RNA–Protein interactions for RNA: ENST00000549554.1

TUBA1C-205, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-205ENST00000549554 ASCC2Q9H1I8 757 aaPredicted RBP23.75■■□□□ 1.39
TUBA1C-205ENST00000549554 PATL2C9JE40 543 aaKnown RBP23.74■■□□□ 1.39
TUBA1C-205ENST00000549554 FMNL1O95466 1100 aaPredicted RBP23.74■■□□□ 1.39
TUBA1C-205ENST00000549554 HOXA7P31268 230 aaPredicted RBP23.74■■□□□ 1.39
TUBA1C-205ENST00000549554 FCGRTP55899 365 aa23.74■■□□□ 1.39
TUBA1C-205ENST00000549554 SEPT2Q15019 361 aa23.74■■□□□ 1.39
TUBA1C-205ENST00000549554 C12orf42Q96LP6 360 aa23.74■■□□□ 1.39
TUBA1C-205ENST00000549554 SEC62Q99442 399 aaKnown RBP23.74■■□□□ 1.39
TUBA1C-205ENST00000549554 ARHGAP39Q9C0H5 1083 aa23.74■■□□□ 1.39
TUBA1C-205ENST00000549554 OSBPL3Q9H4L5 887 aa23.74■■□□□ 1.39
TUBA1C-205ENST00000549554 MINDY4BA8MYZ0 360 aa23.73■■□□□ 1.39
TUBA1C-205ENST00000549554 GUCY1A2P33402 732 aa23.73■■□□□ 1.39
TUBA1C-205ENST00000549554 CAP1Q01518 475 aa23.73■■□□□ 1.39
TUBA1C-205ENST00000549554 ZYXQ15942 572 aaKnown RBP23.73■■□□□ 1.39
TUBA1C-205ENST00000549554 PLEKHM2Q8IWE5 1019 aa23.73■■□□□ 1.39
TUBA1C-205ENST00000549554 ROBO3Q96MS0 1386 aa23.73■■□□□ 1.39
TUBA1C-205ENST00000549554 FAM110CQ1W6H9 321 aa23.72■■□□□ 1.39
TUBA1C-205ENST00000549554 IFNL3Q8IZI9 196 aa23.72■■□□□ 1.39
TUBA1C-205ENST00000549554 ANKRD13CQ8N6S4 541 aa23.72■■□□□ 1.39
TUBA1C-205ENST00000549554 RILPL2Q969X0 211 aa23.72■■□□□ 1.39
TUBA1C-205ENST00000549554 SH2D4AQ9H788 454 aa23.72■■□□□ 1.39
TUBA1C-205ENST00000549554 ZNF287Q9HBT7 754 aa23.72■■□□□ 1.39
TUBA1C-205ENST00000549554 ARHGEF10LQ9HCE6 1279 aa23.72■■□□□ 1.39
TUBA1C-205ENST00000549554 EPB41L4AQ9HCS5 686 aaPredicted RBP23.72■■□□□ 1.39
TUBA1C-205ENST00000549554 EMILIN3Q9NT22 766 aa23.72■■□□□ 1.39
TUBA1C-205ENST00000549554 ECM2O94769 699 aaPredicted RBP23.71■■□□□ 1.39
TUBA1C-205ENST00000549554 AKR1B1P15121 316 aa23.71■■□□□ 1.39
TUBA1C-205ENST00000549554 ACER1Q8TDN7 264 aa23.71■■□□□ 1.39
TUBA1C-205ENST00000549554 GTF3C2Q8WUA4 911 aaPredicted RBP23.71■■□□□ 1.39
TUBA1C-205ENST00000549554 TRIM47Q96LD4 638 aa23.71■■□□□ 1.39
TUBA1C-205ENST00000549554 NAPBQ9H115 298 aa23.71■■□□□ 1.39
TUBA1C-205ENST00000549554 MKNK2Q9HBH9 465 aa23.71■■□□□ 1.39
TUBA1C-205ENST00000549554 HELLSQ9NRZ9 838 aa23.71■■□□□ 1.39
TUBA1C-205ENST00000549554 ICA1Q05084 483 aa23.7■■□□□ 1.38
TUBA1C-205ENST00000549554 SRRDQ9UH36 339 aa23.7■■□□□ 1.38
TUBA1C-205ENST00000549554 PTCH2Q9Y6C5 1203 aa23.7■■□□□ 1.38
TUBA1C-205ENST00000549554 GREB1LQ9C091 1923 aaPredicted RBP23.69■■□□□ 1.38
TUBA1C-205ENST00000549554 USP17L15C9J2P7 530 aa23.69■■□□□ 1.38
TUBA1C-205ENST00000549554 USP17L13C9JLJ4 530 aa23.69■■□□□ 1.38
TUBA1C-205ENST00000549554 USP17L11C9JVI0 530 aa23.69■■□□□ 1.38
TUBA1C-205ENST00000549554 USP17L18D6R9N7 530 aa23.69■■□□□ 1.38
TUBA1C-205ENST00000549554 USP17L22D6RA61 530 aa23.69■■□□□ 1.38
TUBA1C-205ENST00000549554 USP17L17D6RBQ6 530 aa23.69■■□□□ 1.38
TUBA1C-205ENST00000549554 USP17L19D6RCP7 530 aa23.69■■□□□ 1.38
TUBA1C-205ENST00000549554 USP17L20D6RJB6 530 aa23.69■■□□□ 1.38
TUBA1C-205ENST00000549554 SMIM22K7EJ46 135 aa23.69■■□□□ 1.38
TUBA1C-205ENST00000549554 SLC3A2P08195 630 aaKnown RBP23.69■■□□□ 1.38
TUBA1C-205ENST00000549554 USP17L24Q0WX57 530 aa23.69■■□□□ 1.38
TUBA1C-205ENST00000549554 SLC9C1Q4G0N8 1177 aa23.69■■□□□ 1.38
TUBA1C-205ENST00000549554 NBPF11Q86T75 865 aa23.69■■□□□ 1.38
TUBA1C-205ENST00000549554 MYPNQ86TC9 1320 aa23.68■■□□□ 1.38
TUBA1C-205ENST00000549554 CTGFP29279 349 aa23.68■■□□□ 1.38
TUBA1C-205ENST00000549554 HERVK_113P62684 666 aa23.68■■□□□ 1.38
TUBA1C-205ENST00000549554 TNPO2O14787 897 aaKnown RBP23.67■■□□□ 1.38
TUBA1C-205ENST00000549554 VCAM1P19320 739 aa23.67■■□□□ 1.38
TUBA1C-205ENST00000549554 SOX10P56693 466 aa23.67■■□□□ 1.38
TUBA1C-205ENST00000549554 MCMDC2Q4G0Z9 681 aa23.67■■□□□ 1.38
TUBA1C-205ENST00000549554 CCDC129Q6ZRS4 1044 aa23.67■■□□□ 1.38
TUBA1C-205ENST00000549554 RAET1EQ8TD07 263 aa23.67■■□□□ 1.38
TUBA1C-205ENST00000549554 ARMC5Q96C12 935 aa23.67■■□□□ 1.38
TUBA1C-205ENST00000549554 P2RX7Q99572 595 aaKnown RBP23.67■■□□□ 1.38
TUBA1C-205ENST00000549554 KANSL2Q9H9L4 492 aa23.67■■□□□ 1.38
TUBA1C-205ENST00000549554 MORF4L1Q9UBU8 362 aa23.67■■□□□ 1.38
TUBA1C-205ENST00000549554 RBBP6Q7Z6E9 1792 aaKnown RBP23.67■■□□□ 1.38
TUBA1C-205ENST00000549554 PDE4BQ07343 736 aa23.66■■□□□ 1.38
TUBA1C-205ENST00000549554 STK11IPQ8N1F8 1099 aa23.66■■□□□ 1.38
TUBA1C-205ENST00000549554 COA7Q96BR5 231 aa23.66■■□□□ 1.38
TUBA1C-205ENST00000549554 MYH4Q9Y623 1939 aa23.66■■□□□ 1.38
TUBA1C-205ENST00000549554 A0A1W2PRG0 241 aa23.65■■□□□ 1.38
TUBA1C-205ENST00000549554 RASA1P20936 1047 aa23.65■■□□□ 1.38
TUBA1C-205ENST00000549554 MFAP1P55081 439 aaKnown RBP23.65■■□□□ 1.38
TUBA1C-205ENST00000549554 CATSPERGQ6ZRH7 1159 aa23.65■■□□□ 1.38
TUBA1C-205ENST00000549554 ZNF444Q8N0Y2 327 aaPredicted RBP23.65■■□□□ 1.38
TUBA1C-205ENST00000549554 LPAR1Q92633 364 aa23.65■■□□□ 1.38
TUBA1C-205ENST00000549554 FAM227BQ96M60 508 aa23.65■■□□□ 1.38
TUBA1C-205ENST00000549554 RPAP3Q9H6T3 665 aaPredicted RBP23.65■■□□□ 1.38
TUBA1C-205ENST00000549554 TMX2Q9Y320 296 aa23.65■■□□□ 1.38
TUBA1C-205ENST00000549554 DOCK3Q8IZD9 2030 aa23.65■■□□□ 1.38
TUBA1C-205ENST00000549554 A0A0D9SFI3 127 aa23.64■■□□□ 1.37
TUBA1C-205ENST00000549554 HIP1O00291 1037 aa23.64■■□□□ 1.37
TUBA1C-205ENST00000549554 RGS19P49795 217 aa23.64■■□□□ 1.37
TUBA1C-205ENST00000549554 ATP2B2Q01814 1243 aa23.64■■□□□ 1.37
TUBA1C-205ENST00000549554 PPARAQ07869 468 aa23.64■■□□□ 1.37
TUBA1C-205ENST00000549554 NMIQ13287 307 aaPredicted RBP23.64■■□□□ 1.37
TUBA1C-205ENST00000549554 GPRC5AQ8NFJ5 357 aa23.64■■□□□ 1.37
TUBA1C-205ENST00000549554 SDSP20132 328 aa23.63■■□□□ 1.37
TUBA1C-205ENST00000549554 PRKCZQ05513 592 aa23.63■■□□□ 1.37
TUBA1C-205ENST00000549554 CLEC10AQ8IUN9 316 aa23.63■■□□□ 1.37
TUBA1C-205ENST00000549554 VCPKMTQ9H867 229 aa23.63■■□□□ 1.37
TUBA1C-205ENST00000549554 DIAPH3Q9NSV4 1193 aa23.63■■□□□ 1.37
TUBA1C-205ENST00000549554 CCDC171Q6TFL3 1326 aa23.62■■□□□ 1.37
TUBA1C-205ENST00000549554 EEF2P13639 858 aaKnown RBP23.62■■□□□ 1.37
TUBA1C-205ENST00000549554 CCAR1Q8IX12 1150 aaKnown RBP23.62■■□□□ 1.37
TUBA1C-205ENST00000549554 PAGR1Q9BTK6 254 aa23.62■■□□□ 1.37
TUBA1C-205ENST00000549554 TANGO6Q9C0B7 1094 aa23.62■■□□□ 1.37
TUBA1C-205ENST00000549554 GOPCQ9HD26 462 aa23.62■■□□□ 1.37
TUBA1C-205ENST00000549554 PARP14Q460N5 1801 aa23.61■■□□□ 1.37
TUBA1C-205ENST00000549554 GRK4P32298 578 aa23.61■■□□□ 1.37
TUBA1C-205ENST00000549554 ERVK-9P63128 1117 aa23.61■■□□□ 1.37
TUBA1C-205ENST00000549554 ERVK-24P63145 666 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms