8NA29 543 aa5.61□□□□□ -1.51
LINC00648-201ENST00000553747 PHC3Q8NDX5 983 aa5.61□□□□□ -1.51
LINC00648-201ENST00000553747 XAGE3Q8WTP9 111 aa5.61□□□□□ -1.51
LINC00648-201ENST00000553747 C19orf44Q9H6X5 657 aa5.61□□□□□ -1.51
LINC00648-201ENST00000553747 TMEM59LQ9UK28 342 aa5.61□□□□□ -1.51
LINC00648-201ENST00000553747 TACC3Q9Y6A5 838 aa5.61□□□□□ -1.51
LINC00648-201ENST00000553747 F6X3S4 739 aa5.6□□□□□ -1.51
LINC00648-201ENST00000553747 GFRA2O00451 464 aa5.6□□□□□ -1.51
LINC00648-201ENST00000553747 BPNT1O95861 308 aa5.6□□□□□ -1.51
LINC00648-201ENST00000553747 HPXP02790 462 aa5.6□□□□□ -1.51
LINC00648-201ENST00000553747 ESR1P03372 595 aa5.6□□□□□ -1.51
LINC00648-201ENST00000553747 PGRP06401 933 aa5.6□□□□□ -1.51
LINC00648-201ENST00000553747 SYN1P17600 705 aa5.6□□□□□ -1.51
LINC00648-201ENST00000553747 DLG4P78352 724 aa5.6□□□□□ -1.51
LINC00648-201ENST00000553747 RPL6Q02878 288 aaKnown RBP5.6□□□□□ -1.51
LINC00648-201ENST00000553747 PWP1Q13610 501 aa5.6□□□□□ -1.51
LINC00648-201ENST00000553747 SLBPQ14493 270 aaKnown RBP eCLIP5.6□□□□□ -1.51
LINC00648-201ENST00000553747 C22orf34Q6ZV56 151 aa5.6□□□□□ -1.51
LINC00648-201ENST00000553747 ZNF605Q86T29 641 aa5.6□□□□□ -1.51
LINC00648-201ENST00000553747 GGNQ86UU5 652 aa5.6□□□□□ -1.51
LINC00648-201ENST00000553747 KCNC2Q96PR1 638 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms