RNA–Protein interactions for RNA: ENST00000540280.1

TMEM109-203, Transcript of transmembrane protein 109, humanhuman

TSL 3

Gene TMEM109, Length 724 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM109-203ENST00000540280 LINS1Q8NG48 757 aa13.6□□□□□ -0.23
TMEM109-203ENST00000540280 CERS4Q9HA82 394 aa13.6□□□□□ -0.23
TMEM109-203ENST00000540280 ACACBO00763 2458 aa13.59□□□□□ -0.23
TMEM109-203ENST00000540280 SOWAHBA6NEL2 793 aa13.59□□□□□ -0.23
TMEM109-203ENST00000540280 NEURL1BA8MQ27 555 aa13.59□□□□□ -0.23
TMEM109-203ENST00000540280 TIMP1P01033 207 aa13.59□□□□□ -0.23
TMEM109-203ENST00000540280 CSF2RAP15509 400 aa13.59□□□□□ -0.23
TMEM109-203ENST00000540280 MAPK4P31152 587 aa13.59□□□□□ -0.23
TMEM109-203ENST00000540280 RARSP54136 660 aaKnown RBP13.59□□□□□ -0.23
TMEM109-203ENST00000540280 MAP2K5Q13163 448 aa13.59□□□□□ -0.23
TMEM109-203ENST00000540280 PPIGQ13427 754 aaKnown RBP eCLIP13.59□□□□□ -0.23
TMEM109-203ENST00000540280 LRRC41Q15345 812 aa13.59□□□□□ -0.23
TMEM109-203ENST00000540280 MFSD5Q6N075 450 aa13.59□□□□□ -0.23
TMEM109-203ENST00000540280 GPRC5AQ8NFJ5 357 aa13.59□□□□□ -0.23
TMEM109-203ENST00000540280 SMC4Q9NTJ3 1288 aa13.59□□□□□ -0.23
TMEM109-203ENST00000540280 NDUFB9Q9Y6M9 179 aa13.59□□□□□ -0.23
TMEM109-203ENST00000540280 ATAD5Q96QE3 1844 aa13.59□□□□□ -0.23
TMEM109-203ENST00000540280 CYBAP13498 195 aa13.58□□□□□ -0.24
TMEM109-203ENST00000540280 HMGCS2P54868 508 aa13.58□□□□□ -0.24
TMEM109-203ENST00000540280 Q3C1V9 767 aa13.58□□□□□ -0.24
TMEM109-203ENST00000540280 ASCL5Q7RTU5 278 aa13.58□□□□□ -0.24
TMEM109-203ENST00000540280 PLEKHH3Q7Z736 793 aa13.58□□□□□ -0.24
TMEM109-203ENST00000540280 IQSEC3Q9UPP2 1182 aaPredicted RBP13.58□□□□□ -0.24
TMEM109-203ENST00000540280 GVINP1Q7Z2Y8 2422 aa13.57□□□□□ -0.24
TMEM109-203ENST00000540280 F6X3S4 739 aa13.57□□□□□ -0.24
TMEM109-203ENST00000540280 SPP2Q13103 211 aa13.57□□□□□ -0.24
TMEM109-203ENST00000540280 CHAF1AQ13111 956 aaPredicted RBP13.57□□□□□ -0.24
TMEM109-203ENST00000540280 PABPC4Q13310 644 aaKnown RBP eCLIP13.57□□□□□ -0.243e-7■■■■□ 25.8
TMEM109-203ENST00000540280 GCKRQ14397 625 aa13.57□□□□□ -0.24
TMEM109-203ENST00000540280 CWF19L2Q2TBE0 894 aaKnown RBP13.57□□□□□ -0.24
TMEM109-203ENST00000540280 BEND3Q5T5X7 828 aa13.57□□□□□ -0.24
TMEM109-203ENST00000540280 PSRC1Q6PGN9 363 aaPredicted RBP13.57□□□□□ -0.24
TMEM109-203ENST00000540280 EDC3Q96F86 508 aaKnown RBP13.57□□□□□ -0.24
TMEM109-203ENST00000540280 FAM198AQ9UFP1 575 aa13.57□□□□□ -0.24
TMEM109-203ENST00000540280 ANKRD11Q6UB99 2663 aaPredicted RBP13.57□□□□□ -0.24
TMEM109-203ENST00000540280 SETXQ7Z333 2677 aaKnown RBP13.57□□□□□ -0.24
TMEM109-203ENST00000540280 H7C1W4 665 aa13.56□□□□□ -0.24
TMEM109-203ENST00000540280 PLIN1O60240 522 aa13.56□□□□□ -0.24
TMEM109-203ENST00000540280 ALDH1L1O75891 902 aa13.56□□□□□ -0.24
TMEM109-203ENST00000540280 CCDC174Q6PII3 467 aa13.56□□□□□ -0.24
TMEM109-203ENST00000540280 CCAR1Q8IX12 1150 aaKnown RBP13.56□□□□□ -0.24
TMEM109-203ENST00000540280 ARHGAP45Q92619 1136 aa13.56□□□□□ -0.24
TMEM109-203ENST00000540280 RBPJLQ9UBG7 517 aa13.56□□□□□ -0.24
TMEM109-203ENST00000540280 RALYQ9UKM9 306 aaKnown RBP13.56□□□□□ -0.24
TMEM109-203ENST00000540280 TBX21Q9UL17 535 aa13.56□□□□□ -0.24
TMEM109-203ENST00000540280 PHF24Q9UPV7 400 aa13.56□□□□□ -0.24
TMEM109-203ENST00000540280 LRRFIP2Q9Y608 721 aaKnown RBP13.56□□□□□ -0.24
TMEM109-203ENST00000540280 GAKO14976 1311 aa13.56□□□□□ -0.24
TMEM109-203ENST00000540280 KIF16BQ96L93 1317 aa13.56□□□□□ -0.24
TMEM109-203ENST00000540280 MAP1BP46821 2468 aaKnown RBP13.55□□□□□ -0.24
TMEM109-203ENST00000540280 SLC5A1P13866 664 aa13.55□□□□□ -0.24
TMEM109-203ENST00000540280 HIBADHP31937 336 aaKnown RBP13.55□□□□□ -0.24
TMEM109-203ENST00000540280 ERVK-9P63128 1117 aa13.55□□□□□ -0.24
TMEM109-203ENST00000540280 ERVK-24P63145 666 aa13.55□□□□□ -0.24
TMEM109-203ENST00000540280 IRX3P78415 501 aaPredicted RBP13.55□□□□□ -0.24
TMEM109-203ENST00000540280 ATP2B2Q01814 1243 aa13.55□□□□□ -0.24
TMEM109-203ENST00000540280 FAM47AQ5JRC9 791 aa13.55□□□□□ -0.24
TMEM109-203ENST00000540280 UBE3BQ7Z3V4 1068 aa13.55□□□□□ -0.24
TMEM109-203ENST00000540280 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.55□□□□□ -0.24
TMEM109-203ENST00000540280 NPLOC4Q8TAT6 608 aa13.55□□□□□ -0.24
TMEM109-203ENST00000540280 ALG13Q9NP73 1137 aaKnown RBP13.55□□□□□ -0.24
TMEM109-203ENST00000540280 APBB1O00213 710 aa13.54□□□□□ -0.24
TMEM109-203ENST00000540280 HERVK_113P62684 666 aa13.54□□□□□ -0.24
TMEM109-203ENST00000540280 CDC42EP5Q6NZY7 148 aa13.54□□□□□ -0.24
TMEM109-203ENST00000540280 SLC4A10Q6U841 1118 aa13.54□□□□□ -0.24
TMEM109-203ENST00000540280 FAM84BQ96KN1 310 aaPredicted RBP13.54□□□□□ -0.24
TMEM109-203ENST00000540280 API5Q9BZZ5 524 aaKnown RBP13.54□□□□□ -0.24
TMEM109-203ENST00000540280 SRCIN1Q9C0H9 1055 aa13.54□□□□□ -0.24
TMEM109-203ENST00000540280 UBE2ZQ9H832 354 aaPredicted RBP13.54□□□□□ -0.24
TMEM109-203ENST00000540280 NOB1Q9ULX3 412 aaKnown RBP13.54□□□□□ -0.24
TMEM109-203ENST00000540280 SMCHD1A6NHR9 2005 aa13.54□□□□□ -0.24
TMEM109-203ENST00000540280 A0A1W2PQ45 241 aaPredicted RBP13.53□□□□□ -0.24
TMEM109-203ENST00000540280 A0A1W2PQY0 241 aa13.53□□□□□ -0.24
TMEM109-203ENST00000540280 IPO8O15397 1037 aaKnown RBP13.53□□□□□ -0.24
TMEM109-203ENST00000540280 CTNND1O60716 968 aaKnown RBP13.53□□□□□ -0.24
TMEM109-203ENST00000540280 CASP7P55210 303 aa13.53□□□□□ -0.24
TMEM109-203ENST00000540280 ANKRD33Q7Z3H0 272 aa13.53□□□□□ -0.24
TMEM109-203ENST00000540280 ATOH1Q92858 354 aaPredicted RBP13.53□□□□□ -0.24
TMEM109-203ENST00000540280 PAGR1Q9BTK6 254 aa13.53□□□□□ -0.24
TMEM109-203ENST00000540280 PLA2G12BQ9BX93 195 aa13.53□□□□□ -0.24
TMEM109-203ENST00000540280 CWC22Q9HCG8 908 aaKnown RBP13.53□□□□□ -0.24
TMEM109-203ENST00000540280 PCDHA11Q9Y5I1 949 aa13.53□□□□□ -0.24
TMEM109-203ENST00000540280 DCDC2CA8MYV0 355 aa13.52□□□□□ -0.25
TMEM109-203ENST00000540280 SEPT4O43236 478 aa13.52□□□□□ -0.25
TMEM109-203ENST00000540280 IGHA2P01877 340 aa13.52□□□□□ -0.25
TMEM109-203ENST00000540280 CA3P07451 260 aa13.52□□□□□ -0.25
TMEM109-203ENST00000540280 KCNA5P22460 613 aa13.52□□□□□ -0.25
TMEM109-203ENST00000540280 LEXMQ3ZCV2 418 aa13.52□□□□□ -0.25
TMEM109-203ENST00000540280 PTCRAQ6ISU1 281 aaPredicted RBP13.52□□□□□ -0.25
TMEM109-203ENST00000540280 HHIPL2Q6UWX4 724 aa13.52□□□□□ -0.25
TMEM109-203ENST00000540280 SH3BP5LQ7L8J4 393 aa13.52□□□□□ -0.25
TMEM109-203ENST00000540280 OTOP2Q7RTS6 562 aa13.52□□□□□ -0.25
TMEM109-203ENST00000540280 ZNF280CQ8ND82 737 aa13.52□□□□□ -0.25
TMEM109-203ENST00000540280 ARNTL2Q8WYA1 636 aa13.52□□□□□ -0.25
TMEM109-203ENST00000540280 TOX2Q96NM4 488 aa13.52□□□□□ -0.25
TMEM109-203ENST00000540280 PRRX2Q99811 253 aa13.52□□□□□ -0.25
TMEM109-203ENST00000540280 MRIQ9BWK5 157 aa13.52□□□□□ -0.25
TMEM109-203ENST00000540280 PPP1R12CQ9BZL4 782 aa13.52□□□□□ -0.25
TMEM109-203ENST00000540280 TRPC6Q9Y210 931 aa13.52□□□□□ -0.25
TMEM109-203ENST00000540280 ZNF292O60281 2723 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms