RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 CYP46A1Q9Y6A2 500 aa15.3■□□□□ 0.04
CDCA3-210ENST00000545368 MYH4Q9Y623 1939 aa15.29■□□□□ 0.04
CDCA3-210ENST00000545368 IGKV6D-41A0A0C4DH26 115 aa15.29■□□□□ 0.04
CDCA3-210ENST00000545368 SPDYE5A6NIY4 337 aa15.29■□□□□ 0.04
CDCA3-210ENST00000545368 IFIT3O14879 490 aaKnown RBP15.29■□□□□ 0.04
CDCA3-210ENST00000545368 TTLL1O95922 423 aa15.29■□□□□ 0.04
CDCA3-210ENST00000545368 RPS6KB1P23443 525 aa15.29■□□□□ 0.04
CDCA3-210ENST00000545368 GUCY1A2P33402 732 aa15.29■□□□□ 0.04
CDCA3-210ENST00000545368 JAG1P78504 1218 aa15.29■□□□□ 0.04
CDCA3-210ENST00000545368 FGD1P98174 961 aa15.29■□□□□ 0.04
CDCA3-210ENST00000545368 ATP2B2Q01814 1243 aa15.29■□□□□ 0.04
CDCA3-210ENST00000545368 RUFY3Q7L099 469 aa15.29■□□□□ 0.04
CDCA3-210ENST00000545368 CHST3Q7LGC8 479 aa15.29■□□□□ 0.04
CDCA3-210ENST00000545368 ERO1BQ86YB8 467 aa15.29■□□□□ 0.04
CDCA3-210ENST00000545368 TMEM87BQ96K49 555 aa15.29■□□□□ 0.04
CDCA3-210ENST00000545368 ZSCAN10Q96SZ4 725 aaPredicted RBP15.29■□□□□ 0.04
CDCA3-210ENST00000545368 ZKSCAN3Q9BRR0 538 aa15.29■□□□□ 0.04
CDCA3-210ENST00000545368 SH2D4AQ9H788 454 aa15.29■□□□□ 0.04
CDCA3-210ENST00000545368 ZSWIM6Q9HCJ5 1215 aa15.29■□□□□ 0.04
CDCA3-210ENST00000545368 MTMR4Q9NYA4 1195 aa15.29■□□□□ 0.04
CDCA3-210ENST00000545368 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.29■□□□□ 0.04
CDCA3-210ENST00000545368 STX8Q9UNK0 236 aa15.29■□□□□ 0.04
CDCA3-210ENST00000545368 PHIPQ8WWQ0 1821 aa15.29■□□□□ 0.04
CDCA3-210ENST00000545368 NMT2O60551 498 aa15.28■□□□□ 0.04
CDCA3-210ENST00000545368 ANTXR2P58335 489 aa15.28■□□□□ 0.04
CDCA3-210ENST00000545368 PPATQ06203 517 aa15.28■□□□□ 0.04
CDCA3-210ENST00000545368 WTAPQ15007 396 aa15.28■□□□□ 0.04
CDCA3-210ENST00000545368 TMEM67Q5HYA8 995 aa15.28■□□□□ 0.04
CDCA3-210ENST00000545368 DGKHQ86XP1 1220 aa15.28■□□□□ 0.04
CDCA3-210ENST00000545368 NKX2-3Q8TAU0 364 aa15.28■□□□□ 0.04
CDCA3-210ENST00000545368 OPTNQ96CV9 577 aa15.28■□□□□ 0.04
CDCA3-210ENST00000545368 OTUD5Q96G74 571 aa15.28■□□□□ 0.04
CDCA3-210ENST00000545368 TTC14Q96N46 770 aa15.28■□□□□ 0.04
CDCA3-210ENST00000545368 FEZ1Q99689 392 aa15.28■□□□□ 0.04
CDCA3-210ENST00000545368 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.28■□□□□ 0.04
CDCA3-210ENST00000545368 UPF3BQ9BZI7 483 aaKnown RBP15.28■□□□□ 0.04
CDCA3-210ENST00000545368 IL17RBQ9NRM6 502 aa15.28■□□□□ 0.04
CDCA3-210ENST00000545368 NYAP2Q9P242 653 aa15.28■□□□□ 0.04
CDCA3-210ENST00000545368 ZHX2Q9Y6X8 837 aa15.28■□□□□ 0.04
CDCA3-210ENST00000545368 CPA1P15085 419 aa15.27■□□□□ 0.04
CDCA3-210ENST00000545368 ZNF157P51786 506 aaPredicted RBP15.27■□□□□ 0.04
CDCA3-210ENST00000545368 EXOSC10Q01780 885 aaKnown RBP15.27■□□□□ 0.04
CDCA3-210ENST00000545368 PPIL2Q13356 520 aa15.27■□□□□ 0.04
CDCA3-210ENST00000545368 RABEP1Q15276 862 aa15.27■□□□□ 0.04
CDCA3-210ENST00000545368 IFIT1BQ5T764 474 aaKnown RBP15.27■□□□□ 0.04
CDCA3-210ENST00000545368 RGMBQ6NW40 437 aa15.27■□□□□ 0.04
CDCA3-210ENST00000545368 CCDC84Q86UT8 332 aaPredicted RBP15.27■□□□□ 0.04
CDCA3-210ENST00000545368 CLEC10AQ8IUN9 316 aa15.27■□□□□ 0.04
CDCA3-210ENST00000545368 ZNF280CQ8ND82 737 aa15.27■□□□□ 0.04
CDCA3-210ENST00000545368 HHIPL1Q96JK4 782 aa15.27■□□□□ 0.04
CDCA3-210ENST00000545368 TCEANC2Q96MN5 208 aa15.27■□□□□ 0.04
CDCA3-210ENST00000545368 WDR18Q9BV38 432 aa15.27■□□□□ 0.04
CDCA3-210ENST00000545368 PDRG1Q9NUG6 133 aa15.27■□□□□ 0.04
CDCA3-210ENST00000545368 SH2B2O14492 632 aaPredicted RBP15.26■□□□□ 0.03
CDCA3-210ENST00000545368 EEF2P13639 858 aaKnown RBP15.26■□□□□ 0.03
CDCA3-210ENST00000545368 PAXIP1Q6ZW49 1069 aaPredicted RBP15.26■□□□□ 0.03
CDCA3-210ENST00000545368 ENAHQ8N8S7 591 aaPredicted RBP15.26■□□□□ 0.03
CDCA3-210ENST00000545368 IL27Q8NEV9 243 aa15.26■□□□□ 0.03
CDCA3-210ENST00000545368 WNK4Q96J92 1243 aa15.26■□□□□ 0.03
CDCA3-210ENST00000545368 LRRC2Q9BYS8 371 aa15.26■□□□□ 0.03
CDCA3-210ENST00000545368 KAT14Q9H8E8 782 aa15.26■□□□□ 0.03
CDCA3-210ENST00000545368 CLIP2Q9UDT6 1046 aa15.26■□□□□ 0.03
CDCA3-210ENST00000545368 SYNPO2Q9UMS6 1093 aa15.26■□□□□ 0.03
CDCA3-210ENST00000545368 TRIM75PA6NK02 468 aa15.25■□□□□ 0.03
CDCA3-210ENST00000545368 USP17L10C9JJH3 530 aa15.25■□□□□ 0.03
CDCA3-210ENST00000545368 ZBTB48P10074 688 aaPredicted RBP15.25■□□□□ 0.03
CDCA3-210ENST00000545368 TOP1P11387 765 aaKnown RBP15.25■□□□□ 0.03
CDCA3-210ENST00000545368 NOVP48745 357 aa15.25■□□□□ 0.03
CDCA3-210ENST00000545368 NEK4P51957 841 aa15.25■□□□□ 0.03
CDCA3-210ENST00000545368 USP14P54578 494 aa15.25■□□□□ 0.03
CDCA3-210ENST00000545368 SPP2Q13103 211 aa15.25■□□□□ 0.03
CDCA3-210ENST00000545368 COL9A3Q14050 684 aaPredicted RBP15.25■□□□□ 0.03
CDCA3-210ENST00000545368 SEC23AQ15436 765 aa15.25■□□□□ 0.03
CDCA3-210ENST00000545368 NFXL1Q6ZNB6 911 aa15.25■□□□□ 0.03
CDCA3-210ENST00000545368 Q6ZUG5 572 aa15.25■□□□□ 0.03
CDCA3-210ENST00000545368 RASAL3Q86YV0 1011 aa15.25■□□□□ 0.03
CDCA3-210ENST00000545368 TMTC2Q8N394 836 aa15.25■□□□□ 0.03
CDCA3-210ENST00000545368 IGDCC4Q8TDY8 1250 aa15.25■□□□□ 0.03
CDCA3-210ENST00000545368 CNKSR2Q8WXI2 1034 aa15.25■□□□□ 0.03
CDCA3-210ENST00000545368 CCDC102AQ96A19 550 aa15.25■□□□□ 0.03
CDCA3-210ENST00000545368 KIF2CQ99661 725 aa15.25■□□□□ 0.03
CDCA3-210ENST00000545368 TMX2Q9Y320 296 aa15.25■□□□□ 0.03
CDCA3-210ENST00000545368 AFG3L2Q9Y4W6 797 aa15.25■□□□□ 0.03
CDCA3-210ENST00000545368 PTPRFP10586 1907 aa15.24■□□□□ 0.03
CDCA3-210ENST00000545368 CCDC69A6NI79 296 aa15.24■□□□□ 0.03
CDCA3-210ENST00000545368 C19orf81C9J6K1 198 aa15.24■□□□□ 0.03
CDCA3-210ENST00000545368 CXCL11O14625 94 aa15.24■□□□□ 0.03
CDCA3-210ENST00000545368 SLC10A3P09131 477 aa15.24■□□□□ 0.03
CDCA3-210ENST00000545368 LIFRP42702 1097 aa15.24■□□□□ 0.03
CDCA3-210ENST00000545368 ECE1P42892 770 aa15.24■□□□□ 0.03
CDCA3-210ENST00000545368 C1QTNF8P60827 252 aa15.24■□□□□ 0.03
CDCA3-210ENST00000545368 MTMR2Q13614 643 aa15.24■□□□□ 0.03
CDCA3-210ENST00000545368 ANKRD1Q15327 319 aa15.24■□□□□ 0.03
CDCA3-210ENST00000545368 SPRYD7Q5W111 196 aa15.24■□□□□ 0.03
CDCA3-210ENST00000545368 LRRC47Q8N1G4 583 aaKnown RBP15.24■□□□□ 0.03
CDCA3-210ENST00000545368 ACER1Q8TDN7 264 aa15.24■□□□□ 0.03
CDCA3-210ENST00000545368 ANKS1AQ92625 1134 aa15.24■□□□□ 0.03
CDCA3-210ENST00000545368 MKL1Q969V6 931 aa15.24■□□□□ 0.03
CDCA3-210ENST00000545368 TMEM47Q9BQJ4 181 aa15.24■□□□□ 0.03
CDCA3-210ENST00000545368 KIAA1683Q9H0B3 1180 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms