RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 USP17L2Q6R6M4 530 aa28.26■■■□□ 2.11
TDP1-205ENST00000553527 ANKRD13CQ8N6S4 541 aa28.26■■■□□ 2.11
TDP1-205ENST00000553527 EMILIN3Q9NT22 766 aa28.26■■■□□ 2.11
TDP1-205ENST00000553527 GNAT2P19087 354 aa28.25■■■□□ 2.11
TDP1-205ENST00000553527 TDO2P48775 406 aa28.25■■■□□ 2.11
TDP1-205ENST00000553527 ZMYM1Q5SVZ6 1142 aa28.25■■■□□ 2.11
TDP1-205ENST00000553527 CENPQQ7L2Z9 268 aaPredicted RBP28.25■■■□□ 2.11
TDP1-205ENST00000553527 RILPL2Q969X0 211 aa28.25■■■□□ 2.11
TDP1-205ENST00000553527 ARPP21Q9UBL0 812 aaPredicted RBP28.25■■■□□ 2.11
TDP1-205ENST00000553527 PATL2C9JE40 543 aaKnown RBP28.24■■■□□ 2.11
TDP1-205ENST00000553527 AKR1B1P15121 316 aa28.24■■■□□ 2.11
TDP1-205ENST00000553527 IRX3P78415 501 aaPredicted RBP28.24■■■□□ 2.11
TDP1-205ENST00000553527 PLEKHM2Q8IWE5 1019 aa28.24■■■□□ 2.11
TDP1-205ENST00000553527 TRIM47Q96LD4 638 aa28.24■■■□□ 2.11
TDP1-205ENST00000553527 PTCH2Q9Y6C5 1203 aa28.24■■■□□ 2.11
TDP1-205ENST00000553527 CENPFP49454 3210 aa28.23■■■□□ 2.11
TDP1-205ENST00000553527 CCDC129Q6ZRS4 1044 aa28.23■■■□□ 2.11
TDP1-205ENST00000553527 C16orf86Q6ZW13 317 aa28.23■■■□□ 2.11
TDP1-205ENST00000553527 GIMAP6Q6P9H5 292 aa28.22■■■□□ 2.11
TDP1-205ENST00000553527 IFNL3Q8IZI9 196 aa28.22■■■□□ 2.11
TDP1-205ENST00000553527 EPB41L4AQ9HCS5 686 aaPredicted RBP28.22■■■□□ 2.11
TDP1-205ENST00000553527 FCGRTP55899 365 aa28.21■■■□□ 2.11
TDP1-205ENST00000553527 SBK1Q52WX2 424 aa28.21■■■□□ 2.11
TDP1-205ENST00000553527 TMEM179Q6ZVK1 233 aa28.21■■■□□ 2.11
TDP1-205ENST00000553527 CLEC10AQ8IUN9 316 aa28.21■■■□□ 2.11
TDP1-205ENST00000553527 P2RX7Q99572 595 aaKnown RBP28.21■■■□□ 2.11
TDP1-205ENST00000553527 DOCK3Q8IZD9 2030 aa28.2■■■□□ 2.11
TDP1-205ENST00000553527 HTTP42858 3142 aa28.2■■■□□ 2.11
TDP1-205ENST00000553527 GNRH1P01148 92 aa28.2■■■□□ 2.1
TDP1-205ENST00000553527 HOXD10P28358 340 aa28.2■■■□□ 2.1
TDP1-205ENST00000553527 HOXA7P31268 230 aaPredicted RBP28.2■■■□□ 2.1
TDP1-205ENST00000553527 USP14P54578 494 aa28.2■■■□□ 2.1
TDP1-205ENST00000553527 CCDC17Q96LX7 622 aa28.2■■■□□ 2.1
TDP1-205ENST00000553527 NACAP1Q9BZK3 213 aa28.2■■■□□ 2.1
TDP1-205ENST00000553527 KIAA1683Q9H0B3 1180 aa28.2■■■□□ 2.1
TDP1-205ENST00000553527 MKNK2Q9HBH9 465 aa28.2■■■□□ 2.1
TDP1-205ENST00000553527 A0A1W2PRG0 241 aa28.19■■■□□ 2.1
TDP1-205ENST00000553527 GCLCP48506 637 aaPredicted RBP28.19■■■□□ 2.1
TDP1-205ENST00000553527 PEX10O60683 326 aa28.18■■■□□ 2.1
TDP1-205ENST00000553527 MYCP01106 439 aaPredicted RBP28.18■■■□□ 2.1
TDP1-205ENST00000553527 ATP2B2Q01814 1243 aa28.18■■■□□ 2.1
TDP1-205ENST00000553527 SLC9C1Q4G0N8 1177 aa28.18■■■□□ 2.1
TDP1-205ENST00000553527 FAM227BQ96M60 508 aa28.18■■■□□ 2.1
TDP1-205ENST00000553527 NAPBQ9H115 298 aa28.18■■■□□ 2.1
TDP1-205ENST00000553527 SRRDQ9UH36 339 aa28.18■■■□□ 2.1
TDP1-205ENST00000553527 TAOK2Q9UL54 1235 aa28.18■■■□□ 2.1
TDP1-205ENST00000553527 HERVK_113P62684 666 aa28.17■■■□□ 2.1
TDP1-205ENST00000553527 MYPNQ86TC9 1320 aa28.17■■■□□ 2.1
TDP1-205ENST00000553527 USP17L15C9J2P7 530 aa28.16■■■□□ 2.1
TDP1-205ENST00000553527 USP17L13C9JLJ4 530 aa28.16■■■□□ 2.1
TDP1-205ENST00000553527 USP17L11C9JVI0 530 aa28.16■■■□□ 2.1
TDP1-205ENST00000553527 USP17L18D6R9N7 530 aa28.16■■■□□ 2.1
TDP1-205ENST00000553527 USP17L22D6RA61 530 aa28.16■■■□□ 2.1
TDP1-205ENST00000553527 USP17L17D6RBQ6 530 aa28.16■■■□□ 2.1
TDP1-205ENST00000553527 USP17L19D6RCP7 530 aa28.16■■■□□ 2.1
TDP1-205ENST00000553527 USP17L20D6RJB6 530 aa28.16■■■□□ 2.1
TDP1-205ENST00000553527 TNPO2O14787 897 aaKnown RBP28.16■■■□□ 2.1
TDP1-205ENST00000553527 VCAM1P19320 739 aa28.16■■■□□ 2.1
TDP1-205ENST00000553527 ICA1Q05084 483 aa28.16■■■□□ 2.1
TDP1-205ENST00000553527 USP17L24Q0WX57 530 aa28.16■■■□□ 2.1
TDP1-205ENST00000553527 FAM110CQ1W6H9 321 aa28.16■■■□□ 2.1
TDP1-205ENST00000553527 RAET1EQ8TD07 263 aa28.16■■■□□ 2.1
TDP1-205ENST00000553527 SH3TC2Q8TF17 1288 aa28.16■■■□□ 2.1
TDP1-205ENST00000553527 C12orf42Q96LP6 360 aa28.16■■■□□ 2.1
TDP1-205ENST00000553527 OSBPL3Q9H4L5 887 aa28.16■■■□□ 2.1
TDP1-205ENST00000553527 ARHGEF10LQ9HCE6 1279 aa28.16■■■□□ 2.1
TDP1-205ENST00000553527 PRMT2P55345 433 aa28.15■■■□□ 2.1
TDP1-205ENST00000553527 NBPF11Q86T75 865 aa28.15■■■□□ 2.1
TDP1-205ENST00000553527 PAGR1Q9BTK6 254 aa28.15■■■□□ 2.1
TDP1-205ENST00000553527 RPAP3Q9H6T3 665 aaPredicted RBP28.15■■■□□ 2.1
TDP1-205ENST00000553527 HELLSQ9NRZ9 838 aa28.15■■■□□ 2.1
TDP1-205ENST00000553527 GABRQQ9UN88 632 aa28.15■■■□□ 2.1
TDP1-205ENST00000553527 A0A0D9SFI3 127 aa28.14■■■□□ 2.1
TDP1-205ENST00000553527 PRDM1O75626 825 aa28.14■■■□□ 2.1
TDP1-205ENST00000553527 PRKCZQ05513 592 aa28.14■■■□□ 2.1
TDP1-205ENST00000553527 NMIQ13287 307 aaPredicted RBP28.14■■■□□ 2.1
TDP1-205ENST00000553527 MCMDC2Q4G0Z9 681 aa28.14■■■□□ 2.1
TDP1-205ENST00000553527 SIAH1Q8IUQ4 282 aa28.14■■■□□ 2.1
TDP1-205ENST00000553527 EEF2P13639 858 aaKnown RBP28.13■■■□□ 2.09
TDP1-205ENST00000553527 RASA1P20936 1047 aa28.13■■■□□ 2.09
TDP1-205ENST00000553527 VPS53Q5VIR6 699 aa28.13■■■□□ 2.09
TDP1-205ENST00000553527 CATSPERGQ6ZRH7 1159 aa28.13■■■□□ 2.09
TDP1-205ENST00000553527 ZNF444Q8N0Y2 327 aaPredicted RBP28.13■■■□□ 2.09
TDP1-205ENST00000553527 RAD21O60216 631 aa28.12■■■□□ 2.09
TDP1-205ENST00000553527 PDE4AP27815 886 aa28.12■■■□□ 2.09
TDP1-205ENST00000553527 SPICE1Q8N0Z3 855 aa28.12■■■□□ 2.09
TDP1-205ENST00000553527 COA7Q96BR5 231 aa28.12■■■□□ 2.09
TDP1-205ENST00000553527 ARMC5Q96C12 935 aa28.12■■■□□ 2.09
TDP1-205ENST00000553527 KANSL2Q9H9L4 492 aa28.12■■■□□ 2.09
TDP1-205ENST00000553527 TXNRD2Q9NNW7 524 aa28.12■■■□□ 2.09
TDP1-205ENST00000553527 SDSP20132 328 aa28.11■■■□□ 2.09
TDP1-205ENST00000553527 PPARAQ07869 468 aa28.11■■■□□ 2.09
TDP1-205ENST00000553527 KIAA1755Q5JYT7 1200 aa28.11■■■□□ 2.09
TDP1-205ENST00000553527 GPRC5AQ8NFJ5 357 aa28.11■■■□□ 2.09
TDP1-205ENST00000553527 ZNF287Q9HBT7 754 aa28.11■■■□□ 2.09
TDP1-205ENST00000553527 RBPJLQ9UBG7 517 aa28.11■■■□□ 2.09
TDP1-205ENST00000553527 FOXP2O15409 715 aa28.1■■■□□ 2.09
TDP1-205ENST00000553527 SLC3A2P08195 630 aaKnown RBP28.1■■■□□ 2.09
TDP1-205ENST00000553527 FLT3LGP49771 235 aa28.1■■■□□ 2.09
TDP1-205ENST00000553527 RGS19P49795 217 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms