RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 INO80Q9ULG1 1556 aaPredicted RBP15.98■□□□□ 0.15
COLCA1-204ENST00000540738 TBC1D9BQ66K14 1250 aa15.98■□□□□ 0.15
COLCA1-204ENST00000540738 IWS1Q96ST2 819 aa15.98■□□□□ 0.15
COLCA1-204ENST00000540738 DLC1Q96QB1 1528 aa15.98■□□□□ 0.15
COLCA1-204ENST00000540738 SSH2Q76I76 1423 aa15.98■□□□□ 0.15
COLCA1-204ENST00000540738 PLIN2Q99541 437 aa15.97■□□□□ 0.15
COLCA1-204ENST00000540738 MYL10Q9BUA6 226 aa15.97■□□□□ 0.15
COLCA1-204ENST00000540738 CALUO43852 315 aaPredicted RBP15.97■□□□□ 0.15
COLCA1-204ENST00000540738 HSPD1P10809 573 aaKnown RBP15.97■□□□□ 0.15
COLCA1-204ENST00000540738 TMOD1P28289 359 aa15.97■□□□□ 0.15
COLCA1-204ENST00000540738 HLFQ16534 295 aa15.97■□□□□ 0.15
COLCA1-204ENST00000540738 EDC3Q96F86 508 aaKnown RBP15.97■□□□□ 0.15
COLCA1-204ENST00000540738 DACT1Q9NYF0 836 aa15.97■□□□□ 0.15
COLCA1-204ENST00000540738 UBASH3AP57075 661 aa15.97■□□□□ 0.15
COLCA1-204ENST00000540738 FAM160B1Q5W0V3 765 aa15.97■□□□□ 0.15
COLCA1-204ENST00000540738 SOS2Q07890 1332 aaPredicted RBP15.97■□□□□ 0.15
COLCA1-204ENST00000540738 UVSSAQ2YD98 709 aa15.96■□□□□ 0.15
COLCA1-204ENST00000540738 ANO1Q5XXA6 986 aa15.96■□□□□ 0.15
COLCA1-204ENST00000540738 KDM3AQ9Y4C1 1321 aa15.96■□□□□ 0.15
COLCA1-204ENST00000540738 MED23Q9ULK4 1368 aa15.96■□□□□ 0.15
COLCA1-204ENST00000540738 SETBP1Q9Y6X0 1596 aa15.96■□□□□ 0.15
COLCA1-204ENST00000540738 H0YCG3 227 aa15.96■□□□□ 0.15
COLCA1-204ENST00000540738 KLHL40Q2TBA0 621 aa15.96■□□□□ 0.15
COLCA1-204ENST00000540738 RSPH3Q86UC2 560 aa15.96■□□□□ 0.15
COLCA1-204ENST00000540738 ZBTB8OSQ8IWT0 167 aa15.96■□□□□ 0.15
COLCA1-204ENST00000540738 NEK11Q8NG66 645 aa15.96■□□□□ 0.15
COLCA1-204ENST00000540738 COMMD10Q9Y6G5 202 aa15.96■□□□□ 0.15
COLCA1-204ENST00000540738 ECE2O60344 883 aa15.96■□□□□ 0.15
COLCA1-204ENST00000540738 MCM3P25205 808 aa15.96■□□□□ 0.15
COLCA1-204ENST00000540738 DBNLQ9UJU6 430 aaKnown RBP15.96■□□□□ 0.15
COLCA1-204ENST00000540738 ASNSP08243 561 aa15.96■□□□□ 0.15
COLCA1-204ENST00000540738 PTPN14Q15678 1187 aa15.96■□□□□ 0.15
COLCA1-204ENST00000540738 SP8Q8IXZ3 490 aa15.96■□□□□ 0.15
COLCA1-204ENST00000540738 GOLGA1Q92805 767 aa15.96■□□□□ 0.15
COLCA1-204ENST00000540738 USP25Q9UHP3 1055 aa15.96■□□□□ 0.14
COLCA1-204ENST00000540738 CROCC2H7BZ55 1655 aa15.96■□□□□ 0.14
COLCA1-204ENST00000540738 FRMPD2Q68DX3 1309 aaPredicted RBP15.96■□□□□ 0.14
COLCA1-204ENST00000540738 ABCA6Q8N139 1617 aa15.95■□□□□ 0.14
COLCA1-204ENST00000540738 CPA1P15085 419 aa15.95■□□□□ 0.14
COLCA1-204ENST00000540738 NFIXQ14938 502 aa15.95■□□□□ 0.14
COLCA1-204ENST00000540738 SLFN12Q8IYM2 578 aa15.95■□□□□ 0.14
COLCA1-204ENST00000540738 NCOA5Q9HCD5 579 aaKnown RBP15.95■□□□□ 0.14
COLCA1-204ENST00000540738 NRBP2Q9NSY0 501 aa15.95■□□□□ 0.14
COLCA1-204ENST00000540738 TRAF5O00463 557 aa15.95■□□□□ 0.14
COLCA1-204ENST00000540738 PRPF4BQ13523 1007 aaKnown RBP15.95■□□□□ 0.14
COLCA1-204ENST00000540738 KRT40Q6A162 431 aa15.95■□□□□ 0.14
COLCA1-204ENST00000540738 FANCBQ8NB91 859 aa15.95■□□□□ 0.14
COLCA1-204ENST00000540738 DCCP43146 1447 aa15.95■□□□□ 0.14
COLCA1-204ENST00000540738 FRMPD1Q5SYB0 1578 aa15.95■□□□□ 0.14
COLCA1-204ENST00000540738 CASQ1P31415 396 aa15.95■□□□□ 0.14
COLCA1-204ENST00000540738 LMAN1P49257 510 aa15.95■□□□□ 0.14
COLCA1-204ENST00000540738 TAX1BP1Q86VP1 789 aa15.95■□□□□ 0.14
COLCA1-204ENST00000540738 ZNF274Q96GC6 653 aaPredicted RBP15.95■□□□□ 0.14
COLCA1-204ENST00000540738 SSX2IPQ9Y2D8 614 aa15.95■□□□□ 0.14
COLCA1-204ENST00000540738 CUTAO60888 179 aa15.95■□□□□ 0.14
COLCA1-204ENST00000540738 FAM160B2Q86V87 743 aa15.95■□□□□ 0.14
COLCA1-204ENST00000540738 DEPTORQ8TB45 409 aa15.95■□□□□ 0.14
COLCA1-204ENST00000540738 ZNF341Q9BYN7 854 aa15.95■□□□□ 0.14
COLCA1-204ENST00000540738 CENPHQ9H3R5 247 aa15.95■□□□□ 0.14
COLCA1-204ENST00000540738 STX10O60499 249 aa15.94■□□□□ 0.14
COLCA1-204ENST00000540738 LMBR1Q8WVP7 490 aa15.94■□□□□ 0.14
COLCA1-204ENST00000540738 DDX12PQ92771 950 aa15.94■□□□□ 0.14
COLCA1-204ENST00000540738 PALM3A6NDB9 673 aaPredicted RBP15.94■□□□□ 0.14
COLCA1-204ENST00000540738 FGAP02671 866 aa15.94■□□□□ 0.14
COLCA1-204ENST00000540738 HSPA4P34932 840 aa15.94■□□□□ 0.14
COLCA1-204ENST00000540738 DNA2P51530 1060 aa15.94■□□□□ 0.14
COLCA1-204ENST00000540738 JPH2Q9BR39 696 aaPredicted RBP15.94■□□□□ 0.14
COLCA1-204ENST00000540738 RABGAP1Q9Y3P9 1069 aa15.94■□□□□ 0.14
COLCA1-204ENST00000540738 PCDHA1Q9Y5I3 950 aa15.94■□□□□ 0.14
COLCA1-204ENST00000540738 KIFAP3Q92845 792 aa15.94■□□□□ 0.14
COLCA1-204ENST00000540738 CDHR1Q96JP9 859 aa15.94■□□□□ 0.14
COLCA1-204ENST00000540738 NOX5Q96PH1 765 aa15.94■□□□□ 0.14
COLCA1-204ENST00000540738 CETN3O15182 167 aa15.94■□□□□ 0.14
COLCA1-204ENST00000540738 BMP3P12645 472 aa15.94■□□□□ 0.14
COLCA1-204ENST00000540738 CEP135Q66GS9 1140 aa15.94■□□□□ 0.14
COLCA1-204ENST00000540738 PHKBQ93100 1093 aa15.94■□□□□ 0.14
COLCA1-204ENST00000540738 TEKT3Q9BXF9 490 aa15.94■□□□□ 0.14
COLCA1-204ENST00000540738 GOLGA6L10A0A0M3HER8 536 aa15.93■□□□□ 0.14
COLCA1-204ENST00000540738 SYT1P21579 422 aa15.93■□□□□ 0.14
COLCA1-204ENST00000540738 ZMYM1Q5SVZ6 1142 aa15.93■□□□□ 0.14
COLCA1-204ENST00000540738 POTEB2H3BUK9 544 aa15.93■□□□□ 0.14
COLCA1-204ENST00000540738 TBC1D10BQ4KMP7 808 aaPredicted RBP15.93■□□□□ 0.14
COLCA1-204ENST00000540738 RPAP1Q9BWH6 1393 aaPredicted RBP15.93■□□□□ 0.14
COLCA1-204ENST00000540738 BLIDQ8IZY5 108 aa15.93■□□□□ 0.14
COLCA1-204ENST00000540738 UBXN4Q92575 508 aa15.93■□□□□ 0.14
COLCA1-204ENST00000540738 ADPGKQ9BRR6 497 aa15.93■□□□□ 0.14
COLCA1-204ENST00000540738 A0A0D9SFI3 127 aa15.93■□□□□ 0.14
COLCA1-204ENST00000540738 ADD2P35612 726 aa15.93■□□□□ 0.14
COLCA1-204ENST00000540738 DCAF17Q5H9S7 520 aaPredicted RBP15.93■□□□□ 0.14
COLCA1-204ENST00000540738 METTL13Q8N6R0 699 aa15.93■□□□□ 0.14
COLCA1-204ENST00000540738 hCG_1984214I3L0E3 225 aa15.92■□□□□ 0.14
COLCA1-204ENST00000540738 CRKP46108 304 aa15.92■□□□□ 0.14
COLCA1-204ENST00000540738 PTPN12Q05209 780 aaKnown RBP15.92■□□□□ 0.14
COLCA1-204ENST00000540738 MAP9Q49MG5 647 aa15.92■□□□□ 0.14
COLCA1-204ENST00000540738 MYCT1Q8N699 235 aa15.92■□□□□ 0.14
COLCA1-204ENST00000540738 ZNF713Q8N859 430 aaPredicted RBP15.92■□□□□ 0.14
COLCA1-204ENST00000540738 KIF18AQ8NI77 898 aa15.92■□□□□ 0.14
COLCA1-204ENST00000540738 ADAMTS13Q76LX8 1427 aa15.92■□□□□ 0.14
COLCA1-204ENST00000540738 GDF11O95390 407 aa15.92■□□□□ 0.14
COLCA1-204ENST00000540738 HOXD10P28358 340 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms