RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 STAG1Q8WVM7 1258 aa17.05■□□□□ 0.32
PDE1B-207ENST00000550620 NACAP1Q9BZK3 213 aa17.05■□□□□ 0.32
PDE1B-207ENST00000550620 RASSF4Q9H2L5 321 aa17.05■□□□□ 0.32
PDE1B-207ENST00000550620 CABP5Q9NP86 173 aa17.05■□□□□ 0.32
PDE1B-207ENST00000550620 L1RE1Q9UN81 338 aa17.05■□□□□ 0.32
PDE1B-207ENST00000550620 ZNF330Q9Y3S2 320 aaPredicted RBP17.05■□□□□ 0.32
PDE1B-207ENST00000550620 GNAT2P19087 354 aa17.05■□□□□ 0.32
PDE1B-207ENST00000550620 CASP14P31944 242 aa17.05■□□□□ 0.32
PDE1B-207ENST00000550620 MAP3K12Q12852 859 aa17.05■□□□□ 0.32
PDE1B-207ENST00000550620 TRIM14Q14142 442 aa17.05■□□□□ 0.32
PDE1B-207ENST00000550620 NKX1-1Q15270 411 aaPredicted RBP17.05■□□□□ 0.32
PDE1B-207ENST00000550620 SH3RF1Q7Z6J0 888 aa17.05■□□□□ 0.32
PDE1B-207ENST00000550620 SLC35F6Q8N357 371 aa17.05■□□□□ 0.32
PDE1B-207ENST00000550620 DNAJC5Q9H3Z4 198 aa17.05■□□□□ 0.32
PDE1B-207ENST00000550620 TNS3Q68CZ2 1445 aa17.05■□□□□ 0.32
PDE1B-207ENST00000550620 PAPPAQ13219 1627 aa17.05■□□□□ 0.32
PDE1B-207ENST00000550620 MBD4O95243 580 aa17.04■□□□□ 0.32
PDE1B-207ENST00000550620 ATP2B1P20020 1258 aa17.04■□□□□ 0.32
PDE1B-207ENST00000550620 GYS2P54840 703 aa17.04■□□□□ 0.32
PDE1B-207ENST00000550620 CTSWP56202 376 aa17.04■□□□□ 0.32
PDE1B-207ENST00000550620 STX17P56962 302 aa17.04■□□□□ 0.32
PDE1B-207ENST00000550620 PPP2R5BQ15173 497 aa17.04■□□□□ 0.32
PDE1B-207ENST00000550620 TIAM2Q8IVF5 1701 aa17.04■□□□□ 0.32
PDE1B-207ENST00000550620 CABLES1Q8TDN4 633 aa17.04■□□□□ 0.32
PDE1B-207ENST00000550620 PAGE5Q96GU1 130 aa17.04■□□□□ 0.32
PDE1B-207ENST00000550620 PNKPQ96T60 521 aa17.04■□□□□ 0.32
PDE1B-207ENST00000550620 GREM2Q9H772 168 aa17.04■□□□□ 0.32
PDE1B-207ENST00000550620 ABCB6Q9NP58 842 aa17.04■□□□□ 0.32
PDE1B-207ENST00000550620 INCENPQ9NQS7 918 aa17.04■□□□□ 0.32
PDE1B-207ENST00000550620 SEC31BQ9NQW1 1179 aa17.04■□□□□ 0.32
PDE1B-207ENST00000550620 AFMP43652 599 aa17.04■□□□□ 0.32
PDE1B-207ENST00000550620 PHKA1P46020 1223 aa17.04■□□□□ 0.32
PDE1B-207ENST00000550620 AKAP17AQ02040 695 aaKnown RBP17.04■□□□□ 0.32
PDE1B-207ENST00000550620 SPAG1Q07617 926 aa17.04■□□□□ 0.32
PDE1B-207ENST00000550620 USP49Q70CQ1 688 aa17.04■□□□□ 0.32
PDE1B-207ENST00000550620 ANKRD20A12PQ8NF67 263 aa17.04■□□□□ 0.32
PDE1B-207ENST00000550620 FERMT2Q96AC1 680 aa17.04■□□□□ 0.32
PDE1B-207ENST00000550620 RNF41Q9H4P4 317 aaPredicted RBP17.04■□□□□ 0.32
PDE1B-207ENST00000550620 TOMM22Q9NS69 142 aa17.04■□□□□ 0.32
PDE1B-207ENST00000550620 GYPCP04921 128 aa17.03■□□□□ 0.32
PDE1B-207ENST00000550620 CD44P16070 742 aaKnown RBP17.03■□□□□ 0.32
PDE1B-207ENST00000550620 DPYDQ12882 1025 aa17.03■□□□□ 0.32
PDE1B-207ENST00000550620 RRP12Q5JTH9 1297 aaKnown RBP17.03■□□□□ 0.32
PDE1B-207ENST00000550620 CYP26C1Q6V0L0 522 aa17.03■□□□□ 0.32
PDE1B-207ENST00000550620 FAM71BQ8TC56 605 aa17.03■□□□□ 0.32
PDE1B-207ENST00000550620 LPIN2Q92539 896 aa17.03■□□□□ 0.32
PDE1B-207ENST00000550620 RNF26Q9BY78 433 aaPredicted RBP17.03■□□□□ 0.32
PDE1B-207ENST00000550620 MYO1CO00159 1063 aa17.02■□□□□ 0.32
PDE1B-207ENST00000550620 RPS6KA5O75582 802 aa17.02■□□□□ 0.32
PDE1B-207ENST00000550620 TDO2P48775 406 aa17.02■□□□□ 0.32
PDE1B-207ENST00000550620 PUM3Q15397 648 aaKnown RBP17.02■□□□□ 0.32
PDE1B-207ENST00000550620 MAGEB6Q8N7X4 407 aa17.02■□□□□ 0.32
PDE1B-207ENST00000550620 FANCBQ8NB91 859 aa17.02■□□□□ 0.32
PDE1B-207ENST00000550620 TRIM34Q9BYJ4 488 aa17.02■□□□□ 0.32
PDE1B-207ENST00000550620 ABHD10Q9NUJ1 306 aa17.02■□□□□ 0.32
PDE1B-207ENST00000550620 AKAP11Q9UKA4 1901 aa17.02■□□□□ 0.31
PDE1B-207ENST00000550620 ATF3P18847 181 aa17.02■□□□□ 0.31
PDE1B-207ENST00000550620 SRLQ86TD4 932 aa17.02■□□□□ 0.31
PDE1B-207ENST00000550620 ZNF654Q8IZM8 581 aa17.02■□□□□ 0.31
PDE1B-207ENST00000550620 CCDC82Q8N4S0 544 aa17.02■□□□□ 0.31
PDE1B-207ENST00000550620 OXER1Q8TDS5 423 aa17.02■□□□□ 0.31
PDE1B-207ENST00000550620 NUP133Q8WUM0 1156 aa17.02■□□□□ 0.31
PDE1B-207ENST00000550620 PYM1Q9BRP8 204 aaKnown RBP17.02■□□□□ 0.31
PDE1B-207ENST00000550620 ARMT1Q9H993 441 aa17.02■□□□□ 0.31
PDE1B-207ENST00000550620 PPP1R3GB7ZBB8 358 aa17.01■□□□□ 0.31
PDE1B-207ENST00000550620 RHOXF2BP0C7M4 288 aa17.01■□□□□ 0.31
PDE1B-207ENST00000550620 KRT2P35908 639 aa17.01■□□□□ 0.31
PDE1B-207ENST00000550620 FXR1P51114 621 aaKnown RBP eCLIP17.01■□□□□ 0.31
PDE1B-207ENST00000550620 CASP8Q14790 479 aa17.01■□□□□ 0.31
PDE1B-207ENST00000550620 GIGYF2Q6Y7W6 1299 aaKnown RBP17.01■□□□□ 0.31
PDE1B-207ENST00000550620 SPATA5Q8NB90 893 aa17.01■□□□□ 0.31
PDE1B-207ENST00000550620 SYMPKQ92797 1274 aaKnown RBP17.01■□□□□ 0.31
PDE1B-207ENST00000550620 RHOXF2Q9BQY4 288 aa17.01■□□□□ 0.31
PDE1B-207ENST00000550620 MED4Q9NPJ6 270 aa17.01■□□□□ 0.31
PDE1B-207ENST00000550620 LIMA1Q9UHB6 759 aaKnown RBP17.01■□□□□ 0.31
PDE1B-207ENST00000550620 RTL9Q8NET4 1388 aa17.01■□□□□ 0.31
PDE1B-207ENST00000550620 A0A0U1RQJ8 604 aa17.01■□□□□ 0.31
PDE1B-207ENST00000550620 GSG1L2A8MUP6 293 aa17.01■□□□□ 0.31
PDE1B-207ENST00000550620 N4BP3O15049 544 aa17.01■□□□□ 0.31
PDE1B-207ENST00000550620 MCM3P25205 808 aa17.01■□□□□ 0.31
PDE1B-207ENST00000550620 VSNL1P62760 191 aa17.01■□□□□ 0.31
PDE1B-207ENST00000550620 WDR93Q6P2C0 686 aa17.01■□□□□ 0.31
PDE1B-207ENST00000550620 ACRBPQ8NEB7 543 aa17.01■□□□□ 0.31
PDE1B-207ENST00000550620 ATRIPQ8WXE1 791 aa17.01■□□□□ 0.31
PDE1B-207ENST00000550620 EPSTI1Q96J88 318 aa17.01■□□□□ 0.31
PDE1B-207ENST00000550620 CDC5LQ99459 802 aaKnown RBP17.01■□□□□ 0.31
PDE1B-207ENST00000550620 ZKSCAN3Q9BRR0 538 aa17.01■□□□□ 0.31
PDE1B-207ENST00000550620 UBAC1Q9BSL1 405 aa17.01■□□□□ 0.31
PDE1B-207ENST00000550620 BRMS1Q9HCU9 246 aa17.01■□□□□ 0.31
PDE1B-207ENST00000550620 MROH5Q6ZUA9 1318 aa17■□□□□ 0.31
PDE1B-207ENST00000550620 A0A087X0B3 334 aa17■□□□□ 0.31
PDE1B-207ENST00000550620 NOM1Q5C9Z4 860 aaKnown RBP17■□□□□ 0.31
PDE1B-207ENST00000550620 NLRP10Q86W26 655 aa17■□□□□ 0.31
PDE1B-207ENST00000550620 CCDC102AQ96A19 550 aa17■□□□□ 0.31
PDE1B-207ENST00000550620 NUP88Q99567 741 aaPredicted RBP17■□□□□ 0.31
PDE1B-207ENST00000550620 MYO6Q9UM54 1294 aa17■□□□□ 0.31
PDE1B-207ENST00000550620 CTNND2Q9UQB3 1225 aa17■□□□□ 0.31
PDE1B-207ENST00000550620 FAN1Q9Y2M0 1017 aa17■□□□□ 0.31
PDE1B-207ENST00000550620 TACC3Q9Y6A5 838 aa17■□□□□ 0.31
PDE1B-207ENST00000550620 PNPLA7Q6ZV29 1317 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms