RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 LETM1O95202 739 aaPredicted RBP19.28■□□□□ 0.68
CHMP1A-204ENST00000547687 BAG3O95817 575 aa19.28■□□□□ 0.68
CHMP1A-204ENST00000547687 CTR9Q6PD62 1173 aa19.28■□□□□ 0.68
CHMP1A-204ENST00000547687 SH3RF3Q8TEJ3 882 aaPredicted RBP19.28■□□□□ 0.68
CHMP1A-204ENST00000547687 STAG1Q8WVM7 1258 aa19.28■□□□□ 0.68
CHMP1A-204ENST00000547687 HHIPL1Q96JK4 782 aa19.28■□□□□ 0.68
CHMP1A-204ENST00000547687 TSPY26PQ9H489 355 aa19.28■□□□□ 0.68
CHMP1A-204ENST00000547687 ATP8A2Q9NTI2 1148 aa19.28■□□□□ 0.68
CHMP1A-204ENST00000547687 TFIP11Q9UBB9 837 aaKnown RBP19.28■□□□□ 0.68
CHMP1A-204ENST00000547687 ELP1O95163 1332 aa19.28■□□□□ 0.68
CHMP1A-204ENST00000547687 FAM155AB1AL88 458 aaPredicted RBP19.27■□□□□ 0.68
CHMP1A-204ENST00000547687 USP17L12C9JPN9 530 aa19.27■□□□□ 0.68
CHMP1A-204ENST00000547687 USP17L21D6R901 530 aa19.27■□□□□ 0.68
CHMP1A-204ENST00000547687 PPP4CP60510 307 aa19.27■□□□□ 0.68
CHMP1A-204ENST00000547687 RASA3Q14644 834 aa19.27■□□□□ 0.68
CHMP1A-204ENST00000547687 NBPF12Q5TAG4 269 aaPredicted RBP19.27■□□□□ 0.68
CHMP1A-204ENST00000547687 NOL10Q9BSC4 688 aaKnown RBP19.27■□□□□ 0.68
CHMP1A-204ENST00000547687 ANAPC4Q9UJX5 808 aa19.27■□□□□ 0.68
CHMP1A-204ENST00000547687 BTDP43251 543 aa19.27■□□□□ 0.67
CHMP1A-204ENST00000547687 CCDC173Q0VFZ6 552 aa19.27■□□□□ 0.67
CHMP1A-204ENST00000547687 CNNM2Q9H8M5 875 aa19.27■□□□□ 0.67
CHMP1A-204ENST00000547687 GPR75-ASB3A0A0A6YYF3 556 aa19.26■□□□□ 0.67
CHMP1A-204ENST00000547687 DHX16O60231 1041 aaKnown RBP19.26■□□□□ 0.67
CHMP1A-204ENST00000547687 KDM4AO75164 1064 aa19.26■□□□□ 0.67
CHMP1A-204ENST00000547687 NF2P35240 595 aa19.26■□□□□ 0.67
CHMP1A-204ENST00000547687 MKRN3Q13064 507 aaKnown RBP19.26■□□□□ 0.67
CHMP1A-204ENST00000547687 FAM43AQ8N2R8 423 aa19.26■□□□□ 0.67
CHMP1A-204ENST00000547687 FAM163AQ96GL9 167 aaPredicted RBP19.26■□□□□ 0.67
CHMP1A-204ENST00000547687 SPATA32Q96LK8 384 aa19.26■□□□□ 0.67
CHMP1A-204ENST00000547687 TMEM39BQ9GZU3 492 aa19.26■□□□□ 0.67
CHMP1A-204ENST00000547687 TOMM22Q9NS69 142 aa19.26■□□□□ 0.67
CHMP1A-204ENST00000547687 ZSWIM5Q9P217 1185 aa19.26■□□□□ 0.67
CHMP1A-204ENST00000547687 SUGT1Q9Y2Z0 365 aa19.26■□□□□ 0.67
CHMP1A-204ENST00000547687 GOLGA8BA8MQT2 603 aa19.25■□□□□ 0.67
CHMP1A-204ENST00000547687 FOSBP53539 338 aa19.25■□□□□ 0.67
CHMP1A-204ENST00000547687 EVX2Q03828 476 aa19.25■□□□□ 0.67
CHMP1A-204ENST00000547687 RRP12Q5JTH9 1297 aaKnown RBP19.25■□□□□ 0.67
CHMP1A-204ENST00000547687 APOBEC3HQ6NTF7 200 aaKnown RBP19.25■□□□□ 0.67
CHMP1A-204ENST00000547687 SLF2Q8IX21 1173 aa19.25■□□□□ 0.67
CHMP1A-204ENST00000547687 PPP1R9BQ96SB3 815 aa19.25■□□□□ 0.67
CHMP1A-204ENST00000547687 KRT23Q9C075 422 aa19.25■□□□□ 0.67
CHMP1A-204ENST00000547687 ANGEL1Q9UNK9 670 aaKnown RBP19.25■□□□□ 0.67
CHMP1A-204ENST00000547687 HPS5Q9UPZ3 1129 aa19.25■□□□□ 0.67
CHMP1A-204ENST00000547687 GAKO14976 1311 aa19.25■□□□□ 0.67
CHMP1A-204ENST00000547687 USP5P45974 858 aa19.25■□□□□ 0.67
CHMP1A-204ENST00000547687 MAP2K1Q02750 393 aaPredicted RBP19.25■□□□□ 0.67
CHMP1A-204ENST00000547687 LEO1Q8WVC0 666 aaPredicted RBP19.25■□□□□ 0.67
CHMP1A-204ENST00000547687 RNF41Q9H4P4 317 aaPredicted RBP19.25■□□□□ 0.67
CHMP1A-204ENST00000547687 OTOFQ9HC10 1997 aa19.25■□□□□ 0.67
CHMP1A-204ENST00000547687 PPFIA3O75145 1194 aa19.24■□□□□ 0.67
CHMP1A-204ENST00000547687 RASAL3Q86YV0 1011 aa19.24■□□□□ 0.67
CHMP1A-204ENST00000547687 ZDHHC15Q96MV8 337 aa19.24■□□□□ 0.67
CHMP1A-204ENST00000547687 MCM9Q9NXL9 1143 aa19.24■□□□□ 0.67
CHMP1A-204ENST00000547687 DAGLAQ9Y4D2 1042 aa19.24■□□□□ 0.67
CHMP1A-204ENST00000547687 CDK5RAP2Q96SN8 1893 aa19.24■□□□□ 0.67
CHMP1A-204ENST00000547687 FDPSP14324 419 aaKnown RBP19.24■□□□□ 0.67
CHMP1A-204ENST00000547687 MAP2K2P36507 400 aa19.24■□□□□ 0.67
CHMP1A-204ENST00000547687 TGFBRAP1Q8WUH2 860 aa19.24■□□□□ 0.67
CHMP1A-204ENST00000547687 CFAP45Q9UL16 551 aa19.24■□□□□ 0.67
CHMP1A-204ENST00000547687 CASP8AP2Q9UKL3 1982 aa19.23■□□□□ 0.67
CHMP1A-204ENST00000547687 LAMB1P07942 1786 aa19.23■□□□□ 0.67
CHMP1A-204ENST00000547687 SH2B2O14492 632 aaPredicted RBP19.23■□□□□ 0.67
CHMP1A-204ENST00000547687 SLC10A3P09131 477 aa19.23■□□□□ 0.67
CHMP1A-204ENST00000547687 CYP2D6P10635 497 aa19.23■□□□□ 0.67
CHMP1A-204ENST00000547687 LBX1P52954 281 aa19.23■□□□□ 0.67
CHMP1A-204ENST00000547687 FKBP1BP68106 108 aa19.23■□□□□ 0.67
CHMP1A-204ENST00000547687 HDLBPQ00341 1268 aaKnown RBP19.23■□□□□ 0.67
CHMP1A-204ENST00000547687 KIF23Q02241 960 aaPredicted RBP19.23■□□□□ 0.67
CHMP1A-204ENST00000547687 IGDCC4Q8TDY8 1250 aa19.23■□□□□ 0.67
CHMP1A-204ENST00000547687 TMEM87BQ96K49 555 aa19.23■□□□□ 0.67
CHMP1A-204ENST00000547687 ARPP21Q9UBL0 812 aaPredicted RBP19.23■□□□□ 0.67
CHMP1A-204ENST00000547687 GOLGA6L4A6NEF3 574 aa19.22■□□□□ 0.67
CHMP1A-204ENST00000547687 NOGQ13253 232 aa19.22■□□□□ 0.67
CHMP1A-204ENST00000547687 SBK1Q52WX2 424 aa19.22■□□□□ 0.67
CHMP1A-204ENST00000547687 HHIPL2Q6UWX4 724 aa19.22■□□□□ 0.67
CHMP1A-204ENST00000547687 CERS3Q8IU89 383 aa19.22■□□□□ 0.67
CHMP1A-204ENST00000547687 TRIM44Q96DX7 344 aaPredicted RBP19.22■□□□□ 0.67
CHMP1A-204ENST00000547687 CPLX1O14810 134 aa19.22■□□□□ 0.67
CHMP1A-204ENST00000547687 RHBDL3P58872 404 aa19.22■□□□□ 0.67
CHMP1A-204ENST00000547687 SLC4A8Q2Y0W8 1093 aa19.22■□□□□ 0.67
CHMP1A-204ENST00000547687 RAB11FIP4Q86YS3 637 aa19.22■□□□□ 0.67
CHMP1A-204ENST00000547687 CCDC102AQ96A19 550 aa19.22■□□□□ 0.67
CHMP1A-204ENST00000547687 CLMNQ96JQ2 1002 aa19.22■□□□□ 0.67
CHMP1A-204ENST00000547687 TEPSINQ96N21 525 aa19.22■□□□□ 0.67
CHMP1A-204ENST00000547687 SENP2Q9HC62 589 aa19.22■□□□□ 0.67
CHMP1A-204ENST00000547687 PRDM1O75626 825 aa19.21■□□□□ 0.67
CHMP1A-204ENST00000547687 PLCG2P16885 1265 aa19.21■□□□□ 0.67
CHMP1A-204ENST00000547687 ARMC9Q7Z3E5 817 aa19.21■□□□□ 0.67
CHMP1A-204ENST00000547687 MAPKAPK5Q8IW41 473 aa19.21■□□□□ 0.67
CHMP1A-204ENST00000547687 TEX11Q8IYF3 940 aa19.21■□□□□ 0.67
CHMP1A-204ENST00000547687 RNF214Q8ND24 703 aa19.21■□□□□ 0.67
CHMP1A-204ENST00000547687 BEGAINQ9BUH8 593 aa19.21■□□□□ 0.67
CHMP1A-204ENST00000547687 PPP2R3BQ9Y5P8 575 aa19.21■□□□□ 0.67
CHMP1A-204ENST00000547687 FGRP09769 529 aa19.2■□□□□ 0.66
CHMP1A-204ENST00000547687 GUCY1B3Q02153 619 aa19.2■□□□□ 0.66
CHMP1A-204ENST00000547687 TNFAIP1Q13829 316 aa19.2■□□□□ 0.66
CHMP1A-204ENST00000547687 TMEM67Q5HYA8 995 aa19.2■□□□□ 0.66
CHMP1A-204ENST00000547687 ZKSCAN3Q9BRR0 538 aa19.2■□□□□ 0.66
CHMP1A-204ENST00000547687 LY9Q9HBG7 655 aa19.2■□□□□ 0.66
CHMP1A-204ENST00000547687 ORC3Q9UBD5 711 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms