RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 MAP3K11Q16584 847 aa19.96■□□□□ 0.79
TMEM50B-210ENST00000542230 SLC35G1Q2M3R5 365 aa19.96■□□□□ 0.79
TMEM50B-210ENST00000542230 EARS2Q5JPH6 523 aaKnown RBP19.96■□□□□ 0.79
TMEM50B-210ENST00000542230 CDC42EP5Q6NZY7 148 aa19.96■□□□□ 0.79
TMEM50B-210ENST00000542230 PNMA1Q8ND90 353 aa19.96■□□□□ 0.79
TMEM50B-210ENST00000542230 MAP3K14Q99558 947 aa19.96■□□□□ 0.79
TMEM50B-210ENST00000542230 MYH6P13533 1939 aa19.96■□□□□ 0.79
TMEM50B-210ENST00000542230 CNTNAP5Q8WYK1 1306 aa19.96■□□□□ 0.79
TMEM50B-210ENST00000542230 MYH1P12882 1939 aa19.95■□□□□ 0.78
TMEM50B-210ENST00000542230 LETM1O95202 739 aaPredicted RBP19.95■□□□□ 0.78
TMEM50B-210ENST00000542230 NOSTRINQ8IVI9 506 aa19.95■□□□□ 0.78
TMEM50B-210ENST00000542230 FBXO41Q8TF61 875 aa19.95■□□□□ 0.78
TMEM50B-210ENST00000542230 WASF1Q92558 559 aa19.95■□□□□ 0.78
TMEM50B-210ENST00000542230 CNKSR1Q969H4 720 aa19.95■□□□□ 0.78
TMEM50B-210ENST00000542230 CPVLQ9H3G5 476 aa19.95■□□□□ 0.78
TMEM50B-210ENST00000542230 KAT14Q9H8E8 782 aa19.95■□□□□ 0.78
TMEM50B-210ENST00000542230 BAG6P46379 1132 aa19.95■□□□□ 0.78
TMEM50B-210ENST00000542230 NDUFA8P51970 172 aa19.95■□□□□ 0.78
TMEM50B-210ENST00000542230 PTPAQ15257 358 aa19.95■□□□□ 0.78
TMEM50B-210ENST00000542230 AXDND1Q5T1B0 1012 aaPredicted RBP19.95■□□□□ 0.78
TMEM50B-210ENST00000542230 PODNQ7Z5L7 613 aa19.95■□□□□ 0.78
TMEM50B-210ENST00000542230 CLEC10AQ8IUN9 316 aa19.95■□□□□ 0.78
TMEM50B-210ENST00000542230 CTCFLQ8NI51 663 aaPredicted RBP19.95■□□□□ 0.78
TMEM50B-210ENST00000542230 DDX19AQ9NUU7 478 aaKnown RBP19.95■□□□□ 0.78
TMEM50B-210ENST00000542230 PRPF3O43395 683 aaKnown RBP19.94■□□□□ 0.78
TMEM50B-210ENST00000542230 ATP2B1P20020 1258 aa19.94■□□□□ 0.78
TMEM50B-210ENST00000542230 SF3B2Q13435 895 aaKnown RBP19.94■□□□□ 0.78
TMEM50B-210ENST00000542230 DACT2Q5SW24 774 aa19.94■□□□□ 0.78
TMEM50B-210ENST00000542230 CLIC6Q96NY7 704 aa19.94■□□□□ 0.78
TMEM50B-210ENST00000542230 TMEM47Q9BQJ4 181 aa19.94■□□□□ 0.78
TMEM50B-210ENST00000542230 YEATS4O95619 227 aa19.94■□□□□ 0.78
TMEM50B-210ENST00000542230 GOLGA8HP0CJ92 632 aa19.94■□□□□ 0.78
TMEM50B-210ENST00000542230 SLC39A14Q15043 492 aa19.94■□□□□ 0.78
TMEM50B-210ENST00000542230 ADALQ6DHV7 355 aa19.94■□□□□ 0.78
TMEM50B-210ENST00000542230 DGKHQ86XP1 1220 aa19.94■□□□□ 0.78
TMEM50B-210ENST00000542230 CALM1P0DP23 149 aa19.93■□□□□ 0.78
TMEM50B-210ENST00000542230 CALM2P0DP24 149 aa19.93■□□□□ 0.78
TMEM50B-210ENST00000542230 CALM3P0DP25 149 aa19.93■□□□□ 0.78
TMEM50B-210ENST00000542230 AKAP17AQ02040 695 aaKnown RBP19.93■□□□□ 0.78
TMEM50B-210ENST00000542230 RBM28Q9NW13 759 aaKnown RBP19.93■□□□□ 0.78
TMEM50B-210ENST00000542230 MRVI1Q9Y6F6 885 aa19.93■□□□□ 0.78
TMEM50B-210ENST00000542230 CRKP46108 304 aa19.93■□□□□ 0.78
TMEM50B-210ENST00000542230 PPP2R5BQ15173 497 aa19.93■□□□□ 0.78
TMEM50B-210ENST00000542230 KCNG4Q8TDN1 519 aa19.93■□□□□ 0.78
TMEM50B-210ENST00000542230 SUGT1Q9Y2Z0 365 aa19.93■□□□□ 0.78
TMEM50B-210ENST00000542230 YDJCA8MPS7 323 aa19.92■□□□□ 0.78
TMEM50B-210ENST00000542230 WNT7AO00755 349 aa19.92■□□□□ 0.78
TMEM50B-210ENST00000542230 TYRO3Q06418 890 aa19.92■□□□□ 0.78
TMEM50B-210ENST00000542230 NPY5RQ15761 445 aa19.92■□□□□ 0.78
TMEM50B-210ENST00000542230 TEKT1Q969V4 418 aa19.92■□□□□ 0.78
TMEM50B-210ENST00000542230 CEP95Q96GE4 821 aa19.92■□□□□ 0.78
TMEM50B-210ENST00000542230 CABP5Q9NP86 173 aa19.92■□□□□ 0.78
TMEM50B-210ENST00000542230 MAD2L2Q9UI95 211 aa19.92■□□□□ 0.78
TMEM50B-210ENST00000542230 KCNA3P22001 575 aa19.92■□□□□ 0.78
TMEM50B-210ENST00000542230 FAM160A1Q05DH4 1040 aa19.92■□□□□ 0.78
TMEM50B-210ENST00000542230 RBM43Q6ZSC3 357 aaKnown RBP19.92■□□□□ 0.78
TMEM50B-210ENST00000542230 CERS3Q8IU89 383 aa19.92■□□□□ 0.78
TMEM50B-210ENST00000542230 FMR1NBQ8N0W7 255 aaPredicted RBP19.92■□□□□ 0.78
TMEM50B-210ENST00000542230 MRPS27Q92552 414 aaKnown RBP19.92■□□□□ 0.78
TMEM50B-210ENST00000542230 ANKS1AQ92625 1134 aa19.92■□□□□ 0.78
TMEM50B-210ENST00000542230 PPP1R9BQ96SB3 815 aa19.92■□□□□ 0.78
TMEM50B-210ENST00000542230 PCDHB6Q9Y5E3 794 aa19.92■□□□□ 0.78
TMEM50B-210ENST00000542230 DPEP1P16444 411 aa19.91■□□□□ 0.78
TMEM50B-210ENST00000542230 GRIN1Q05586 938 aa19.91■□□□□ 0.78
TMEM50B-210ENST00000542230 TCP10Q12799 353 aa19.91■□□□□ 0.78
TMEM50B-210ENST00000542230 SAFBQ15424 915 aaKnown RBP eCLIP19.91■□□□□ 0.78
TMEM50B-210ENST00000542230 CCDC73Q6ZRK6 1079 aa19.91■□□□□ 0.78
TMEM50B-210ENST00000542230 RGS22Q8NE09 1264 aa19.91■□□□□ 0.78
TMEM50B-210ENST00000542230 PHF20Q9BVI0 1012 aa19.91■□□□□ 0.78
TMEM50B-210ENST00000542230 CYTH3O43739 400 aa19.91■□□□□ 0.78
TMEM50B-210ENST00000542230 ZBTB7AO95365 584 aa19.91■□□□□ 0.78
TMEM50B-210ENST00000542230 EIF6P56537 245 aaKnown RBP19.91■□□□□ 0.78
TMEM50B-210ENST00000542230 SPECC1Q5M775 1068 aa19.91■□□□□ 0.78
TMEM50B-210ENST00000542230 STRIP1Q5VSL9 837 aa19.91■□□□□ 0.78
TMEM50B-210ENST00000542230 GPKOWQ92917 476 aaPredicted RBP eCLIP19.91■□□□□ 0.78
TMEM50B-210ENST00000542230 TCP11L1Q9NUJ3 509 aa19.91■□□□□ 0.78
TMEM50B-210ENST00000542230 FAM196BA6NMK8 535 aa19.9■□□□□ 0.78
TMEM50B-210ENST00000542230 CCDC192P0DO97 292 aa19.9■□□□□ 0.78
TMEM50B-210ENST00000542230 AKR1B1P15121 316 aa19.9■□□□□ 0.78
TMEM50B-210ENST00000542230 RBM5P52756 815 aaKnown RBP eCLIP19.9■□□□□ 0.78
TMEM50B-210ENST00000542230 GABPAQ06546 454 aa19.9■□□□□ 0.78
TMEM50B-210ENST00000542230 SHROOM1Q2M3G4 852 aaPredicted RBP19.9■□□□□ 0.78
TMEM50B-210ENST00000542230 HHIPL2Q6UWX4 724 aa19.9■□□□□ 0.78
TMEM50B-210ENST00000542230 NEDD1Q8NHV4 660 aa19.9■□□□□ 0.78
TMEM50B-210ENST00000542230 FOXP1Q9H334 677 aaPredicted RBP19.9■□□□□ 0.78
TMEM50B-210ENST00000542230 AP5Z1O43299 807 aa19.9■□□□□ 0.78
TMEM50B-210ENST00000542230 PPIP5K2O43314 1243 aa19.9■□□□□ 0.78
TMEM50B-210ENST00000542230 KIAA2012Q0VF49 1180 aa19.9■□□□□ 0.78
TMEM50B-210ENST00000542230 CCDC173Q0VFZ6 552 aa19.9■□□□□ 0.78
TMEM50B-210ENST00000542230 SHC4Q6S5L8 630 aa19.9■□□□□ 0.78
TMEM50B-210ENST00000542230 USP25Q9UHP3 1055 aa19.9■□□□□ 0.78
TMEM50B-210ENST00000542230 FOCADQ5VW36 1801 aa19.89■□□□□ 0.78
TMEM50B-210ENST00000542230 QSER1Q2KHR3 1735 aa19.89■□□□□ 0.77
TMEM50B-210ENST00000542230 A0A1W2PQ27 194 aa19.89■□□□□ 0.77
TMEM50B-210ENST00000542230 A0A1W2PQ64 194 aa19.89■□□□□ 0.77
TMEM50B-210ENST00000542230 A0A1W2PQD8 194 aa19.89■□□□□ 0.77
TMEM50B-210ENST00000542230 ANO6Q4KMQ2 910 aa19.89■□□□□ 0.77
TMEM50B-210ENST00000542230 TYW1BQ6NUM6 668 aa19.88■□□□□ 0.77
TMEM50B-210ENST00000542230 USP17L2Q6R6M4 530 aa19.88■□□□□ 0.77
TMEM50B-210ENST00000542230 PDLIM2Q96JY6 352 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms