RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 TTLL5Q6EMB2 1281 aa5.3□□□□□ -1.56
SNHG1-220ENST00000544550 Q7L0L9 218 aa5.3□□□□□ -1.56
SNHG1-220ENST00000544550 ANKRD18AQ8IVF6 992 aa5.3□□□□□ -1.56
SNHG1-220ENST00000544550 TDHQ8IZJ6 230 aa5.3□□□□□ -1.56
SNHG1-220ENST00000544550 PLBD2Q8NHP8 589 aa5.3□□□□□ -1.56
SNHG1-220ENST00000544550 ZBED3Q96IU2 234 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-220ENST00000544550 ZNF594Q96JF6 807 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-220ENST00000544550 GDF15Q99988 308 aa5.3□□□□□ -1.56
SNHG1-220ENST00000544550 ISCA1Q9BUE6 129 aa5.3□□□□□ -1.56
SNHG1-220ENST00000544550 BABAM1Q9NWV8 329 aa5.3□□□□□ -1.56
SNHG1-220ENST00000544550 BIN2Q9UBW5 565 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-220ENST00000544550 SRRDQ9UH36 339 aa5.3□□□□□ -1.56
SNHG1-220ENST00000544550 TSPYL4Q9UJ04 414 aa5.3□□□□□ -1.56
SNHG1-220ENST00000544550 FZD1Q9UP38 647 aa5.3□□□□□ -1.56
SNHG1-220ENST00000544550 RIPOR2Q9Y4F9 1068 aa5.3□□□□□ -1.56
SNHG1-220ENST00000544550 FAM205AQ6ZU69 1335 aa5.29□□□□□ -1.56
SNHG1-220ENST00000544550 MYPNQ86TC9 1320 aa5.29□□□□□ -1.56
SNHG1-220ENST00000544550 CETPP11597 493 aa5.29□□□□□ -1.56
SNHG1-220ENST00000544550 SCTRP47872 440 aa5.29□□□□□ -1.56
SNHG1-220ENST00000544550 KCNMA1Q12791 1236 aa5.29□□□□□ -1.56
SNHG1-220ENST00000544550 TRIM28Q13263 835 aaKnown RBP5.29□□□□□ -1.56
SNHG1-220ENST00000544550 SWI5Q1ZZU3 235 aa5.29□□□□□ -1.56
SNHG1-220ENST00000544550 PROSER3Q2NL68 480 aa5.29□□□□□ -1.56
SNHG1-220ENST00000544550 CCDC102BQ68D86 513 aa5.29□□□□□ -1.56
SNHG1-220ENST00000544550 FAM109BQ6ICB4 259 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-220ENST00000544550 NECAB2Q7Z6G3 386 aa5.29□□□□□ -1.56
SNHG1-220ENST00000544550 KIAA0825Q8IV33 1275 aa5.29□□□□□ -1.56
SNHG1-220ENST00000544550 ZBTB38Q8NAP3 1195 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-220ENST00000544550 BRI3BPQ8WY22 251 aa5.29□□□□□ -1.56
SNHG1-220ENST00000544550 CDC5LQ99459 802 aaKnown RBP5.29□□□□□ -1.56
SNHG1-220ENST00000544550 ARHGAP39Q9C0H5 1083 aa5.29□□□□□ -1.56
SNHG1-220ENST00000544550 PNNQ9H307 717 aaKnown RBP5.29□□□□□ -1.56
SNHG1-220ENST00000544550 ELP3Q9H9T3 547 aa5.29□□□□□ -1.56
SNHG1-220ENST00000544550 TMPRSS4Q9NRS4 437 aa5.29□□□□□ -1.56
SNHG1-220ENST00000544550 CSADQ9Y600 493 aa5.29□□□□□ -1.56
SNHG1-220ENST00000544550 SSC5DA1L4H1 1573 aa5.29□□□□□ -1.56
SNHG1-220ENST00000544550 MKI67P46013 3256 aaKnown RBP5.28□□□□□ -1.56
SNHG1-220ENST00000544550 SZT2Q5T011 3432 aa5.28□□□□□ -1.56
SNHG1-220ENST00000544550 TTC24A2A3L6 582 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-220ENST00000544550 PATL2C9JE40 543 aaKnown RBP5.28□□□□□ -1.56
SNHG1-220ENST00000544550 PDE8AO60658 829 aa5.28□□□□□ -1.56
SNHG1-220ENST00000544550 USP2O75604 605 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-220ENST00000544550 TFRCP02786 760 aaKnown RBP5.28□□□□□ -1.56
SNHG1-220ENST00000544550 ANXA1P04083 346 aa5.28□□□□□ -1.56
SNHG1-220ENST00000544550 SNRPBP14678 240 aaKnown RBP5.28□□□□□ -1.56
SNHG1-220ENST00000544550 PLA2G5P39877 138 aa5.28□□□□□ -1.56
SNHG1-220ENST00000544550 PSMC4P43686 418 aa5.28□□□□□ -1.56
SNHG1-220ENST00000544550 SEC13P55735 322 aa5.28□□□□□ -1.56
SNHG1-220ENST00000544550 FCGRTP55899 365 aa5.28□□□□□ -1.56
SNHG1-220ENST00000544550 KCNA1Q09470 495 aa5.28□□□□□ -1.56
SNHG1-220ENST00000544550 SNAPC2Q13487 334 aa5.28□□□□□ -1.56
SNHG1-220ENST00000544550 LCE2CQ5TA81 110 aa5.28□□□□□ -1.56
SNHG1-220ENST00000544550 NBPF12Q5TAG4 269 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-220ENST00000544550 C17orf99Q6UX52 265 aa5.28□□□□□ -1.56
SNHG1-220ENST00000544550 CCDC116Q8IYX3 515 aa5.28□□□□□ -1.56
SNHG1-220ENST00000544550 FAM43AQ8N2R8 423 aa5.28□□□□□ -1.56
SNHG1-220ENST00000544550 TPCN2Q8NHX9 752 aa5.28□□□□□ -1.56
SNHG1-220ENST00000544550 CLP1Q92989 425 aaKnown RBP5.28□□□□□ -1.56
SNHG1-220ENST00000544550 FAM122AQ96E09 287 aa5.28□□□□□ -1.56
SNHG1-220ENST00000544550 MXD3Q9BW11 206 aa5.28□□□□□ -1.56
SNHG1-220ENST00000544550 VEZTQ9HBM0 779 aa5.28□□□□□ -1.56
SNHG1-220ENST00000544550 SEC31BQ9NQW1 1179 aa5.28□□□□□ -1.56
SNHG1-220ENST00000544550 BSDC1Q9NW68 430 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-220ENST00000544550 NXF1Q9UBU9 619 aaKnown RBP5.28□□□□□ -1.56
SNHG1-220ENST00000544550 LEMD3Q9Y2U8 911 aa5.28□□□□□ -1.56
SNHG1-220ENST00000544550 LAMB1P07942 1786 aa5.28□□□□□ -1.56
SNHG1-220ENST00000544550 LAMB2P55268 1798 aa5.28□□□□□ -1.56
SNHG1-220ENST00000544550 ZNF646O15015 1829 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-220ENST00000544550 ADGRA2Q96PE1 1338 aa5.27□□□□□ -1.57
SNHG1-220ENST00000544550 CLRN2A0PK11 232 aa5.27□□□□□ -1.57
SNHG1-220ENST00000544550 LILRA1O75019 489 aa5.27□□□□□ -1.57
SNHG1-220ENST00000544550 NR3C2P08235 984 aa5.27□□□□□ -1.57
SNHG1-220ENST00000544550 GMPRP36959 345 aa5.27□□□□□ -1.57
SNHG1-220ENST00000544550 TNNI2P48788 182 aa5.27□□□□□ -1.57
SNHG1-220ENST00000544550 CCT4P50991 539 aaKnown RBP5.27□□□□□ -1.57
SNHG1-220ENST00000544550 FKBP1AP62942 108 aaKnown RBP5.27□□□□□ -1.57
SNHG1-220ENST00000544550 VGLL4Q14135 290 aa5.27□□□□□ -1.57
SNHG1-220ENST00000544550 RASA3Q14644 834 aa5.27□□□□□ -1.57
SNHG1-220ENST00000544550 NFE2L2Q16236 605 aa5.27□□□□□ -1.57
SNHG1-220ENST00000544550 PPP1R26Q5T8A7 1209 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-220ENST00000544550 PHLDB3Q6NSJ2 640 aa5.27□□□□□ -1.57
SNHG1-220ENST00000544550 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-220ENST00000544550 ERO1BQ86YB8 467 aa5.27□□□□□ -1.57
SNHG1-220ENST00000544550 C7orf61Q8IZ16 206 aa5.27□□□□□ -1.57
SNHG1-220ENST00000544550 HOOK2Q96ED9 719 aa5.27□□□□□ -1.57
SNHG1-220ENST00000544550 UBE2OQ9C0C9 1292 aaKnown RBP5.27□□□□□ -1.57
SNHG1-220ENST00000544550 OSBPL3Q9H4L5 887 aa5.27□□□□□ -1.57
SNHG1-220ENST00000544550 MAPK8IP3Q9UPT6 1336 aa5.26□□□□□ -1.57
SNHG1-220ENST00000544550 IRS2Q9Y4H2 1338 aa5.26□□□□□ -1.57
SNHG1-220ENST00000544550 POLR2AP24928 1970 aaKnown RBP5.26□□□□□ -1.57
SNHG1-220ENST00000544550 SCN9AQ15858 1988 aa5.26□□□□□ -1.57
SNHG1-220ENST00000544550 SFI1A8K8P3 1242 aa5.26□□□□□ -1.57
SNHG1-220ENST00000544550 BTBD19C9JJ37 291 aa5.26□□□□□ -1.57
SNHG1-220ENST00000544550 M0R2N6 131 aa5.26□□□□□ -1.57
SNHG1-220ENST00000544550 PCCAP05165 728 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-220ENST00000544550 HOXB7P09629 217 aa5.26□□□□□ -1.57
SNHG1-220ENST00000544550 MAGEA10P43363 369 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-220ENST00000544550 RBM5P52756 815 aaKnown RBP eCLIP5.26□□□□□ -1.57
SNHG1-220ENST00000544550 PRKCZQ05513 592 aa5.26□□□□□ -1.57
SNHG1-220ENST00000544550 LMOD3Q0VAK6 560 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms