RNA–Protein interactions for RNA: ENST00000551176.1

ERBB3-218, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 277 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-218ENST00000551176 KIAA1755Q5JYT7 1200 aa9.14□□□□□ -0.95
ERBB3-218ENST00000551176 VPS53Q5VIR6 699 aa9.14□□□□□ -0.95
ERBB3-218ENST00000551176 GIMAP6Q6P9H5 292 aa9.14□□□□□ -0.95
ERBB3-218ENST00000551176 STK11IPQ8N1F8 1099 aa9.14□□□□□ -0.95
ERBB3-218ENST00000551176 ANKRD13CQ8N6S4 541 aa9.14□□□□□ -0.95
ERBB3-218ENST00000551176 C12orf42Q96LP6 360 aa9.14□□□□□ -0.95
ERBB3-218ENST00000551176 KIAA1683Q9H0B3 1180 aa9.14□□□□□ -0.95
ERBB3-218ENST00000551176 OSBPL3Q9H4L5 887 aa9.14□□□□□ -0.95
ERBB3-218ENST00000551176 ARPP21Q9UBL0 812 aaPredicted RBP9.14□□□□□ -0.95
ERBB3-218ENST00000551176 SWAP70Q9UH65 585 aa9.14□□□□□ -0.95
ERBB3-218ENST00000551176 PTCH2Q9Y6C5 1203 aa9.14□□□□□ -0.95
ERBB3-218ENST00000551176 NAV1Q8NEY1 1877 aa9.14□□□□□ -0.95
ERBB3-218ENST00000551176 ROBO3Q96MS0 1386 aa9.13□□□□□ -0.95
ERBB3-218ENST00000551176 BRCA2P51587 3418 aa9.13□□□□□ -0.95
ERBB3-218ENST00000551176 ZSWIM8A7E2V4 1837 aa9.13□□□□□ -0.95
ERBB3-218ENST00000551176 MINDY4BA8MYZ0 360 aa9.13□□□□□ -0.95
ERBB3-218ENST00000551176 PATL2C9JE40 543 aaKnown RBP9.13□□□□□ -0.95
ERBB3-218ENST00000551176 MPHOSPH10O00566 681 aaKnown RBP9.13□□□□□ -0.95
ERBB3-218ENST00000551176 APPP05067 770 aa9.13□□□□□ -0.95
ERBB3-218ENST00000551176 GNAT2P19087 354 aa9.13□□□□□ -0.95
ERBB3-218ENST00000551176 RASA1P20936 1047 aa9.13□□□□□ -0.95
ERBB3-218ENST00000551176 OSBPP22059 807 aa9.13□□□□□ -0.95
ERBB3-218ENST00000551176 SOX10P56693 466 aa9.13□□□□□ -0.95
ERBB3-218ENST00000551176 USP17L2Q6R6M4 530 aa9.13□□□□□ -0.95
ERBB3-218ENST00000551176 TMEM179Q6ZVK1 233 aa9.13□□□□□ -0.95
ERBB3-218ENST00000551176 IFNL3Q8IZI9 196 aa9.13□□□□□ -0.95
ERBB3-218ENST00000551176 SMCR8Q8TEV9 937 aaPredicted RBP9.13□□□□□ -0.95
ERBB3-218ENST00000551176 DDRGK1Q96HY6 314 aa9.13□□□□□ -0.95
ERBB3-218ENST00000551176 P2RX7Q99572 595 aaKnown RBP9.13□□□□□ -0.95
ERBB3-218ENST00000551176 TXNRD2Q9NNW7 524 aa9.13□□□□□ -0.95
ERBB3-218ENST00000551176 CABP5Q9NP86 173 aa9.13□□□□□ -0.95
ERBB3-218ENST00000551176 TMOD4Q9NZQ9 345 aa9.13□□□□□ -0.95
ERBB3-218ENST00000551176 TAOK2Q9UL54 1235 aa9.13□□□□□ -0.95
ERBB3-218ENST00000551176 TACC3Q9Y6A5 838 aa9.13□□□□□ -0.95
ERBB3-218ENST00000551176 LOC285556D6RIA3 1793 aa9.13□□□□□ -0.95
ERBB3-218ENST00000551176 MYH1P12882 1939 aa9.12□□□□□ -0.95
ERBB3-218ENST00000551176 VCAM1P19320 739 aa9.12□□□□□ -0.95
ERBB3-218ENST00000551176 TDO2P48775 406 aa9.12□□□□□ -0.95
ERBB3-218ENST00000551176 HERVK_113P62684 666 aa9.12□□□□□ -0.95
ERBB3-218ENST00000551176 NMIQ13287 307 aaPredicted RBP9.12□□□□□ -0.95
ERBB3-218ENST00000551176 LRRFIP1Q32MZ4 808 aaKnown RBP9.12□□□□□ -0.95
ERBB3-218ENST00000551176 ZNF589Q86UQ0 364 aaPredicted RBP9.12□□□□□ -0.95
ERBB3-218ENST00000551176 RILPL2Q969X0 211 aa9.12□□□□□ -0.95
ERBB3-218ENST00000551176 ARMC5Q96C12 935 aa9.12□□□□□ -0.95
ERBB3-218ENST00000551176 FEZ1Q99689 392 aa9.12□□□□□ -0.95
ERBB3-218ENST00000551176 INCENPQ9NQS7 918 aa9.12□□□□□ -0.95
ERBB3-218ENST00000551176 RBPJLQ9UBG7 517 aa9.12□□□□□ -0.95
ERBB3-218ENST00000551176 SRRDQ9UH36 339 aa9.12□□□□□ -0.95
ERBB3-218ENST00000551176 PNMA3Q9UL41 463 aa9.12□□□□□ -0.95
ERBB3-218ENST00000551176 GABRQQ9UN88 632 aa9.12□□□□□ -0.95
ERBB3-218ENST00000551176 ATAD5Q96QE3 1844 aa9.12□□□□□ -0.95
ERBB3-218ENST00000551176 PTPRFP10586 1907 aa9.11□□□□□ -0.95
ERBB3-218ENST00000551176 TRIM6-TRIM34B2RNG4 842 aa9.11□□□□□ -0.95
ERBB3-218ENST00000551176 PRDM1O75626 825 aa9.11□□□□□ -0.95
ERBB3-218ENST00000551176 CNMDO75829 334 aa9.11□□□□□ -0.95
ERBB3-218ENST00000551176 FMNL1O95466 1100 aaPredicted RBP9.11□□□□□ -0.95
ERBB3-218ENST00000551176 ATXN8OSP0DMR3 200 aa9.11□□□□□ -0.95
ERBB3-218ENST00000551176 EEF2P13639 858 aaKnown RBP9.11□□□□□ -0.95
ERBB3-218ENST00000551176 GSPT1P15170 499 aaKnown RBP9.11□□□□□ -0.95
ERBB3-218ENST00000551176 SDSP20132 328 aa9.11□□□□□ -0.95
ERBB3-218ENST00000551176 GCLCP48506 637 aaPredicted RBP9.11□□□□□ -0.95
ERBB3-218ENST00000551176 RGS19P49795 217 aa9.11□□□□□ -0.95
ERBB3-218ENST00000551176 FCGRTP55899 365 aa9.11□□□□□ -0.95
ERBB3-218ENST00000551176 IRX3P78415 501 aaPredicted RBP9.11□□□□□ -0.95
ERBB3-218ENST00000551176 ICA1Q05084 483 aa9.11□□□□□ -0.95
ERBB3-218ENST00000551176 PRKCZQ05513 592 aa9.11□□□□□ -0.95
ERBB3-218ENST00000551176 PABPC4Q13310 644 aaKnown RBP eCLIP9.11□□□□□ -0.95
ERBB3-218ENST00000551176 KIF22Q14807 665 aa9.11□□□□□ -0.95
ERBB3-218ENST00000551176 FAM110CQ1W6H9 321 aa9.11□□□□□ -0.95
ERBB3-218ENST00000551176 Q3C1V9 767 aa9.11□□□□□ -0.95
ERBB3-218ENST00000551176 CATSPERGQ6ZRH7 1159 aa9.11□□□□□ -0.95
ERBB3-218ENST00000551176 AMOTL1Q8IY63 956 aa9.11□□□□□ -0.95
ERBB3-218ENST00000551176 SH3TC2Q8TF17 1288 aa9.11□□□□□ -0.95
ERBB3-218ENST00000551176 CCDC17Q96LX7 622 aa9.11□□□□□ -0.95
ERBB3-218ENST00000551176 RPAP3Q9H6T3 665 aaPredicted RBP9.11□□□□□ -0.95
ERBB3-218ENST00000551176 HELLSQ9NRZ9 838 aa9.11□□□□□ -0.95
ERBB3-218ENST00000551176 MORF4L1Q9UBU8 362 aa9.11□□□□□ -0.95
ERBB3-218ENST00000551176 TMX2Q9Y320 296 aa9.11□□□□□ -0.95
ERBB3-218ENST00000551176 IGKV6D-41A0A0C4DH26 115 aa9.1□□□□□ -0.95
ERBB3-218ENST00000551176 POTEFA5A3E0 1075 aa9.1□□□□□ -0.95
ERBB3-218ENST00000551176 USP17L15C9J2P7 530 aa9.1□□□□□ -0.95
ERBB3-218ENST00000551176 USP17L13C9JLJ4 530 aa9.1□□□□□ -0.95
ERBB3-218ENST00000551176 USP17L11C9JVI0 530 aa9.1□□□□□ -0.95
ERBB3-218ENST00000551176 USP17L18D6R9N7 530 aa9.1□□□□□ -0.95
ERBB3-218ENST00000551176 USP17L22D6RA61 530 aa9.1□□□□□ -0.95
ERBB3-218ENST00000551176 USP17L17D6RBQ6 530 aa9.1□□□□□ -0.95
ERBB3-218ENST00000551176 USP17L19D6RCP7 530 aa9.1□□□□□ -0.95
ERBB3-218ENST00000551176 USP17L20D6RJB6 530 aa9.1□□□□□ -0.95
ERBB3-218ENST00000551176 GNRH1P01148 92 aa9.1□□□□□ -0.95
ERBB3-218ENST00000551176 USP14P54578 494 aa9.1□□□□□ -0.95
ERBB3-218ENST00000551176 CTDSPL2Q05D32 466 aa9.1□□□□□ -0.95
ERBB3-218ENST00000551176 PPARAQ07869 468 aa9.1□□□□□ -0.95
ERBB3-218ENST00000551176 USP17L24Q0WX57 530 aa9.1□□□□□ -0.95
ERBB3-218ENST00000551176 ARHGEF6Q15052 776 aa9.1□□□□□ -0.95
ERBB3-218ENST00000551176 MCMDC2Q4G0Z9 681 aa9.1□□□□□ -0.95
ERBB3-218ENST00000551176 SKAP1Q86WV1 359 aa9.1□□□□□ -0.95
ERBB3-218ENST00000551176 SPICE1Q8N0Z3 855 aa9.1□□□□□ -0.95
ERBB3-218ENST00000551176 ZNF333Q96JL9 665 aa9.1□□□□□ -0.95
ERBB3-218ENST00000551176 NACAP1Q9BZK3 213 aa9.1□□□□□ -0.95
ERBB3-218ENST00000551176 NAPBQ9H115 298 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms