RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 NT5C2P49902 561 aa12.61□□□□□ -0.39
NPIPB3-210ENST00000542817 DGKZQ13574 1117 aa12.61□□□□□ -0.39
NPIPB3-210ENST00000542817 KRT32Q14532 448 aa12.61□□□□□ -0.39
NPIPB3-210ENST00000542817 ENAHQ8N8S7 591 aaPredicted RBP12.61□□□□□ -0.39
NPIPB3-210ENST00000542817 MKL1Q969V6 931 aa12.61□□□□□ -0.39
NPIPB3-210ENST00000542817 WDR18Q9BV38 432 aa12.61□□□□□ -0.39
NPIPB3-210ENST00000542817 TRIM34Q9BYJ4 488 aa12.61□□□□□ -0.39
NPIPB3-210ENST00000542817 LRRC2Q9BYS8 371 aa12.61□□□□□ -0.39
NPIPB3-210ENST00000542817 ZNF287Q9HBT7 754 aa12.61□□□□□ -0.39
NPIPB3-210ENST00000542817 CREBZFQ9NS37 354 aa12.61□□□□□ -0.39
NPIPB3-210ENST00000542817 MYH8P13535 1937 aa12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 RASSF10A6NK89 507 aa12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 TSPY2A6NKD2 308 aa12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 USP17L5A8MUK1 530 aa12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 IRF6O14896 467 aa12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 TSPY3P0CV98 308 aa12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 TSPY8P0CW00 308 aa12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 EEF2P13639 858 aaKnown RBP12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 RPS6KB1P23443 525 aa12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 C1QTNF8P60827 252 aa12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 RAB3GAP1Q15042 981 aa12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 DHX32Q7L7V1 743 aaKnown RBP12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 ERO1BQ86YB8 467 aa12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 RASAL3Q86YV0 1011 aa12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 WNK4Q96J92 1243 aa12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 HHIPL1Q96JK4 782 aa12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 MS4A4AQ96JQ5 239 aa12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 TTC14Q96N46 770 aa12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 ZSCAN10Q96SZ4 725 aaPredicted RBP12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 AGXT2Q9BYV1 514 aa12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 UPF3BQ9BZI7 483 aaKnown RBP12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 TOMM22Q9NS69 142 aa12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 NYAP2Q9P242 653 aa12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 KCNH4Q9UQ05 1017 aa12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 ZHX2Q9Y6X8 837 aa12.6□□□□□ -0.39
NPIPB3-210ENST00000542817 MPHOSPH10O00566 681 aaKnown RBP12.59□□□□□ -0.39
NPIPB3-210ENST00000542817 SH2B2O14492 632 aaPredicted RBP12.59□□□□□ -0.39
NPIPB3-210ENST00000542817 PRC1O43663 620 aa12.59□□□□□ -0.39
NPIPB3-210ENST00000542817 CASTP20810 708 aaKnown RBP12.59□□□□□ -0.39
NPIPB3-210ENST00000542817 MCCP23508 829 aa12.59□□□□□ -0.39
NPIPB3-210ENST00000542817 ICA1Q05084 483 aa12.59□□□□□ -0.39
NPIPB3-210ENST00000542817 PPATQ06203 517 aa12.59□□□□□ -0.39
NPIPB3-210ENST00000542817 PPIL2Q13356 520 aa12.59□□□□□ -0.39
NPIPB3-210ENST00000542817 SPRYD7Q5W111 196 aa12.59□□□□□ -0.39
NPIPB3-210ENST00000542817 RUFY3Q7L099 469 aa12.59□□□□□ -0.39
NPIPB3-210ENST00000542817 RASGRP2Q7LDG7 609 aa12.59□□□□□ -0.39
NPIPB3-210ENST00000542817 FBXL16Q8N461 479 aa12.59□□□□□ -0.39
NPIPB3-210ENST00000542817 OPTNQ96CV9 577 aa12.59□□□□□ -0.39
NPIPB3-210ENST00000542817 ZIC5Q96T25 663 aa12.59□□□□□ -0.39
NPIPB3-210ENST00000542817 KANSL2Q9H9L4 492 aa12.59□□□□□ -0.39
NPIPB3-210ENST00000542817 LY9Q9HBG7 655 aa12.59□□□□□ -0.39
NPIPB3-210ENST00000542817 CSADQ9Y600 493 aa12.59□□□□□ -0.39
NPIPB3-210ENST00000542817 TNKSO95271 1327 aa12.58□□□□□ -0.39
NPIPB3-210ENST00000542817 WDR19Q8NEZ3 1342 aa12.58□□□□□ -0.39
NPIPB3-210ENST00000542817 SLC10A3P09131 477 aa12.58□□□□□ -0.4
NPIPB3-210ENST00000542817 MCM5P33992 734 aa12.58□□□□□ -0.4
NPIPB3-210ENST00000542817 TRDNQ13061 729 aa12.58□□□□□ -0.4
NPIPB3-210ENST00000542817 SPP2Q13103 211 aa12.58□□□□□ -0.4
NPIPB3-210ENST00000542817 TOB2Q14106 344 aaPredicted RBP12.58□□□□□ -0.4
NPIPB3-210ENST00000542817 RGMBQ6NW40 437 aa12.58□□□□□ -0.4
NPIPB3-210ENST00000542817 RALYLQ86SE5 291 aaKnown RBP12.58□□□□□ -0.4
NPIPB3-210ENST00000542817 DGKHQ86XP1 1220 aa12.58□□□□□ -0.4
NPIPB3-210ENST00000542817 ZNF280CQ8ND82 737 aa12.58□□□□□ -0.4
NPIPB3-210ENST00000542817 SLC10A4Q96EP9 437 aa12.58□□□□□ -0.4
NPIPB3-210ENST00000542817 OTUD5Q96G74 571 aa12.58□□□□□ -0.4
NPIPB3-210ENST00000542817 TMEM47Q9BQJ4 181 aa12.58□□□□□ -0.4
NPIPB3-210ENST00000542817 MTA3Q9BTC8 594 aa12.58□□□□□ -0.4
NPIPB3-210ENST00000542817 ALDH8A1Q9H2A2 487 aaPredicted RBP12.58□□□□□ -0.4
NPIPB3-210ENST00000542817 CABP5Q9NP86 173 aa12.58□□□□□ -0.4
NPIPB3-210ENST00000542817 PICK1Q9NRD5 415 aa12.58□□□□□ -0.4
NPIPB3-210ENST00000542817 TMX2Q9Y320 296 aa12.58□□□□□ -0.4
NPIPB3-210ENST00000542817 TTLL1O95922 423 aa12.57□□□□□ -0.4
NPIPB3-210ENST00000542817 BACE1P56817 501 aa12.57□□□□□ -0.4
NPIPB3-210ENST00000542817 SH3D19Q5HYK7 790 aa12.57□□□□□ -0.4
NPIPB3-210ENST00000542817 BLOC1S2Q6QNY1 142 aa12.57□□□□□ -0.4
NPIPB3-210ENST00000542817 SGMS1Q86VZ5 419 aa12.57□□□□□ -0.4
NPIPB3-210ENST00000542817 KIAA1683Q9H0B3 1180 aa12.57□□□□□ -0.4
NPIPB3-210ENST00000542817 EMILIN3Q9NT22 766 aa12.57□□□□□ -0.4
NPIPB3-210ENST00000542817 CLIP2Q9UDT6 1046 aa12.57□□□□□ -0.4
NPIPB3-210ENST00000542817 ABT1Q9ULW3 272 aaKnown RBP12.57□□□□□ -0.4
NPIPB3-210ENST00000542817 PTPRFP10586 1907 aa12.56□□□□□ -0.4
NPIPB3-210ENST00000542817 A0A0G2JLL6 359 aaPredicted RBP12.56□□□□□ -0.4
NPIPB3-210ENST00000542817 TRIM75PA6NK02 468 aa12.56□□□□□ -0.4
NPIPB3-210ENST00000542817 CD2BP2O95400 341 aaKnown RBP12.56□□□□□ -0.4
NPIPB3-210ENST00000542817 HMGB1P09429 215 aaKnown RBP12.56□□□□□ -0.4
NPIPB3-210ENST00000542817 SNHG28P0DPA3 235 aa12.56□□□□□ -0.4
NPIPB3-210ENST00000542817 PSMA5P28066 241 aa12.56□□□□□ -0.4
NPIPB3-210ENST00000542817 LIFRP42702 1097 aa12.56□□□□□ -0.4
NPIPB3-210ENST00000542817 ZNF157P51786 506 aaPredicted RBP12.56□□□□□ -0.4
NPIPB3-210ENST00000542817 EVCP57679 992 aa12.56□□□□□ -0.4
NPIPB3-210ENST00000542817 MKRN3Q13064 507 aaKnown RBP12.56□□□□□ -0.4
NPIPB3-210ENST00000542817 MTMR2Q13614 643 aa12.56□□□□□ -0.4
NPIPB3-210ENST00000542817 CYP4F22Q6NT55 531 aa12.56□□□□□ -0.4
NPIPB3-210ENST00000542817 GPAT2Q6NUI2 795 aa12.56□□□□□ -0.4
NPIPB3-210ENST00000542817 Q6ZUG5 572 aa12.56□□□□□ -0.4
NPIPB3-210ENST00000542817 PRRT2Q7Z6L0 340 aaPredicted RBP12.56□□□□□ -0.4
NPIPB3-210ENST00000542817 LRRC47Q8N1G4 583 aaKnown RBP12.56□□□□□ -0.4
NPIPB3-210ENST00000542817 TMEM87BQ96K49 555 aa12.56□□□□□ -0.4
NPIPB3-210ENST00000542817 C12orf42Q96LP6 360 aa12.56□□□□□ -0.4
NPIPB3-210ENST00000542817 PTPN18Q99952 460 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms