RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 ZSCAN10Q96SZ4 725 aaPredicted RBP22.77■■□□□ 1.24
PSEN1-207ENST00000553599 WDR18Q9BV38 432 aa22.77■■□□□ 1.24
PSEN1-207ENST00000553599 MTMR4Q9NYA4 1195 aa22.77■■□□□ 1.24
PSEN1-207ENST00000553599 NYAP2Q9P242 653 aa22.77■■□□□ 1.24
PSEN1-207ENST00000553599 SYNPO2Q9UMS6 1093 aa22.77■■□□□ 1.24
PSEN1-207ENST00000553599 CYP46A1Q9Y6A2 500 aa22.77■■□□□ 1.24
PSEN1-207ENST00000553599 ERICH2A1L162 156 aa22.76■■□□□ 1.23
PSEN1-207ENST00000553599 TTLL1O95922 423 aa22.76■■□□□ 1.23
PSEN1-207ENST00000553599 CASTP20810 708 aaKnown RBP22.76■■□□□ 1.23
PSEN1-207ENST00000553599 ICA1Q05084 483 aa22.76■■□□□ 1.23
PSEN1-207ENST00000553599 RUFY3Q7L099 469 aa22.76■■□□□ 1.23
PSEN1-207ENST00000553599 CYB5R4Q7L1T6 521 aa22.76■■□□□ 1.23
PSEN1-207ENST00000553599 CLMNQ96JQ2 1002 aa22.76■■□□□ 1.23
PSEN1-207ENST00000553599 SH2D4AQ9H788 454 aa22.76■■□□□ 1.23
PSEN1-207ENST00000553599 ELP3Q9H9T3 547 aa22.76■■□□□ 1.23
PSEN1-207ENST00000553599 IL17RBQ9NRM6 502 aa22.76■■□□□ 1.23
PSEN1-207ENST00000553599 ABT1Q9ULW3 272 aaKnown RBP22.76■■□□□ 1.23
PSEN1-207ENST00000553599 PRC1O43663 620 aa22.75■■□□□ 1.23
PSEN1-207ENST00000553599 RPS6KB1P23443 525 aa22.75■■□□□ 1.23
PSEN1-207ENST00000553599 EXOSC10Q01780 885 aaKnown RBP22.75■■□□□ 1.23
PSEN1-207ENST00000553599 ANKS1AQ92625 1134 aa22.75■■□□□ 1.23
PSEN1-207ENST00000553599 CEP95Q96GE4 821 aa22.75■■□□□ 1.23
PSEN1-207ENST00000553599 ARHGEF10LQ9HCE6 1279 aa22.75■■□□□ 1.23
PSEN1-207ENST00000553599 ANTXR2P58335 489 aa22.74■■□□□ 1.23
PSEN1-207ENST00000553599 PPIL2Q13356 520 aa22.74■■□□□ 1.23
PSEN1-207ENST00000553599 SHROOM1Q2M3G4 852 aaPredicted RBP22.74■■□□□ 1.23
PSEN1-207ENST00000553599 RGMBQ6NW40 437 aa22.74■■□□□ 1.23
PSEN1-207ENST00000553599 TMTC2Q8N394 836 aa22.74■■□□□ 1.23
PSEN1-207ENST00000553599 FBXL16Q8N461 479 aa22.74■■□□□ 1.23
PSEN1-207ENST00000553599 MKL1Q969V6 931 aa22.74■■□□□ 1.23
PSEN1-207ENST00000553599 ZHX2Q9Y6X8 837 aa22.74■■□□□ 1.23
PSEN1-207ENST00000553599 TNKSO95271 1327 aa22.74■■□□□ 1.23
PSEN1-207ENST00000553599 IFIT3O14879 490 aaKnown RBP22.73■■□□□ 1.23
PSEN1-207ENST00000553599 ZBTB48P10074 688 aaPredicted RBP22.73■■□□□ 1.23
PSEN1-207ENST00000553599 ZNF280CQ8ND82 737 aa22.73■■□□□ 1.23
PSEN1-207ENST00000553599 NKX2-3Q8TAU0 364 aa22.73■■□□□ 1.23
PSEN1-207ENST00000553599 CCDC102AQ96A19 550 aa22.73■■□□□ 1.23
PSEN1-207ENST00000553599 OPTNQ96CV9 577 aa22.73■■□□□ 1.23
PSEN1-207ENST00000553599 CXCL11O14625 94 aa22.72■■□□□ 1.23
PSEN1-207ENST00000553599 EEF2P13639 858 aaKnown RBP22.72■■□□□ 1.23
PSEN1-207ENST00000553599 LIFRP42702 1097 aa22.72■■□□□ 1.23
PSEN1-207ENST00000553599 ZNF157P51786 506 aaPredicted RBP22.72■■□□□ 1.23
PSEN1-207ENST00000553599 SEC23AQ15436 765 aa22.72■■□□□ 1.23
PSEN1-207ENST00000553599 ENAHQ8N8S7 591 aaPredicted RBP22.72■■□□□ 1.23
PSEN1-207ENST00000553599 IGDCC4Q8TDY8 1250 aa22.72■■□□□ 1.23
PSEN1-207ENST00000553599 WNK4Q96J92 1243 aa22.72■■□□□ 1.23
PSEN1-207ENST00000553599 KIF2CQ99661 725 aa22.72■■□□□ 1.23
PSEN1-207ENST00000553599 ALDH8A1Q9H2A2 487 aaPredicted RBP22.72■■□□□ 1.23
PSEN1-207ENST00000553599 STX8Q9UNK0 236 aa22.72■■□□□ 1.23
PSEN1-207ENST00000553599 AFG3L2Q9Y4W6 797 aa22.72■■□□□ 1.23
PSEN1-207ENST00000553599 PHIPQ8WWQ0 1821 aa22.71■■□□□ 1.23
PSEN1-207ENST00000553599 RASSF10A6NK89 507 aa22.71■■□□□ 1.23
PSEN1-207ENST00000553599 C19orf81C9J6K1 198 aa22.71■■□□□ 1.23
PSEN1-207ENST00000553599 NMT2O60551 498 aa22.71■■□□□ 1.23
PSEN1-207ENST00000553599 TOP1P11387 765 aaKnown RBP22.71■■□□□ 1.23
PSEN1-207ENST00000553599 USP14P54578 494 aa22.71■■□□□ 1.23
PSEN1-207ENST00000553599 C1QTNF8P60827 252 aa22.71■■□□□ 1.23
PSEN1-207ENST00000553599 WTAPQ15007 396 aa22.71■■□□□ 1.23
PSEN1-207ENST00000553599 RABEP1Q15276 862 aa22.71■■□□□ 1.23
PSEN1-207ENST00000553599 TMEM67Q5HYA8 995 aa22.71■■□□□ 1.23
PSEN1-207ENST00000553599 RCSD1Q6JBY9 416 aa22.71■■□□□ 1.23
PSEN1-207ENST00000553599 SIAH1Q8IUQ4 282 aa22.71■■□□□ 1.23
PSEN1-207ENST00000553599 OTUD5Q96G74 571 aa22.71■■□□□ 1.23
PSEN1-207ENST00000553599 ZKSCAN3Q9BRR0 538 aa22.71■■□□□ 1.23
PSEN1-207ENST00000553599 KIAA1683Q9H0B3 1180 aa22.71■■□□□ 1.23
PSEN1-207ENST00000553599 CLIP2Q9UDT6 1046 aa22.71■■□□□ 1.23
PSEN1-207ENST00000553599 KCNH4Q9UQ05 1017 aa22.71■■□□□ 1.23
PSEN1-207ENST00000553599 TMX2Q9Y320 296 aa22.71■■□□□ 1.23
PSEN1-207ENST00000553599 USP17L10C9JJH3 530 aa22.7■■□□□ 1.22
PSEN1-207ENST00000553599 BACE1P56817 501 aa22.7■■□□□ 1.22
PSEN1-207ENST00000553599 FGD1P98174 961 aa22.7■■□□□ 1.22
PSEN1-207ENST00000553599 IFIT1BQ5T764 474 aaKnown RBP22.7■■□□□ 1.22
PSEN1-207ENST00000553599 CHST3Q7LGC8 479 aa22.7■■□□□ 1.22
PSEN1-207ENST00000553599 UPF3BQ9BZI7 483 aaKnown RBP22.7■■□□□ 1.22
PSEN1-207ENST00000553599 SH2B2O14492 632 aaPredicted RBP22.69■■□□□ 1.22
PSEN1-207ENST00000553599 SLC10A3P09131 477 aa22.69■■□□□ 1.22
PSEN1-207ENST00000553599 ATP2B2Q01814 1243 aa22.69■■□□□ 1.22
PSEN1-207ENST00000553599 SPP2Q13103 211 aa22.69■■□□□ 1.22
PSEN1-207ENST00000553599 SPRYD7Q5W111 196 aa22.69■■□□□ 1.22
PSEN1-207ENST00000553599 SGMS1Q86VZ5 419 aa22.69■■□□□ 1.22
PSEN1-207ENST00000553599 RASAL3Q86YV0 1011 aa22.69■■□□□ 1.22
PSEN1-207ENST00000553599 AGXT2Q9BYV1 514 aa22.69■■□□□ 1.22
PSEN1-207ENST00000553599 PDRG1Q9NUG6 133 aa22.69■■□□□ 1.22
PSEN1-207ENST00000553599 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.69■■□□□ 1.22
PSEN1-207ENST00000553599 IRF6O14896 467 aa22.68■■□□□ 1.22
PSEN1-207ENST00000553599 CPA1P15085 419 aa22.68■■□□□ 1.22
PSEN1-207ENST00000553599 NEK4P51957 841 aa22.68■■□□□ 1.22
PSEN1-207ENST00000553599 GTF2A2P52657 109 aa22.68■■□□□ 1.22
PSEN1-207ENST00000553599 ANKRD1Q15327 319 aa22.68■■□□□ 1.22
PSEN1-207ENST00000553599 DEFB115Q30KQ5 88 aa22.68■■□□□ 1.22
PSEN1-207ENST00000553599 SH3D19Q5HYK7 790 aa22.68■■□□□ 1.22
PSEN1-207ENST00000553599 CLEC10AQ8IUN9 316 aa22.68■■□□□ 1.22
PSEN1-207ENST00000553599 FEZ1Q99689 392 aa22.68■■□□□ 1.22
PSEN1-207ENST00000553599 TMEM47Q9BQJ4 181 aa22.68■■□□□ 1.22
PSEN1-207ENST00000553599 KAT14Q9H8E8 782 aa22.68■■□□□ 1.22
PSEN1-207ENST00000553599 LY9Q9HBG7 655 aa22.68■■□□□ 1.22
PSEN1-207ENST00000553599 GOPCQ9HD26 462 aa22.68■■□□□ 1.22
PSEN1-207ENST00000553599 A0A1W2PRG0 241 aa22.67■■□□□ 1.22
PSEN1-207ENST00000553599 TRIM75PA6NK02 468 aa22.67■■□□□ 1.22
PSEN1-207ENST00000553599 HSPA6P17066 643 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms