RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 SOWAHDA6NJG2 315 aa9.83□□□□□ -0.84
CCDC7-210ENST00000545067 MYO1BO43795 1136 aa9.83□□□□□ -0.84
CCDC7-210ENST00000545067 IL6STP40189 918 aaPredicted RBP9.83□□□□□ -0.84
CCDC7-210ENST00000545067 INF2Q27J81 1249 aa9.83□□□□□ -0.84
CCDC7-210ENST00000545067 E4F1Q66K89 784 aaPredicted RBP9.83□□□□□ -0.84
CCDC7-210ENST00000545067 METTL16Q86W50 562 aaKnown RBP9.83□□□□□ -0.84
CCDC7-210ENST00000545067 DYNLL2Q96FJ2 89 aa9.83□□□□□ -0.84
CCDC7-210ENST00000545067 EPB41L4AQ9HCS5 686 aaPredicted RBP9.83□□□□□ -0.84
CCDC7-210ENST00000545067 MACROD2A1Z1Q3 448 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 GOLGA6L9A6NEM1 432 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 PPP6R2O75170 966 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 CASP14P31944 242 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 RAD51AP2Q09MP3 1159 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 SPA17Q15506 151 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 PLEKHA4Q9H4M7 779 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 RGPD8O14715 1765 aaPredicted RBP9.82□□□□□ -0.84
CCDC7-210ENST00000545067 NRXN3Q9Y4C0 1643 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 CTAGE9A4FU28 777 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 PSMA7O14818 248 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 PRDX5P30044 214 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 TXKP42681 527 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 TNNI2P48788 182 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 MTF1Q14872 753 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 KMT5BQ4FZB7 885 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 CCDC148Q8NFR7 591 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 IGDCC4Q8TDY8 1250 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 EXOC1Q9NV70 894 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 SRP68Q9UHB9 627 aaKnown RBP9.82□□□□□ -0.84
CCDC7-210ENST00000545067 MON2Q7Z3U7 1717 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 TEX33O43247 280 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 USP17L8P0C7I0 530 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 DIXDC1Q155Q3 683 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 LEKR1Q6ZMV7 388 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 DYMQ7RTS9 669 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 GOLGA1Q92805 767 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 CTAGE1Q96RT6 745 aa9.82□□□□□ -0.84
CCDC7-210ENST00000545067 AKR1B10O60218 316 aa9.81□□□□□ -0.84
CCDC7-210ENST00000545067 NELFBQ8WX92 580 aa9.81□□□□□ -0.84
CCDC7-210ENST00000545067 LUC7L2Q9Y383 392 aaKnown RBP9.81□□□□□ -0.84
CCDC7-210ENST00000545067 CTAGE15A4D2H0 777 aa9.81□□□□□ -0.84
CCDC7-210ENST00000545067 CTAGE8P0CG41 777 aa9.81□□□□□ -0.84
CCDC7-210ENST00000545067 CALM1P0DP23 149 aa9.81□□□□□ -0.84
CCDC7-210ENST00000545067 CALM2P0DP24 149 aa9.81□□□□□ -0.84
CCDC7-210ENST00000545067 CALM3P0DP25 149 aa9.81□□□□□ -0.84
CCDC7-210ENST00000545067 LIFRP42702 1097 aa9.81□□□□□ -0.84
CCDC7-210ENST00000545067 TOGARAM2Q6ZUX3 1019 aa9.81□□□□□ -0.84
CCDC7-210ENST00000545067 CTAGE6Q86UF2 777 aa9.81□□□□□ -0.84
CCDC7-210ENST00000545067 CTAGE4Q8IX94 777 aa9.81□□□□□ -0.84
CCDC7-210ENST00000545067 CELF1Q92879 486 aaKnown RBP9.81□□□□□ -0.84
CCDC7-210ENST00000545067 AK7Q96M32 723 aa9.81□□□□□ -0.84
CCDC7-210ENST00000545067 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.81□□□□□ -0.84
CCDC7-210ENST00000545067 GPCPD1Q9NPB8 672 aa9.81□□□□□ -0.84
CCDC7-210ENST00000545067 CCNT1O60563 726 aaKnown RBP9.81□□□□□ -0.84
CCDC7-210ENST00000545067 BMP15O95972 392 aa9.81□□□□□ -0.84
CCDC7-210ENST00000545067 FMR1Q06787 632 aaKnown RBP eCLIP9.81□□□□□ -0.84
CCDC7-210ENST00000545067 RBL2Q08999 1139 aa9.81□□□□□ -0.84
CCDC7-210ENST00000545067 PAK1Q13153 545 aa9.81□□□□□ -0.84
CCDC7-210ENST00000545067 RESP18Q5W5W9 173 aa9.81□□□□□ -0.84
CCDC7-210ENST00000545067 SPTY2D1Q68D10 685 aaPredicted RBP9.81□□□□□ -0.84
CCDC7-210ENST00000545067 VSTM4Q8IW00 320 aa9.81□□□□□ -0.84
CCDC7-210ENST00000545067 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.81□□□□□ -0.84
CCDC7-210ENST00000545067 GTPBP4Q9BZE4 634 aaKnown RBP9.81□□□□□ -0.84
CCDC7-210ENST00000545067 ACBD3Q9H3P7 528 aa9.81□□□□□ -0.84
CCDC7-210ENST00000545067 IKBKBO14920 756 aa9.8□□□□□ -0.84
CCDC7-210ENST00000545067 EIF3JO75822 258 aaKnown RBP9.8□□□□□ -0.84
CCDC7-210ENST00000545067 CHMP4BP1P59074 171 aa9.8□□□□□ -0.84
CCDC7-210ENST00000545067 TBC1D8BQ0IIM8 1120 aa9.8□□□□□ -0.84
CCDC7-210ENST00000545067 CCDC122Q5T0U0 273 aa9.8□□□□□ -0.84
CCDC7-210ENST00000545067 PNMA1Q8ND90 353 aa9.8□□□□□ -0.84
CCDC7-210ENST00000545067 ACRBPQ8NEB7 543 aa9.8□□□□□ -0.84
CCDC7-210ENST00000545067 CALML4Q96GE6 196 aa9.8□□□□□ -0.84
CCDC7-210ENST00000545067 SRRTQ9BXP5 876 aaKnown RBP9.8□□□□□ -0.84
CCDC7-210ENST00000545067 RABEP2Q9H5N1 569 aa9.8□□□□□ -0.84
CCDC7-210ENST00000545067 ENC1O14682 589 aa9.8□□□□□ -0.84
CCDC7-210ENST00000545067 CSF1RP07333 972 aa9.8□□□□□ -0.84
CCDC7-210ENST00000545067 CALML3P27482 149 aa9.8□□□□□ -0.84
CCDC7-210ENST00000545067 ARID4AP29374 1257 aaPredicted RBP9.8□□□□□ -0.84
CCDC7-210ENST00000545067 PDE4DQ08499 809 aa9.8□□□□□ -0.84
CCDC7-210ENST00000545067 TNS3Q68CZ2 1445 aa9.8□□□□□ -0.84
CCDC7-210ENST00000545067 WWC2Q6AWC2 1192 aa9.8□□□□□ -0.84
CCDC7-210ENST00000545067 ENAHQ8N8S7 591 aaPredicted RBP9.8□□□□□ -0.84
CCDC7-210ENST00000545067 VPS18Q9P253 973 aa9.8□□□□□ -0.84
CCDC7-210ENST00000545067 RTCBQ9Y3I0 505 aaKnown RBP9.8□□□□□ -0.84
CCDC7-210ENST00000545067 USP17L3A6NCW0 530 aa9.8□□□□□ -0.84
CCDC7-210ENST00000545067 USP17L4A6NCW7 530 aa9.8□□□□□ -0.84
CCDC7-210ENST00000545067 RNASE9P60153 205 aaKnown RBP9.8□□□□□ -0.84
CCDC7-210ENST00000545067 USP17L1Q7RTZ2 530 aa9.8□□□□□ -0.84
CCDC7-210ENST00000545067 CSGALNACT2Q8N6G5 542 aa9.8□□□□□ -0.84
CCDC7-210ENST00000545067 SLC44A5Q8NCS7 719 aa9.8□□□□□ -0.84
CCDC7-210ENST00000545067 CRACR2AQ9BSW2 395 aa9.8□□□□□ -0.84
CCDC7-210ENST00000545067 FOXP1Q9H334 677 aaPredicted RBP9.8□□□□□ -0.84
CCDC7-210ENST00000545067 BMP2KQ9NSY1 1161 aaPredicted RBP9.8□□□□□ -0.84
CCDC7-210ENST00000545067 RBM28Q9NW13 759 aaKnown RBP9.8□□□□□ -0.84
CCDC7-210ENST00000545067 TBC1D7Q9P0N9 293 aa9.8□□□□□ -0.84
CCDC7-210ENST00000545067 PSDA5PKW4 1024 aaPredicted RBP9.79□□□□□ -0.84
CCDC7-210ENST00000545067 SCG2P13521 617 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 PTPREP23469 700 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 CLCN6P51797 869 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 GYS2P54840 703 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 TRIM28Q13263 835 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms