RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 CPA4Q9UI42 421 aa11.37□□□□□ -0.59
CIT-216ENST00000544872 HERC5Q9UII4 1024 aaKnown RBP11.37□□□□□ -0.59
CIT-216ENST00000544872 SLC4A4Q9Y6R1 1079 aa11.37□□□□□ -0.59
CIT-216ENST00000544872 ELNP15502 786 aa11.36□□□□□ -0.59
CIT-216ENST00000544872 CTGFP29279 349 aa11.36□□□□□ -0.59
CIT-216ENST00000544872 RHBDL3P58872 404 aa11.36□□□□□ -0.59
CIT-216ENST00000544872 NFIAQ12857 509 aa11.36□□□□□ -0.59
CIT-216ENST00000544872 MCMDC2Q4G0Z9 681 aa11.36□□□□□ -0.59
CIT-216ENST00000544872 GIMAP6Q6P9H5 292 aa11.36□□□□□ -0.59
CIT-216ENST00000544872 MCM9Q9NXL9 1143 aa11.36□□□□□ -0.59
CIT-216ENST00000544872 ADGRA2Q96PE1 1338 aa11.35□□□□□ -0.59
CIT-216ENST00000544872 PKD1L2Q7Z442 2459 aa11.35□□□□□ -0.59
CIT-216ENST00000544872 CACNA1BQ00975 2339 aa11.35□□□□□ -0.59
CIT-216ENST00000544872 PATL2C9JE40 543 aaKnown RBP11.35□□□□□ -0.59
CIT-216ENST00000544872 EIF5BO60841 1220 aaKnown RBP11.35□□□□□ -0.59
CIT-216ENST00000544872 TDO2P48775 406 aa11.35□□□□□ -0.59
CIT-216ENST00000544872 FCGRTP55899 365 aa11.35□□□□□ -0.59
CIT-216ENST00000544872 DYNLL1P63167 89 aaKnown RBP11.35□□□□□ -0.59
CIT-216ENST00000544872 NHLH1Q02575 133 aa11.35□□□□□ -0.59
CIT-216ENST00000544872 TTC22Q5TAA0 569 aa11.35□□□□□ -0.59
CIT-216ENST00000544872 KIAA1211Q6ZU35 1233 aa11.35□□□□□ -0.59
CIT-216ENST00000544872 MIGA2Q7L4E1 593 aa11.35□□□□□ -0.59
CIT-216ENST00000544872 WRNIP1Q96S55 665 aa11.35□□□□□ -0.59
CIT-216ENST00000544872 ARMT1Q9H993 441 aa11.35□□□□□ -0.59
CIT-216ENST00000544872 PAK6Q9NQU5 681 aaPredicted RBP11.35□□□□□ -0.59
CIT-216ENST00000544872 FAM198AQ9UFP1 575 aa11.35□□□□□ -0.59
CIT-216ENST00000544872 SSC5DA1L4H1 1573 aa11.35□□□□□ -0.59
CIT-216ENST00000544872 SCN9AQ15858 1988 aa11.35□□□□□ -0.59
CIT-216ENST00000544872 SALL3Q9BXA9 1300 aa11.35□□□□□ -0.59
CIT-216ENST00000544872 RPAP1Q9BWH6 1393 aaPredicted RBP11.34□□□□□ -0.59
CIT-216ENST00000544872 TCRBV5S4A2TA0A5A2 114 aa11.34□□□□□ -0.59
CIT-216ENST00000544872 SMIM22K7EJ46 135 aa11.34□□□□□ -0.59
CIT-216ENST00000544872 TBC1D12O60347 775 aa11.34□□□□□ -0.59
CIT-216ENST00000544872 GPR37L1O60883 481 aa11.34□□□□□ -0.59
CIT-216ENST00000544872 SDSP20132 328 aa11.34□□□□□ -0.59
CIT-216ENST00000544872 SMAD3P84022 425 aaKnown RBP11.34□□□□□ -0.59
CIT-216ENST00000544872 ADGRA1Q86SQ6 560 aa11.34□□□□□ -0.59
CIT-216ENST00000544872 ZNF384Q8TF68 577 aa11.34□□□□□ -0.59
CIT-216ENST00000544872 UIMC1Q96RL1 719 aa11.34□□□□□ -0.59
CIT-216ENST00000544872 GAS2L1Q99501 681 aaPredicted RBP11.34□□□□□ -0.59
CIT-216ENST00000544872 RIOK1Q9BRS2 568 aaKnown RBP11.34□□□□□ -0.59
CIT-216ENST00000544872 NAPBQ9H115 298 aa11.34□□□□□ -0.59
CIT-216ENST00000544872 CABP5Q9NP86 173 aa11.34□□□□□ -0.59
CIT-216ENST00000544872 GINM1Q9NU53 330 aa11.34□□□□□ -0.59
CIT-216ENST00000544872 SAP30BPQ9UHR5 308 aaKnown RBP11.34□□□□□ -0.59
CIT-216ENST00000544872 TCF20Q9UGU0 1960 aaKnown RBP11.34□□□□□ -0.59
CIT-216ENST00000544872 FLT1P17948 1338 aa11.34□□□□□ -0.59
CIT-216ENST00000544872 RFX7Q2KHR2 1363 aa11.33□□□□□ -0.6
CIT-216ENST00000544872 GPAA1O43292 621 aa11.33□□□□□ -0.6
CIT-216ENST00000544872 CTNND1O60716 968 aaKnown RBP11.33□□□□□ -0.6
CIT-216ENST00000544872 USP2O75604 605 aaPredicted RBP11.33□□□□□ -0.6
CIT-216ENST00000544872 GRIN2CQ14957 1233 aa11.33□□□□□ -0.6
CIT-216ENST00000544872 CCDC85BQ15834 202 aaPredicted RBP11.33□□□□□ -0.6
CIT-216ENST00000544872 ZMYM1Q5SVZ6 1142 aa11.33□□□□□ -0.6
CIT-216ENST00000544872 LCORLQ8N3X6 602 aa11.33□□□□□ -0.6
CIT-216ENST00000544872 TEPSINQ96N21 525 aa11.33□□□□□ -0.6
CIT-216ENST00000544872 STRBPQ96SI9 672 aaKnown RBP11.33□□□□□ -0.6
CIT-216ENST00000544872 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.33□□□□□ -0.6
CIT-216ENST00000544872 PUS7LQ9H0K6 701 aaKnown RBP11.33□□□□□ -0.6
CIT-216ENST00000544872 MKNK2Q9HBH9 465 aa11.33□□□□□ -0.6
CIT-216ENST00000544872 ARPP21Q9UBL0 812 aaPredicted RBP11.33□□□□□ -0.6
CIT-216ENST00000544872 PRKAG2Q9UGJ0 569 aa11.33□□□□□ -0.6
CIT-216ENST00000544872 SWAP70Q9UH65 585 aa11.33□□□□□ -0.6
CIT-216ENST00000544872 CTNNA3Q9UI47 895 aa11.33□□□□□ -0.6
CIT-216ENST00000544872 SERPINB13Q9UIV8 391 aa11.33□□□□□ -0.6
CIT-216ENST00000544872 PALD1Q9ULE6 856 aa11.33□□□□□ -0.6
CIT-216ENST00000544872 GABRQQ9UN88 632 aa11.33□□□□□ -0.6
CIT-216ENST00000544872 LAMB1P07942 1786 aa11.33□□□□□ -0.6
CIT-216ENST00000544872 CDH23Q9H251 3354 aa11.32□□□□□ -0.6
CIT-216ENST00000544872 BTBD19C9JJ37 291 aa11.32□□□□□ -0.6
CIT-216ENST00000544872 CETPP11597 493 aa11.32□□□□□ -0.6
CIT-216ENST00000544872 SHHQ15465 462 aa11.32□□□□□ -0.6
CIT-216ENST00000544872 POTEEQ6S8J3 1075 aa11.32□□□□□ -0.6
CIT-216ENST00000544872 CWC27Q6UX04 472 aaKnown RBP11.32□□□□□ -0.6
CIT-216ENST00000544872 C17orf99Q6UX52 265 aa11.32□□□□□ -0.6
CIT-216ENST00000544872 OSBP2Q969R2 916 aa11.32□□□□□ -0.6
CIT-216ENST00000544872 TBC1D2Q9BYX2 928 aa11.32□□□□□ -0.6
CIT-216ENST00000544872 TSPYL2Q9H2G4 693 aaPredicted RBP11.32□□□□□ -0.6
CIT-216ENST00000544872 AS3MTQ9HBK9 375 aa11.32□□□□□ -0.6
CIT-216ENST00000544872 DCP1AQ9NPI6 582 aaPredicted RBP11.32□□□□□ -0.6
CIT-216ENST00000544872 DDX4Q9NQI0 724 aaKnown RBP11.32□□□□□ -0.6
CIT-216ENST00000544872 DDTLA6NHG4 134 aaPredicted RBP11.31□□□□□ -0.6
CIT-216ENST00000544872 MINDY4BA8MYZ0 360 aa11.31□□□□□ -0.6
CIT-216ENST00000544872 ST18O60284 1047 aa11.31□□□□□ -0.6
CIT-216ENST00000544872 PDE4AP27815 886 aa11.31□□□□□ -0.6
CIT-216ENST00000544872 PDE4BQ07343 736 aa11.31□□□□□ -0.6
CIT-216ENST00000544872 BMP2KLQ5H9B9 411 aa11.31□□□□□ -0.6
CIT-216ENST00000544872 PPP4R3BQ5MIZ7 849 aa11.31□□□□□ -0.6
CIT-216ENST00000544872 ERO1BQ86YB8 467 aa11.31□□□□□ -0.6
CIT-216ENST00000544872 ZFPM1Q8IX07 1006 aa11.31□□□□□ -0.6
CIT-216ENST00000544872 ZNF444Q8N0Y2 327 aaPredicted RBP11.31□□□□□ -0.6
CIT-216ENST00000544872 SDR42E1Q8WUS8 393 aa11.31□□□□□ -0.6
CIT-216ENST00000544872 EHD4Q9H223 541 aa11.31□□□□□ -0.6
CIT-216ENST00000544872 ATRNL1Q5VV63 1379 aa11.3□□□□□ -0.6
CIT-216ENST00000544872 USP17L12C9JPN9 530 aa11.3□□□□□ -0.6
CIT-216ENST00000544872 USP17L21D6R901 530 aa11.3□□□□□ -0.6
CIT-216ENST00000544872 MPHOSPH10O00566 681 aaKnown RBP11.3□□□□□ -0.6
CIT-216ENST00000544872 ASNSP08243 561 aa11.3□□□□□ -0.6
CIT-216ENST00000544872 FLT3LGP49771 235 aa11.3□□□□□ -0.6
CIT-216ENST00000544872 PPATQ06203 517 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms