RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 JAKMIP3Q5VZ66 844 aa13.24□□□□□ -0.29
VDR-206ENST00000549336 KRT40Q6A162 431 aa13.24□□□□□ -0.29
VDR-206ENST00000549336 HHIPL2Q6UWX4 724 aa13.24□□□□□ -0.29
VDR-206ENST00000549336 AGBL3Q8NEM8 1001 aa13.24□□□□□ -0.29
VDR-206ENST00000549336 GCOM1H8Y6P7 765 aaPredicted RBP13.24□□□□□ -0.29
VDR-206ENST00000549336 POLR2MP0CAP2 368 aa13.24□□□□□ -0.29
VDR-206ENST00000549336 BMP3P12645 472 aa13.24□□□□□ -0.29
VDR-206ENST00000549336 ALAS1P13196 640 aa13.24□□□□□ -0.29
VDR-206ENST00000549336 MARCKSP29966 332 aaPredicted RBP13.24□□□□□ -0.29
VDR-206ENST00000549336 HDLBPQ00341 1268 aaKnown RBP13.24□□□□□ -0.29
VDR-206ENST00000549336 PIK3AP1Q6ZUJ8 805 aa13.24□□□□□ -0.29
VDR-206ENST00000549336 APBB1IPQ7Z5R6 666 aaPredicted RBP13.24□□□□□ -0.29
VDR-206ENST00000549336 FBXO33Q7Z6M2 555 aa13.24□□□□□ -0.29
VDR-206ENST00000549336 VPS33BQ9H267 617 aa13.24□□□□□ -0.29
VDR-206ENST00000549336 GDPD2Q9HCC8 539 aa13.24□□□□□ -0.29
VDR-206ENST00000549336 SMCO2A6NFE2 343 aa13.23□□□□□ -0.29
VDR-206ENST00000549336 LIFRP42702 1097 aa13.23□□□□□ -0.29
VDR-206ENST00000549336 RSBN1LQ6PCB5 846 aaPredicted RBP13.23□□□□□ -0.29
VDR-206ENST00000549336 SH3RF3Q8TEJ3 882 aaPredicted RBP13.23□□□□□ -0.29
VDR-206ENST00000549336 BICD1Q96G01 975 aa13.23□□□□□ -0.29
VDR-206ENST00000549336 PSTPIP2Q9H939 334 aa13.23□□□□□ -0.29
VDR-206ENST00000549336 ABT1Q9ULW3 272 aaKnown RBP13.23□□□□□ -0.29
VDR-206ENST00000549336 COL14A1Q05707 1796 aaKnown RBP13.23□□□□□ -0.29
VDR-206ENST00000549336 MYOM1P52179 1685 aa13.23□□□□□ -0.29
VDR-206ENST00000549336 ZFYVE27Q5T4F4 411 aa13.23□□□□□ -0.29
VDR-206ENST00000549336 HOMER2Q9NSB8 354 aa13.23□□□□□ -0.29
VDR-206ENST00000549336 CNOT7Q9UIV1 285 aaKnown RBP13.23□□□□□ -0.29
VDR-206ENST00000549336 MYCLP12524 364 aaPredicted RBP13.23□□□□□ -0.29
VDR-206ENST00000549336 SCG2P13521 617 aa13.23□□□□□ -0.29
VDR-206ENST00000549336 DNM1Q05193 864 aaKnown RBP13.23□□□□□ -0.29
VDR-206ENST00000549336 KCTD2Q14681 263 aa13.23□□□□□ -0.29
VDR-206ENST00000549336 TTC38Q5R3I4 469 aa13.23□□□□□ -0.29
VDR-206ENST00000549336 KRT26Q7Z3Y9 468 aa13.23□□□□□ -0.29
VDR-206ENST00000549336 ANKRD35Q8N283 1001 aa13.23□□□□□ -0.29
VDR-206ENST00000549336 PHKBQ93100 1093 aa13.23□□□□□ -0.29
VDR-206ENST00000549336 KCNG1Q9UIX4 513 aa13.23□□□□□ -0.29
VDR-206ENST00000549336 HACL1Q9UJ83 578 aa13.23□□□□□ -0.29
VDR-206ENST00000549336 PNPLA7Q6ZV29 1317 aa13.23□□□□□ -0.29
VDR-206ENST00000549336 POLRMTO00411 1230 aaKnown RBP13.22□□□□□ -0.29
VDR-206ENST00000549336 NALCNQ8IZF0 1738 aa13.22□□□□□ -0.29
VDR-206ENST00000549336 ASIC1P78348 528 aa13.22□□□□□ -0.29
VDR-206ENST00000549336 CCDC173Q0VFZ6 552 aa13.22□□□□□ -0.29
VDR-206ENST00000549336 POTEAQ6S8J7 498 aa13.22□□□□□ -0.29
VDR-206ENST00000549336 RNF26Q9BY78 433 aaPredicted RBP13.22□□□□□ -0.29
VDR-206ENST00000549336 SYCE3A1L190 88 aa13.22□□□□□ -0.29
VDR-206ENST00000549336 RDXP35241 583 aaKnown RBP13.22□□□□□ -0.29
VDR-206ENST00000549336 TDRD7Q8NHU6 1098 aaKnown RBP13.22□□□□□ -0.29
VDR-206ENST00000549336 AZI2Q9H6S1 392 aa13.22□□□□□ -0.29
VDR-206ENST00000549336 CCPG1Q9ULG6 757 aa13.22□□□□□ -0.29
VDR-206ENST00000549336 PSMA7O14818 248 aa13.22□□□□□ -0.29
VDR-206ENST00000549336 ENTPD3O75355 529 aa13.22□□□□□ -0.29
VDR-206ENST00000549336 FAM13AO94988 1023 aa13.22□□□□□ -0.29
VDR-206ENST00000549336 GDF11O95390 407 aa13.22□□□□□ -0.29
VDR-206ENST00000549336 LIG1P18858 919 aa13.22□□□□□ -0.29
VDR-206ENST00000549336 PPP1R2P41236 205 aa13.22□□□□□ -0.29
VDR-206ENST00000549336 KLHL40Q2TBA0 621 aa13.22□□□□□ -0.29
VDR-206ENST00000549336 CCDC40Q4G0X9 1142 aa13.22□□□□□ -0.29
VDR-206ENST00000549336 PNMA8AQ86V59 439 aaPredicted RBP13.22□□□□□ -0.29
VDR-206ENST00000549336 IBSPP21815 317 aaPredicted RBP13.21□□□□□ -0.29
VDR-206ENST00000549336 RFX5P48382 616 aaPredicted RBP13.21□□□□□ -0.29
VDR-206ENST00000549336 NOM1Q5C9Z4 860 aaKnown RBP13.21□□□□□ -0.29
VDR-206ENST00000549336 APOA5Q6Q788 366 aa13.21□□□□□ -0.29
VDR-206ENST00000549336 MICALL2Q8IY33 904 aa13.21□□□□□ -0.29
VDR-206ENST00000549336 STAG1Q8WVM7 1258 aa13.21□□□□□ -0.29
VDR-206ENST00000549336 DCP1AQ9NPI6 582 aaPredicted RBP13.21□□□□□ -0.29
VDR-206ENST00000549336 ROBO1Q9Y6N7 1651 aa13.21□□□□□ -0.29
VDR-206ENST00000549336 CCNT1O60563 726 aaKnown RBP13.21□□□□□ -0.29
VDR-206ENST00000549336 ANO1Q5XXA6 986 aa13.21□□□□□ -0.29
VDR-206ENST00000549336 HS2ST1Q7LGA3 356 aa13.21□□□□□ -0.29
VDR-206ENST00000549336 FERMT2Q96AC1 680 aa13.21□□□□□ -0.29
VDR-206ENST00000549336 PCDHA1Q9Y5I3 950 aa13.21□□□□□ -0.29
VDR-206ENST00000549336 STAT2P52630 851 aa13.21□□□□□ -0.3
VDR-206ENST00000549336 SPAG1Q07617 926 aa13.21□□□□□ -0.3
VDR-206ENST00000549336 ZNF174Q15697 407 aa13.21□□□□□ -0.3
VDR-206ENST00000549336 VPS36Q86VN1 386 aa13.21□□□□□ -0.3
VDR-206ENST00000549336 ADD3Q9UEY8 706 aaKnown RBP13.21□□□□□ -0.3
VDR-206ENST00000549336 SERPINA10Q9UK55 444 aa13.21□□□□□ -0.3
VDR-206ENST00000549336 CNPY2Q9Y2B0 182 aa13.21□□□□□ -0.3
VDR-206ENST00000549336 RABGAP1Q9Y3P9 1069 aa13.21□□□□□ -0.3
VDR-206ENST00000549336 MIGA2Q7L4E1 593 aa13.2□□□□□ -0.3
VDR-206ENST00000549336 BLIDQ8IZY5 108 aa13.2□□□□□ -0.3
VDR-206ENST00000549336 NSUN4Q96CB9 384 aaKnown RBP13.2□□□□□ -0.3
VDR-206ENST00000549336 NOD1Q9Y239 953 aa13.2□□□□□ -0.3
VDR-206ENST00000549336 USP17L5A8MUK1 530 aa13.2□□□□□ -0.3
VDR-206ENST00000549336 FRMPD2Q68DX3 1309 aaPredicted RBP13.2□□□□□ -0.3
VDR-206ENST00000549336 MTIF2P46199 727 aaKnown RBP13.2□□□□□ -0.3
VDR-206ENST00000549336 ARHGEF16Q5VV41 709 aa13.2□□□□□ -0.3
VDR-206ENST00000549336 NCAPG2Q86XI2 1143 aa13.2□□□□□ -0.3
VDR-206ENST00000549336 TMEM87AQ8NBN3 555 aa13.2□□□□□ -0.3
VDR-206ENST00000549336 A0A0U1RQG5 324 aaPredicted RBP13.2□□□□□ -0.3
VDR-206ENST00000549336 PDIA3P30101 505 aaKnown RBP13.2□□□□□ -0.3
VDR-206ENST00000549336 ME3Q16798 604 aa13.2□□□□□ -0.3
VDR-206ENST00000549336 PIK3C2AO00443 1686 aa13.19□□□□□ -0.3
VDR-206ENST00000549336 FDX1P10109 184 aa13.19□□□□□ -0.3
VDR-206ENST00000549336 HOXA10P31260 410 aaPredicted RBP13.19□□□□□ -0.3
VDR-206ENST00000549336 ADD1P35611 737 aaKnown RBP13.19□□□□□ -0.3
VDR-206ENST00000549336 PDE4CQ08493 712 aa13.19□□□□□ -0.3
VDR-206ENST00000549336 SV2BQ7L1I2 683 aa13.19□□□□□ -0.3
VDR-206ENST00000549336 DHX58Q96C10 678 aa13.19□□□□□ -0.3
VDR-206ENST00000549336 WRNIP1Q96S55 665 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms