RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 ERCC4Q92889 916 aaPredicted RBP9.44□□□□□ -0.9
CHPT1-208ENST00000552215 TMEM47Q9BQJ4 181 aa9.44□□□□□ -0.9
CHPT1-208ENST00000552215 BIN2Q9UBW5 565 aaPredicted RBP9.44□□□□□ -0.9
CHPT1-208ENST00000552215 ZBTB21Q9ULJ3 1066 aa9.44□□□□□ -0.9
CHPT1-208ENST00000552215 C4BP0C0L5 1744 aa9.44□□□□□ -0.9
CHPT1-208ENST00000552215 SPDYE2BA6NHP3 402 aa9.44□□□□□ -0.9
CHPT1-208ENST00000552215 PES1O00541 588 aaKnown RBP9.44□□□□□ -0.9
CHPT1-208ENST00000552215 WDHD1O75717 1129 aaPredicted RBP9.44□□□□□ -0.9
CHPT1-208ENST00000552215 POTEIP0CG38 1075 aa9.44□□□□□ -0.9
CHPT1-208ENST00000552215 POTEJP0CG39 1038 aa9.44□□□□□ -0.9
CHPT1-208ENST00000552215 SPDYE6P0CI01 402 aa9.44□□□□□ -0.9
CHPT1-208ENST00000552215 ALAS1P13196 640 aa9.44□□□□□ -0.9
CHPT1-208ENST00000552215 CDC27P30260 824 aa9.44□□□□□ -0.9
CHPT1-208ENST00000552215 MCM7P33993 719 aa9.44□□□□□ -0.9
CHPT1-208ENST00000552215 ANP32BQ92688 251 aaKnown RBP9.44□□□□□ -0.9
CHPT1-208ENST00000552215 TMEM87BQ96K49 555 aa9.44□□□□□ -0.9
CHPT1-208ENST00000552215 GPBP1L1Q9HC44 474 aaPredicted RBP9.44□□□□□ -0.9
CHPT1-208ENST00000552215 TRAK2O60296 914 aa9.43□□□□□ -0.9
CHPT1-208ENST00000552215 GRIN3BO60391 1043 aa9.43□□□□□ -0.9
CHPT1-208ENST00000552215 ANTXR2P58335 489 aa9.43□□□□□ -0.9
CHPT1-208ENST00000552215 PIK3AP1Q6ZUJ8 805 aa9.43□□□□□ -0.9
CHPT1-208ENST00000552215 TMTC2Q8N394 836 aa9.43□□□□□ -0.9
CHPT1-208ENST00000552215 SMCR8Q8TEV9 937 aaPredicted RBP9.43□□□□□ -0.9
CHPT1-208ENST00000552215 ARHGEF10LQ9HCE6 1279 aa9.43□□□□□ -0.9
CHPT1-208ENST00000552215 NMRK2Q9NPI5 230 aa9.43□□□□□ -0.9
CHPT1-208ENST00000552215 CICQ96RK0 1608 aaPredicted RBP9.43□□□□□ -0.9
CHPT1-208ENST00000552215 KRT85P78386 507 aa9.43□□□□□ -0.9
CHPT1-208ENST00000552215 ANP32EQ9BTT0 268 aa9.43□□□□□ -0.9
CHPT1-208ENST00000552215 BTBD18B2RXH4 712 aa9.43□□□□□ -0.9
CHPT1-208ENST00000552215 EPHX2P34913 555 aa9.43□□□□□ -0.9
CHPT1-208ENST00000552215 HMGCS2P54868 508 aa9.43□□□□□ -0.9
CHPT1-208ENST00000552215 CKAP2LQ8IYA6 745 aa9.43□□□□□ -0.9
CHPT1-208ENST00000552215 PIGSQ96S52 555 aa9.43□□□□□ -0.9
CHPT1-208ENST00000552215 GUCY1A2P33402 732 aa9.42□□□□□ -0.9
CHPT1-208ENST00000552215 LETM2Q2VYF4 491 aa9.42□□□□□ -0.9
CHPT1-208ENST00000552215 FAM83BQ5T0W9 1011 aa9.42□□□□□ -0.9
CHPT1-208ENST00000552215 EEPD1Q7L9B9 569 aa9.42□□□□□ -0.9
CHPT1-208ENST00000552215 RRP36Q96EU6 259 aaKnown RBP9.42□□□□□ -0.9
CHPT1-208ENST00000552215 FBXO28Q9NVF7 368 aa9.42□□□□□ -0.9
CHPT1-208ENST00000552215 BRWD3Q6RI45 1802 aa9.42□□□□□ -0.9
CHPT1-208ENST00000552215 DDX39AO00148 427 aaKnown RBP9.42□□□□□ -0.9
CHPT1-208ENST00000552215 BIN1O00499 593 aa9.42□□□□□ -0.9
CHPT1-208ENST00000552215 PEX10O60683 326 aa9.42□□□□□ -0.9
CHPT1-208ENST00000552215 NR5A1Q13285 461 aa9.42□□□□□ -0.9
CHPT1-208ENST00000552215 NRAPQ86VF7 1730 aa9.42□□□□□ -0.9
CHPT1-208ENST00000552215 SH2B2O14492 632 aaPredicted RBP9.42□□□□□ -0.9
CHPT1-208ENST00000552215 HOXA13P31271 388 aaPredicted RBP9.42□□□□□ -0.9
CHPT1-208ENST00000552215 HMGN5P82970 282 aaKnown RBP9.42□□□□□ -0.9
CHPT1-208ENST00000552215 CCDC73Q6ZRK6 1079 aa9.42□□□□□ -0.9
CHPT1-208ENST00000552215 GTF3C6Q969F1 213 aa9.42□□□□□ -0.9
CHPT1-208ENST00000552215 A0A087WWV3 80 aa9.42□□□□□ -0.9
CHPT1-208ENST00000552215 CALM1P0DP23 149 aa9.42□□□□□ -0.9
CHPT1-208ENST00000552215 CALM2P0DP24 149 aa9.42□□□□□ -0.9
CHPT1-208ENST00000552215 CALM3P0DP25 149 aa9.42□□□□□ -0.9
CHPT1-208ENST00000552215 ZSCAN22P10073 491 aaPredicted RBP9.42□□□□□ -0.9
CHPT1-208ENST00000552215 MYCLP12524 364 aaPredicted RBP9.42□□□□□ -0.9
CHPT1-208ENST00000552215 MCM4P33991 863 aa9.42□□□□□ -0.9
CHPT1-208ENST00000552215 KRT40Q6A162 431 aa9.42□□□□□ -0.9
CHPT1-208ENST00000552215 MB21D2Q8IYB1 491 aaPredicted RBP9.42□□□□□ -0.9
CHPT1-208ENST00000552215 DIS3L2Q8IYB7 885 aaKnown RBP9.42□□□□□ -0.9
CHPT1-208ENST00000552215 TMOD4Q9NZQ9 345 aa9.42□□□□□ -0.9
CHPT1-208ENST00000552215 CRYBG1Q9Y4K1 1723 aa9.42□□□□□ -0.9
CHPT1-208ENST00000552215 BAG4O95429 457 aaKnown RBP9.41□□□□□ -0.9
CHPT1-208ENST00000552215 CALML3P27482 149 aa9.41□□□□□ -0.9
CHPT1-208ENST00000552215 SMARCC2Q8TAQ2 1214 aa9.41□□□□□ -0.9
CHPT1-208ENST00000552215 CNKSR2Q8WXI2 1034 aa9.41□□□□□ -0.9
CHPT1-208ENST00000552215 SLC10A4Q96EP9 437 aa9.41□□□□□ -0.9
CHPT1-208ENST00000552215 RASA1P20936 1047 aa9.41□□□□□ -0.9
CHPT1-208ENST00000552215 SNX21Q969T3 373 aa9.41□□□□□ -0.9
CHPT1-208ENST00000552215 ZNF512BQ96KM6 892 aaPredicted RBP9.41□□□□□ -0.9
CHPT1-208ENST00000552215 CCDC43Q96MW1 224 aaKnown RBP9.41□□□□□ -0.9
CHPT1-208ENST00000552215 SAMM50Q9Y512 469 aa9.41□□□□□ -0.9
CHPT1-208ENST00000552215 RTL9Q8NET4 1388 aa9.41□□□□□ -0.9
CHPT1-208ENST00000552215 CHMP2AO43633 222 aa9.41□□□□□ -0.9
CHPT1-208ENST00000552215 CELF2O95319 508 aaKnown RBP9.41□□□□□ -0.9
CHPT1-208ENST00000552215 TTLL1O95922 423 aa9.41□□□□□ -0.9
CHPT1-208ENST00000552215 PTMAP06454 111 aaKnown RBP9.41□□□□□ -0.9
CHPT1-208ENST00000552215 RHBDL3P58872 404 aa9.41□□□□□ -0.9
CHPT1-208ENST00000552215 IRX3P78415 501 aaPredicted RBP9.41□□□□□ -0.9
CHPT1-208ENST00000552215 MTMR2Q13614 643 aa9.41□□□□□ -0.9
CHPT1-208ENST00000552215 HHIPL2Q6UWX4 724 aa9.41□□□□□ -0.9
CHPT1-208ENST00000552215 STAMQ92783 540 aa9.41□□□□□ -0.9
CHPT1-208ENST00000552215 PSMD1Q99460 953 aa9.41□□□□□ -0.9
CHPT1-208ENST00000552215 BMP2KQ9NSY1 1161 aaPredicted RBP9.41□□□□□ -0.9
CHPT1-208ENST00000552215 FAM198AQ9UFP1 575 aa9.41□□□□□ -0.9
CHPT1-208ENST00000552215 USP17L10C9JJH3 530 aa9.4□□□□□ -0.9
CHPT1-208ENST00000552215 UBE2SQ16763 222 aa9.4□□□□□ -0.9
CHPT1-208ENST00000552215 SUPT20HL1Q3ZLR7 823 aa9.4□□□□□ -0.9
CHPT1-208ENST00000552215 LY9Q9HBG7 655 aa9.4□□□□□ -0.9
CHPT1-208ENST00000552215 SERPINA10Q9UK55 444 aa9.4□□□□□ -0.9
CHPT1-208ENST00000552215 NUP98P52948 1817 aa9.4□□□□□ -0.9
CHPT1-208ENST00000552215 F5H6K3 240 aa9.4□□□□□ -0.9
CHPT1-208ENST00000552215 CDC25AP30304 524 aa9.4□□□□□ -0.9
CHPT1-208ENST00000552215 KLRC3Q07444 240 aa9.4□□□□□ -0.9
CHPT1-208ENST00000552215 HSP90AA4PQ58FG1 418 aa9.4□□□□□ -0.9
CHPT1-208ENST00000552215 DCAF15Q66K64 600 aa9.4□□□□□ -0.9
CHPT1-208ENST00000552215 ZDHHC15Q96MV8 337 aa9.4□□□□□ -0.9
CHPT1-208ENST00000552215 TM6SF1Q9BZW5 370 aa9.4□□□□□ -0.9
CHPT1-208ENST00000552215 TOP1P11387 765 aaKnown RBP9.4□□□□□ -0.9
CHPT1-208ENST00000552215 STAG1Q8WVM7 1258 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms