RNA–Protein interactions for RNA: ENST00000553678.1

AL049775.3-201, humanhuman

TSL 3 BASIC

Gene AL049775.3, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049775.3-201ENST00000553678 VCAM1P19320 739 aa13.18□□□□□ -0.3
AL049775.3-201ENST00000553678 GRK4P32298 578 aa13.18□□□□□ -0.3
AL049775.3-201ENST00000553678 CDK8P49336 464 aa13.18□□□□□ -0.3
AL049775.3-201ENST00000553678 ANKRD45Q5TZF3 282 aa13.18□□□□□ -0.3
AL049775.3-201ENST00000553678 TMED8Q6PL24 325 aaPredicted RBP13.18□□□□□ -0.3
AL049775.3-201ENST00000553678 C12orf42Q96LP6 360 aa13.18□□□□□ -0.3
AL049775.3-201ENST00000553678 TBC1D2Q9BYX2 928 aa13.18□□□□□ -0.3
AL049775.3-201ENST00000553678 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.18□□□□□ -0.3
AL049775.3-201ENST00000553678 UNC93B1Q9H1C4 597 aa13.18□□□□□ -0.3
AL049775.3-201ENST00000553678 MORF4L1Q9UBU8 362 aa13.18□□□□□ -0.3
AL049775.3-201ENST00000553678 GJD2Q9UKL4 321 aa13.18□□□□□ -0.3
AL049775.3-201ENST00000553678 TACC3Q9Y6A5 838 aa13.18□□□□□ -0.3
AL049775.3-201ENST00000553678 PARP14Q460N5 1801 aa13.18□□□□□ -0.3
AL049775.3-201ENST00000553678 C19orf81C9J6K1 198 aa13.17□□□□□ -0.3
AL049775.3-201ENST00000553678 MPHOSPH10O00566 681 aaKnown RBP13.17□□□□□ -0.3
AL049775.3-201ENST00000553678 TNPO2O14787 897 aaKnown RBP13.17□□□□□ -0.3
AL049775.3-201ENST00000553678 RNF113AO15541 343 aaKnown RBP13.17□□□□□ -0.3
AL049775.3-201ENST00000553678 USP17L2Q6R6M4 530 aa13.17□□□□□ -0.3
AL049775.3-201ENST00000553678 CCDC129Q6ZRS4 1044 aa13.17□□□□□ -0.3
AL049775.3-201ENST00000553678 CERS3Q8IU89 383 aa13.17□□□□□ -0.3
AL049775.3-201ENST00000553678 RAET1EQ8TD07 263 aa13.17□□□□□ -0.3
AL049775.3-201ENST00000553678 KIAA1683Q9H0B3 1180 aa13.17□□□□□ -0.3
AL049775.3-201ENST00000553678 TMOD4Q9NZQ9 345 aa13.17□□□□□ -0.3
AL049775.3-201ENST00000553678 BTBD7Q9P203 1132 aa13.17□□□□□ -0.3
AL049775.3-201ENST00000553678 GPAA1O43292 621 aa13.16□□□□□ -0.3
AL049775.3-201ENST00000553678 ADCY3O60266 1144 aa13.16□□□□□ -0.3
AL049775.3-201ENST00000553678 GNRH1P01148 92 aa13.16□□□□□ -0.3
AL049775.3-201ENST00000553678 CCL5P13501 91 aa13.16□□□□□ -0.3
AL049775.3-201ENST00000553678 MX1P20591 662 aa13.16□□□□□ -0.3
AL049775.3-201ENST00000553678 IRX6P78412 446 aaPredicted RBP13.16□□□□□ -0.3
AL049775.3-201ENST00000553678 IRX3P78415 501 aaPredicted RBP13.16□□□□□ -0.3
AL049775.3-201ENST00000553678 HDAC1Q13547 482 aaPredicted RBP13.16□□□□□ -0.3
AL049775.3-201ENST00000553678 C16orf86Q6ZW13 317 aa13.16□□□□□ -0.3
AL049775.3-201ENST00000553678 APPBP2Q92624 585 aa13.16□□□□□ -0.3
AL049775.3-201ENST00000553678 FEZ1Q99689 392 aa13.16□□□□□ -0.3
AL049775.3-201ENST00000553678 PAGR1Q9BTK6 254 aa13.16□□□□□ -0.3
AL049775.3-201ENST00000553678 RPAP3Q9H6T3 665 aaPredicted RBP13.16□□□□□ -0.3
AL049775.3-201ENST00000553678 ATP8A2Q9NTI2 1148 aa13.16□□□□□ -0.3
AL049775.3-201ENST00000553678 GINM1Q9NU53 330 aa13.16□□□□□ -0.3
AL049775.3-201ENST00000553678 PNMA3Q9UL41 463 aa13.16□□□□□ -0.3
AL049775.3-201ENST00000553678 TAOK2Q9UL54 1235 aa13.16□□□□□ -0.3
AL049775.3-201ENST00000553678 INHAP05111 366 aa13.15□□□□□ -0.3
AL049775.3-201ENST00000553678 GCLCP48506 637 aaPredicted RBP13.15□□□□□ -0.3
AL049775.3-201ENST00000553678 PRMT2P55345 433 aa13.15□□□□□ -0.3
AL049775.3-201ENST00000553678 ARHGEF6Q15052 776 aa13.15□□□□□ -0.3
AL049775.3-201ENST00000553678 CATSPERGQ6ZRH7 1159 aa13.15□□□□□ -0.3
AL049775.3-201ENST00000553678 INCENPQ9NQS7 918 aa13.15□□□□□ -0.3
AL049775.3-201ENST00000553678 PCDH10Q9P2E7 1040 aa13.15□□□□□ -0.3
AL049775.3-201ENST00000553678 SUPT16HQ9Y5B9 1047 aaKnown RBP13.15□□□□□ -0.3
AL049775.3-201ENST00000553678 A0A0G2JMZ2 1700 aa13.15□□□□□ -0.3
AL049775.3-201ENST00000553678 TTC41PQ6P2S7 1318 aa13.14□□□□□ -0.31
AL049775.3-201ENST00000553678 SPDYE16A6NNV3 312 aaPredicted RBP13.14□□□□□ -0.31
AL049775.3-201ENST00000553678 RASA1P20936 1047 aa13.14□□□□□ -0.31
AL049775.3-201ENST00000553678 ERVK-9P63128 1117 aa13.14□□□□□ -0.31
AL049775.3-201ENST00000553678 ERVK-24P63145 666 aa13.14□□□□□ -0.31
AL049775.3-201ENST00000553678 CCL14Q16627 93 aa13.14□□□□□ -0.31
AL049775.3-201ENST00000553678 ZMYM1Q5SVZ6 1142 aa13.14□□□□□ -0.31
AL049775.3-201ENST00000553678 B4GALNT3Q6L9W6 998 aa13.14□□□□□ -0.31
AL049775.3-201ENST00000553678 SPICE1Q8N0Z3 855 aa13.14□□□□□ -0.31
AL049775.3-201ENST00000553678 NKX2-3Q8TAU0 364 aa13.14□□□□□ -0.31
AL049775.3-201ENST00000553678 TRIB2Q92519 343 aa13.14□□□□□ -0.31
AL049775.3-201ENST00000553678 LNPKQ9C0E8 428 aa13.14□□□□□ -0.31
AL049775.3-201ENST00000553678 CABP5Q9NP86 173 aa13.14□□□□□ -0.31
AL049775.3-201ENST00000553678 COL11A1P12107 1806 aaPredicted RBP13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 USP17L15C9J2P7 530 aa13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 USP17L13C9JLJ4 530 aa13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 USP17L11C9JVI0 530 aa13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 USP17L18D6R9N7 530 aa13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 USP17L22D6RA61 530 aa13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 USP17L17D6RBQ6 530 aa13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 USP17L19D6RCP7 530 aa13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 USP17L20D6RJB6 530 aa13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 PRDM1O75626 825 aa13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 EEF2P13639 858 aaKnown RBP13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 HOXD10P28358 340 aa13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 PDE1AP54750 535 aa13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 USP17L24Q0WX57 530 aa13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 PABPC4Q13310 644 aaKnown RBP eCLIP13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 IRF5Q13568 498 aa13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 VPS53Q5VIR6 699 aa13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 TMEM179Q6ZVK1 233 aa13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 UBE2Q1Q7Z7E8 422 aa13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 NBPF11Q86T75 865 aa13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 SMC5Q8IY18 1101 aa13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 USP6NLQ92738 828 aa13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 TMEM106CQ9BVX2 250 aa13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 FBXO28Q9NVF7 368 aa13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 STAP2Q9UGK3 403 aa13.13□□□□□ -0.31
AL049775.3-201ENST00000553678 ALPK3Q96L96 1907 aa13.12□□□□□ -0.31
AL049775.3-201ENST00000553678 ROBO3Q96MS0 1386 aa13.12□□□□□ -0.31
AL049775.3-201ENST00000553678 MINDY4BA8MYZ0 360 aa13.12□□□□□ -0.31
AL049775.3-201ENST00000553678 GLRX3O76003 335 aaKnown RBP13.12□□□□□ -0.31
AL049775.3-201ENST00000553678 CYP2B6P20813 491 aa13.12□□□□□ -0.31
AL049775.3-201ENST00000553678 SBK1Q52WX2 424 aa13.12□□□□□ -0.31
AL049775.3-201ENST00000553678 ZSCAN25Q6NSZ9 544 aa13.12□□□□□ -0.31
AL049775.3-201ENST00000553678 SLAIN1Q8ND83 568 aa13.12□□□□□ -0.31
AL049775.3-201ENST00000553678 GPRC5AQ8NFJ5 357 aa13.12□□□□□ -0.31
AL049775.3-201ENST00000553678 GPATCH3Q96I76 525 aa13.12□□□□□ -0.31
AL049775.3-201ENST00000553678 FAM227BQ96M60 508 aa13.12□□□□□ -0.31
AL049775.3-201ENST00000553678 NUP88Q99567 741 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms