RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 NEURL4Q96JN8 1562 aa8.35□□□□□ -1.07
SUDS3-202ENST00000541280 ADGRB3O60242 1522 aa8.34□□□□□ -1.07
SUDS3-202ENST00000541280 TET3O43151 1660 aa8.34□□□□□ -1.07
SUDS3-202ENST00000541280 PATL2C9JE40 543 aaKnown RBP8.34□□□□□ -1.07
SUDS3-202ENST00000541280 CYP26A1O43174 497 aa8.34□□□□□ -1.07
SUDS3-202ENST00000541280 DYNC1LI2O43237 492 aaPredicted RBP8.34□□□□□ -1.07
SUDS3-202ENST00000541280 ARNTP27540 789 aa8.34□□□□□ -1.07
SUDS3-202ENST00000541280 GSTT1P30711 240 aa8.34□□□□□ -1.07
SUDS3-202ENST00000541280 ZNF252P-AS1Q0IIN9 211 aa8.34□□□□□ -1.07
SUDS3-202ENST00000541280 DUSP27Q5VZP5 1158 aa8.34□□□□□ -1.07
SUDS3-202ENST00000541280 OGFOD3Q6PK18 319 aa8.34□□□□□ -1.07
SUDS3-202ENST00000541280 NFXL1Q6ZNB6 911 aa8.34□□□□□ -1.07
SUDS3-202ENST00000541280 STK35Q8TDR2 534 aa8.34□□□□□ -1.07
SUDS3-202ENST00000541280 NECAB3Q96P71 396 aaPredicted RBP8.34□□□□□ -1.07
SUDS3-202ENST00000541280 EMILIN2Q9BXX0 1053 aa8.34□□□□□ -1.07
SUDS3-202ENST00000541280 ZC3H12CQ9C0D7 883 aaKnown RBP8.34□□□□□ -1.07
SUDS3-202ENST00000541280 DISC1Q9NRI5 854 aa8.34□□□□□ -1.07
SUDS3-202ENST00000541280 CCDC39Q9UFE4 941 aa8.34□□□□□ -1.07
SUDS3-202ENST00000541280 SYNMO15061 1565 aa8.33□□□□□ -1.08
SUDS3-202ENST00000541280 IRAK1P51617 712 aa8.33□□□□□ -1.08
SUDS3-202ENST00000541280 ZNF765Q7L2R6 523 aa8.33□□□□□ -1.08
SUDS3-202ENST00000541280 VSIG10LQ86VR7 867 aa8.33□□□□□ -1.08
SUDS3-202ENST00000541280 OSBPL7Q9BZF2 842 aa8.33□□□□□ -1.08
SUDS3-202ENST00000541280 C19orf44Q9H6X5 657 aa8.33□□□□□ -1.08
SUDS3-202ENST00000541280 BSDC1Q9NW68 430 aaPredicted RBP8.33□□□□□ -1.08
SUDS3-202ENST00000541280 AKAP2Q9Y2D5 859 aa8.33□□□□□ -1.08
SUDS3-202ENST00000541280 DAGLAQ9Y4D2 1042 aa8.33□□□□□ -1.08
SUDS3-202ENST00000541280 KDM5AP29375 1690 aaKnown RBP8.33□□□□□ -1.08
SUDS3-202ENST00000541280 LRRC7Q96NW7 1537 aa8.33□□□□□ -1.08
SUDS3-202ENST00000541280 TMEM94Q12767 1356 aa8.33□□□□□ -1.08
SUDS3-202ENST00000541280 IQGAP3Q86VI3 1631 aa8.32□□□□□ -1.08
SUDS3-202ENST00000541280 CEP152O94986 1710 aa8.32□□□□□ -1.08
SUDS3-202ENST00000541280 MAPK8P45983 427 aa8.32□□□□□ -1.08
SUDS3-202ENST00000541280 MSH6P52701 1360 aa8.32□□□□□ -1.08
SUDS3-202ENST00000541280 KRTAP9-6A0A140TA67 174 aa8.31□□□□□ -1.08
SUDS3-202ENST00000541280 ATF3P18847 181 aa8.31□□□□□ -1.08
SUDS3-202ENST00000541280 HSPA1LP34931 641 aa8.31□□□□□ -1.08
SUDS3-202ENST00000541280 ZC3H12AQ5D1E8 599 aaKnown RBP8.31□□□□□ -1.08
SUDS3-202ENST00000541280 SCARA3Q6AZY7 606 aa8.31□□□□□ -1.08
SUDS3-202ENST00000541280 KCNB2Q92953 911 aa8.31□□□□□ -1.08
SUDS3-202ENST00000541280 CEP44Q9C0F1 390 aa8.31□□□□□ -1.08
SUDS3-202ENST00000541280 PIDD1Q9HB75 910 aa8.31□□□□□ -1.08
SUDS3-202ENST00000541280 ADGRE2Q9UHX3 823 aa8.31□□□□□ -1.08
SUDS3-202ENST00000541280 PIK3C2BO00750 1634 aa8.31□□□□□ -1.08
SUDS3-202ENST00000541280 ANKRD30BQ9BXX2 1392 aa8.31□□□□□ -1.08
SUDS3-202ENST00000541280 UBR1Q8IWV7 1749 aa8.31□□□□□ -1.08
SUDS3-202ENST00000541280 CCDC144AA2RUR9 1427 aa8.3□□□□□ -1.08
SUDS3-202ENST00000541280 FAM135BQ49AJ0 1406 aa8.3□□□□□ -1.08
SUDS3-202ENST00000541280 ENC1O14682 589 aa8.3□□□□□ -1.08
SUDS3-202ENST00000541280 ERVK-24P63145 666 aa8.3□□□□□ -1.08
SUDS3-202ENST00000541280 SMYD4Q8IYR2 804 aaPredicted RBP8.3□□□□□ -1.08
SUDS3-202ENST00000541280 FBXL18Q96ME1 805 aa8.3□□□□□ -1.08
SUDS3-202ENST00000541280 SETDB2Q96T68 719 aa8.3□□□□□ -1.08
SUDS3-202ENST00000541280 ZC3H7BQ9UGR2 993 aaKnown RBP8.3□□□□□ -1.08
SUDS3-202ENST00000541280 ANGEL1Q9UNK9 670 aaKnown RBP8.3□□□□□ -1.08
SUDS3-202ENST00000541280 NKTRP30414 1462 aaKnown RBP8.3□□□□□ -1.08
SUDS3-202ENST00000541280 IQGAP1P46940 1657 aa8.3□□□□□ -1.08
SUDS3-202ENST00000541280 ADAMTS13Q76LX8 1427 aa8.29□□□□□ -1.08
SUDS3-202ENST00000541280 BMP6P22004 513 aa8.29□□□□□ -1.08
SUDS3-202ENST00000541280 ATP2B2Q01814 1243 aa8.29□□□□□ -1.08
SUDS3-202ENST00000541280 TTLL4Q14679 1199 aa8.29□□□□□ -1.08
SUDS3-202ENST00000541280 RGL3Q3MIN7 710 aa8.29□□□□□ -1.08
SUDS3-202ENST00000541280 FRMD6Q96NE9 622 aa8.29□□□□□ -1.08
SUDS3-202ENST00000541280 KRTAP4-12Q9BQ66 201 aa8.29□□□□□ -1.08
SUDS3-202ENST00000541280 C12orf49Q9H741 205 aa8.29□□□□□ -1.08
SUDS3-202ENST00000541280 WWC3Q9ULE0 1092 aa8.29□□□□□ -1.08
SUDS3-202ENST00000541280 SPG7Q9UQ90 795 aa8.29□□□□□ -1.08
SUDS3-202ENST00000541280 SAMM50Q9Y512 469 aa8.29□□□□□ -1.08
SUDS3-202ENST00000541280 RAB3GAP2Q9H2M9 1393 aa8.29□□□□□ -1.08
SUDS3-202ENST00000541280 TRIM37O94972 964 aa8.28□□□□□ -1.08
SUDS3-202ENST00000541280 NEFMP07197 916 aa8.28□□□□□ -1.08
SUDS3-202ENST00000541280 P4HBP07237 508 aaKnown RBP8.28□□□□□ -1.08
SUDS3-202ENST00000541280 TAL1P17542 331 aaPredicted RBP8.28□□□□□ -1.08
SUDS3-202ENST00000541280 CYP27C1Q4G0S4 372 aa8.28□□□□□ -1.08
SUDS3-202ENST00000541280 MAP1SQ66K74 1059 aaPredicted RBP8.28□□□□□ -1.08
SUDS3-202ENST00000541280 RNF214Q8ND24 703 aa8.28□□□□□ -1.08
SUDS3-202ENST00000541280 GPBAR1Q8TDU6 330 aa8.28□□□□□ -1.08
SUDS3-202ENST00000541280 FMNL2Q96PY5 1086 aa8.28□□□□□ -1.08
SUDS3-202ENST00000541280 FAM8A1Q9UBU6 413 aa8.28□□□□□ -1.08
SUDS3-202ENST00000541280 PCOLCE2Q9UKZ9 415 aa8.28□□□□□ -1.08
SUDS3-202ENST00000541280 TMEM131LA2VDJ0 1609 aa8.28□□□□□ -1.08
SUDS3-202ENST00000541280 TRPM2O94759 1503 aa8.28□□□□□ -1.08
SUDS3-202ENST00000541280 GCC2Q8IWJ2 1684 aa8.27□□□□□ -1.08
SUDS3-202ENST00000541280 COL19A1Q14993 1142 aa8.27□□□□□ -1.09
SUDS3-202ENST00000541280 TPTE2Q6XPS3 522 aa8.27□□□□□ -1.09
SUDS3-202ENST00000541280 CBLL1Q75N03 491 aa8.27□□□□□ -1.09
SUDS3-202ENST00000541280 ABI1Q8IZP0 508 aa8.27□□□□□ -1.09
SUDS3-202ENST00000541280 POLR1AO95602 1720 aaPredicted RBP8.26□□□□□ -1.09
SUDS3-202ENST00000541280 PAX4O43316 350 aa8.26□□□□□ -1.09
SUDS3-202ENST00000541280 PAGE1O75459 146 aa8.26□□□□□ -1.09
SUDS3-202ENST00000541280 RING1Q06587 406 aa8.26□□□□□ -1.09
SUDS3-202ENST00000541280 CDK5R2Q13319 367 aa8.26□□□□□ -1.09
SUDS3-202ENST00000541280 LGR6Q9HBX8 967 aa8.26□□□□□ -1.09
SUDS3-202ENST00000541280 E9PCH4 1651 aa8.26□□□□□ -1.09
SUDS3-202ENST00000541280 DIP2AQ14689 1571 aa8.26□□□□□ -1.09
SUDS3-202ENST00000541280 METP08581 1390 aa8.25□□□□□ -1.09
SUDS3-202ENST00000541280 DISP3Q9P2K9 1392 aa8.25□□□□□ -1.09
SUDS3-202ENST00000541280 FAM87AP0C7U9 286 aa8.25□□□□□ -1.09
SUDS3-202ENST00000541280 NTF4P34130 210 aa8.25□□□□□ -1.09
SUDS3-202ENST00000541280 GRIN3AQ8TCU5 1115 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms