RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 FGD1P98174 961 aa27.17■■□□□ 1.94
HOMER3-205ENST00000542541 SHROOM1Q2M3G4 852 aaPredicted RBP27.17■■□□□ 1.94
HOMER3-205ENST00000542541 DGKHQ86XP1 1220 aa27.17■■□□□ 1.94
HOMER3-205ENST00000542541 SLC10A4Q96EP9 437 aa27.17■■□□□ 1.94
HOMER3-205ENST00000542541 CEP95Q96GE4 821 aa27.17■■□□□ 1.94
HOMER3-205ENST00000542541 AS3MTQ9HBK9 375 aa27.17■■□□□ 1.94
HOMER3-205ENST00000542541 SNCAIPQ9Y6H5 919 aa27.17■■□□□ 1.94
HOMER3-205ENST00000542541 MYH8P13535 1937 aa27.17■■□□□ 1.94
HOMER3-205ENST00000542541 CPA1P15085 419 aa27.16■■□□□ 1.94
HOMER3-205ENST00000542541 HUNKP57058 714 aa27.16■■□□□ 1.94
HOMER3-205ENST00000542541 ICA1Q05084 483 aa27.16■■□□□ 1.94
HOMER3-205ENST00000542541 TMTC2Q8N394 836 aa27.16■■□□□ 1.94
HOMER3-205ENST00000542541 NYAP2Q9P242 653 aa27.16■■□□□ 1.94
HOMER3-205ENST00000542541 STX8Q9UNK0 236 aa27.16■■□□□ 1.94
HOMER3-205ENST00000542541 TNKSO95271 1327 aa27.16■■□□□ 1.94
HOMER3-205ENST00000542541 NMT2O60551 498 aa27.16■■□□□ 1.94
HOMER3-205ENST00000542541 TTLL1O95922 423 aa27.16■■□□□ 1.94
HOMER3-205ENST00000542541 NEK4P51957 841 aa27.16■■□□□ 1.94
HOMER3-205ENST00000542541 TMEM67Q5HYA8 995 aa27.16■■□□□ 1.94
HOMER3-205ENST00000542541 ERO1BQ86YB8 467 aa27.16■■□□□ 1.94
HOMER3-205ENST00000542541 PDRG1Q9NUG6 133 aa27.16■■□□□ 1.94
HOMER3-205ENST00000542541 COL9A3Q14050 684 aaPredicted RBP27.15■■□□□ 1.94
HOMER3-205ENST00000542541 SAPCD2Q86UD0 394 aa27.15■■□□□ 1.94
HOMER3-205ENST00000542541 IGDCC4Q8TDY8 1250 aa27.15■■□□□ 1.94
HOMER3-205ENST00000542541 ANKS1AQ92625 1134 aa27.15■■□□□ 1.94
HOMER3-205ENST00000542541 CLMNQ96JQ2 1002 aa27.15■■□□□ 1.94
HOMER3-205ENST00000542541 ELP3Q9H9T3 547 aa27.15■■□□□ 1.94
HOMER3-205ENST00000542541 ARHGEF10LQ9HCE6 1279 aa27.15■■□□□ 1.94
HOMER3-205ENST00000542541 ZHX2Q9Y6X8 837 aa27.15■■□□□ 1.94
HOMER3-205ENST00000542541 WTAPQ15007 396 aa27.14■■□□□ 1.94
HOMER3-205ENST00000542541 ENAHQ8N8S7 591 aaPredicted RBP27.14■■□□□ 1.94
HOMER3-205ENST00000542541 CLIP2Q9UDT6 1046 aa27.14■■□□□ 1.94
HOMER3-205ENST00000542541 TLL2Q9Y6L7 1015 aa27.14■■□□□ 1.94
HOMER3-205ENST00000542541 EEF2P13639 858 aaKnown RBP27.13■■□□□ 1.93
HOMER3-205ENST00000542541 NOVP48745 357 aa27.13■■□□□ 1.93
HOMER3-205ENST00000542541 APLP1P51693 650 aa27.13■■□□□ 1.93
HOMER3-205ENST00000542541 ATP2B2Q01814 1243 aa27.13■■□□□ 1.93
HOMER3-205ENST00000542541 PPATQ06203 517 aa27.13■■□□□ 1.93
HOMER3-205ENST00000542541 FBXL16Q8N461 479 aa27.13■■□□□ 1.93
HOMER3-205ENST00000542541 TCEANC2Q96MN5 208 aa27.13■■□□□ 1.93
HOMER3-205ENST00000542541 WDR18Q9BV38 432 aa27.13■■□□□ 1.93
HOMER3-205ENST00000542541 SH2D4AQ9H788 454 aa27.13■■□□□ 1.93
HOMER3-205ENST00000542541 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.13■■□□□ 1.93
HOMER3-205ENST00000542541 ABT1Q9ULW3 272 aaKnown RBP27.13■■□□□ 1.93
HOMER3-205ENST00000542541 SPDYE5A6NIY4 337 aa27.12■■□□□ 1.93
HOMER3-205ENST00000542541 LIFRP42702 1097 aa27.12■■□□□ 1.93
HOMER3-205ENST00000542541 SEC23AQ15436 765 aa27.12■■□□□ 1.93
HOMER3-205ENST00000542541 IFIT1BQ5T764 474 aaKnown RBP27.12■■□□□ 1.93
HOMER3-205ENST00000542541 Q6ZUG5 572 aa27.12■■□□□ 1.93
HOMER3-205ENST00000542541 LRRC2Q9BYS8 371 aa27.12■■□□□ 1.93
HOMER3-205ENST00000542541 ALDH8A1Q9H2A2 487 aaPredicted RBP27.12■■□□□ 1.93
HOMER3-205ENST00000542541 SYNPO2Q9UMS6 1093 aa27.12■■□□□ 1.93
HOMER3-205ENST00000542541 SH2B2O14492 632 aaPredicted RBP27.12■■□□□ 1.93
HOMER3-205ENST00000542541 TOP1P11387 765 aaKnown RBP27.12■■□□□ 1.93
HOMER3-205ENST00000542541 RCSD1Q6JBY9 416 aa27.12■■□□□ 1.93
HOMER3-205ENST00000542541 ZNF280CQ8ND82 737 aa27.12■■□□□ 1.93
HOMER3-205ENST00000542541 MKL1Q969V6 931 aa27.12■■□□□ 1.93
HOMER3-205ENST00000542541 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.12■■□□□ 1.93
HOMER3-205ENST00000542541 ANKRD1Q15327 319 aa27.11■■□□□ 1.93
HOMER3-205ENST00000542541 CLEC10AQ8IUN9 316 aa27.11■■□□□ 1.93
HOMER3-205ENST00000542541 SIAH1Q8IUQ4 282 aa27.11■■□□□ 1.93
HOMER3-205ENST00000542541 DOCK1Q14185 1865 aa27.1■■□□□ 1.93
HOMER3-205ENST00000542541 ST18O60284 1047 aa27.1■■□□□ 1.93
HOMER3-205ENST00000542541 NFXL1Q6ZNB6 911 aa27.1■■□□□ 1.93
HOMER3-205ENST00000542541 HHIPL1Q96JK4 782 aa27.1■■□□□ 1.93
HOMER3-205ENST00000542541 KAT14Q9H8E8 782 aa27.1■■□□□ 1.93
HOMER3-205ENST00000542541 LY9Q9HBG7 655 aa27.1■■□□□ 1.93
HOMER3-205ENST00000542541 CREBZFQ9NS37 354 aa27.1■■□□□ 1.93
HOMER3-205ENST00000542541 C1QTNF8P60827 252 aa27.09■■□□□ 1.93
HOMER3-205ENST00000542541 SPP2Q13103 211 aa27.09■■□□□ 1.93
HOMER3-205ENST00000542541 CCDC84Q86UT8 332 aaPredicted RBP27.09■■□□□ 1.93
HOMER3-205ENST00000542541 OPTNQ96CV9 577 aa27.09■■□□□ 1.93
HOMER3-205ENST00000542541 OTUD5Q96G74 571 aa27.09■■□□□ 1.93
HOMER3-205ENST00000542541 TMEM47Q9BQJ4 181 aa27.09■■□□□ 1.93
HOMER3-205ENST00000542541 AGXT2Q9BYV1 514 aa27.09■■□□□ 1.93
HOMER3-205ENST00000542541 TMX2Q9Y320 296 aa27.09■■□□□ 1.93
HOMER3-205ENST00000542541 AFG3L2Q9Y4W6 797 aa27.09■■□□□ 1.93
HOMER3-205ENST00000542541 CCDC69A6NI79 296 aa27.08■■□□□ 1.93
HOMER3-205ENST00000542541 USP17L10C9JJH3 530 aa27.08■■□□□ 1.93
HOMER3-205ENST00000542541 PPIL2Q13356 520 aa27.08■■□□□ 1.93
HOMER3-205ENST00000542541 RGMBQ6NW40 437 aa27.08■■□□□ 1.93
HOMER3-205ENST00000542541 FEZ1Q99689 392 aa27.08■■□□□ 1.93
HOMER3-205ENST00000542541 GREB1LQ9C091 1923 aaPredicted RBP27.08■■□□□ 1.93
HOMER3-205ENST00000542541 ZNF157P51786 506 aaPredicted RBP27.08■■□□□ 1.93
HOMER3-205ENST00000542541 SGMS1Q86VZ5 419 aa27.08■■□□□ 1.93
HOMER3-205ENST00000542541 ACER1Q8TDN7 264 aa27.08■■□□□ 1.93
HOMER3-205ENST00000542541 BRF1Q92994 677 aa27.08■■□□□ 1.93
HOMER3-205ENST00000542541 KIAA1683Q9H0B3 1180 aa27.08■■□□□ 1.93
HOMER3-205ENST00000542541 GPHNQ9NQX3 736 aaPredicted RBP27.08■■□□□ 1.93
HOMER3-205ENST00000542541 C19orf81C9J6K1 198 aa27.07■■□□□ 1.92
HOMER3-205ENST00000542541 USP14P54578 494 aa27.07■■□□□ 1.92
HOMER3-205ENST00000542541 SYNE3Q6ZMZ3 975 aa27.07■■□□□ 1.92
HOMER3-205ENST00000542541 GOPCQ9HD26 462 aa27.07■■□□□ 1.92
HOMER3-205ENST00000542541 OTOFQ9HC10 1997 aa27.06■■□□□ 1.92
HOMER3-205ENST00000542541 A0A1W2PRG0 241 aa27.06■■□□□ 1.92
HOMER3-205ENST00000542541 TRIM75PA6NK02 468 aa27.06■■□□□ 1.92
HOMER3-205ENST00000542541 CXCL11O14625 94 aa27.06■■□□□ 1.92
HOMER3-205ENST00000542541 ECE1P42892 770 aa27.06■■□□□ 1.92
HOMER3-205ENST00000542541 BACE1P56817 501 aa27.06■■□□□ 1.92
HOMER3-205ENST00000542541 CATIPQ7Z7H3 387 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms