RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 GPHNQ9NQX3 736 aaPredicted RBP10.21□□□□□ -0.78
GGA3-202ENST00000538886 USP17L5A8MUK1 530 aa10.2□□□□□ -0.78
GGA3-202ENST00000538886 TRAK2O60296 914 aa10.2□□□□□ -0.78
GGA3-202ENST00000538886 ENTPD3O75355 529 aa10.2□□□□□ -0.78
GGA3-202ENST00000538886 DGKZQ13574 1117 aa10.2□□□□□ -0.78
GGA3-202ENST00000538886 USP17L10C9JJH3 530 aa10.2□□□□□ -0.78
GGA3-202ENST00000538886 ECE1P42892 770 aa10.2□□□□□ -0.78
GGA3-202ENST00000538886 PLCB2Q00722 1185 aa10.2□□□□□ -0.78
GGA3-202ENST00000538886 SLFN13Q68D06 897 aa10.2□□□□□ -0.78
GGA3-202ENST00000538886 CCDC83Q8IWF9 413 aa10.2□□□□□ -0.78
GGA3-202ENST00000538886 TRIM22Q8IYM9 498 aa10.2□□□□□ -0.78
GGA3-202ENST00000538886 ZC3H15Q8WU90 426 aaKnown RBP10.2□□□□□ -0.78
GGA3-202ENST00000538886 RIOK1Q9BRS2 568 aaKnown RBP10.2□□□□□ -0.78
GGA3-202ENST00000538886 LY75O60449 1722 aa10.2□□□□□ -0.78
GGA3-202ENST00000538886 EEF2P13639 858 aaKnown RBP10.2□□□□□ -0.78
GGA3-202ENST00000538886 VGLL4Q14135 290 aa10.2□□□□□ -0.78
GGA3-202ENST00000538886 ZNF512BQ96KM6 892 aaPredicted RBP10.2□□□□□ -0.78
GGA3-202ENST00000538886 KANSL2Q9H9L4 492 aa10.2□□□□□ -0.78
GGA3-202ENST00000538886 TNKSO95271 1327 aa10.2□□□□□ -0.78
GGA3-202ENST00000538886 AOC2O75106 756 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 METAP2P50579 478 aaKnown RBP eCLIP10.19□□□□□ -0.78
GGA3-202ENST00000538886 USP17L2Q6R6M4 530 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 ACER1Q8TDN7 264 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 CEP95Q96GE4 821 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 EPB41L4AQ9HCS5 686 aaPredicted RBP10.19□□□□□ -0.78
GGA3-202ENST00000538886 N4BP2Q86UW6 1770 aaPredicted RBP10.19□□□□□ -0.78
GGA3-202ENST00000538886 ZBTB43O43298 467 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 PTMAP06454 111 aaKnown RBP10.19□□□□□ -0.78
GGA3-202ENST00000538886 ALAS1P13196 640 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 IBSPP21815 317 aaPredicted RBP10.19□□□□□ -0.78
GGA3-202ENST00000538886 RHBDL3P58872 404 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 C12orf60Q5U649 245 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 HEATR3Q7Z4Q2 680 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 FCHSD1Q86WN1 690 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 RASEFQ8IZ41 740 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 RASSF8Q8NHQ8 419 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 ZFP91Q96JP5 570 aaPredicted RBP10.19□□□□□ -0.78
GGA3-202ENST00000538886 CAPNS2Q96L46 248 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 NCOA5Q9HCD5 579 aaKnown RBP10.19□□□□□ -0.78
GGA3-202ENST00000538886 GOPCQ9HD26 462 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 ZSWIM5Q9P217 1185 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 ARFGEF2Q9Y6D5 1785 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 IRF6O14896 467 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 CNGA1P29973 690 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 ADCK5Q3MIX3 580 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 PNMA1Q8ND90 353 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 CCDC17Q96LX7 622 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 DSCC1Q9BVC3 393 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 SLC26A6Q9BXS9 759 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 HERC5Q9UII4 1024 aaKnown RBP10.19□□□□□ -0.78
GGA3-202ENST00000538886 NUP188Q5SRE5 1749 aa10.19□□□□□ -0.78
GGA3-202ENST00000538886 PARP1P09874 1014 aaKnown RBP10.18□□□□□ -0.78
GGA3-202ENST00000538886 RGMBQ6NW40 437 aa10.18□□□□□ -0.78
GGA3-202ENST00000538886 TBC1D10CQ8IV04 446 aa10.18□□□□□ -0.78
GGA3-202ENST00000538886 GMLQ99445 158 aa10.18□□□□□ -0.78
GGA3-202ENST00000538886 SMC3Q9UQE7 1217 aa10.18□□□□□ -0.78
GGA3-202ENST00000538886 PTPDC1A2A3K4 754 aa10.18□□□□□ -0.78
GGA3-202ENST00000538886 CAPN15O75808 1086 aa10.18□□□□□ -0.78
GGA3-202ENST00000538886 SP4Q02446 784 aa10.18□□□□□ -0.78
GGA3-202ENST00000538886 KIF22Q14807 665 aa10.18□□□□□ -0.78
GGA3-202ENST00000538886 FAM83BQ5T0W9 1011 aa10.18□□□□□ -0.78
GGA3-202ENST00000538886 ZNF384Q8TF68 577 aa10.18□□□□□ -0.78
GGA3-202ENST00000538886 VTI1AQ96AJ9 217 aa10.18□□□□□ -0.78
GGA3-202ENST00000538886 SWAP70Q9UH65 585 aa10.18□□□□□ -0.78
GGA3-202ENST00000538886 MTERF4Q7Z6M4 381 aaKnown RBP10.18□□□□□ -0.78
GGA3-202ENST00000538886 ZBTB21Q9ULJ3 1066 aa10.18□□□□□ -0.78
GGA3-202ENST00000538886 TTLL1O95922 423 aa10.17□□□□□ -0.78
GGA3-202ENST00000538886 KIF5BP33176 963 aa10.17□□□□□ -0.78
GGA3-202ENST00000538886 ZNF76P36508 570 aa10.17□□□□□ -0.78
GGA3-202ENST00000538886 ZNF280AP59817 542 aaPredicted RBP10.17□□□□□ -0.78
GGA3-202ENST00000538886 PPP4CP60510 307 aa10.17□□□□□ -0.78
GGA3-202ENST00000538886 TMEM179Q6ZVK1 233 aa10.17□□□□□ -0.78
GGA3-202ENST00000538886 DHX32Q7L7V1 743 aaKnown RBP10.17□□□□□ -0.78
GGA3-202ENST00000538886 ZNF280CQ8ND82 737 aa10.17□□□□□ -0.78
GGA3-202ENST00000538886 RAD50Q92878 1312 aa10.17□□□□□ -0.78
GGA3-202ENST00000538886 CYP2C8P10632 490 aa10.17□□□□□ -0.78
GGA3-202ENST00000538886 CEBPZQ03701 1054 aaKnown RBP10.17□□□□□ -0.78
GGA3-202ENST00000538886 SNAPC2Q13487 334 aa10.17□□□□□ -0.78
GGA3-202ENST00000538886 FAM83AQ86UY5 434 aa10.17□□□□□ -0.78
GGA3-202ENST00000538886 ZSCAN10Q96SZ4 725 aaPredicted RBP10.17□□□□□ -0.78
GGA3-202ENST00000538886 CPA4Q9UI42 421 aa10.17□□□□□ -0.78
GGA3-202ENST00000538886 TAF1LQ8IZX4 1826 aa10.17□□□□□ -0.78
GGA3-202ENST00000538886 HMGB1P09429 215 aaKnown RBP10.17□□□□□ -0.78
GGA3-202ENST00000538886 C1QTNF8P60827 252 aa10.17□□□□□ -0.78
GGA3-202ENST00000538886 RTN1Q16799 776 aa10.17□□□□□ -0.78
GGA3-202ENST00000538886 VIRMAQ69YN4 1812 aaKnown RBP10.17□□□□□ -0.78
GGA3-202ENST00000538886 KIF3CO14782 793 aa10.16□□□□□ -0.78
GGA3-202ENST00000538886 SORBS3O60504 671 aa10.16□□□□□ -0.78
GGA3-202ENST00000538886 CFBP00751 764 aa10.16□□□□□ -0.78
GGA3-202ENST00000538886 CAP2P40123 477 aa10.16□□□□□ -0.78
GGA3-202ENST00000538886 EEPD1Q7L9B9 569 aa10.16□□□□□ -0.78
GGA3-202ENST00000538886 ERO1BQ86YB8 467 aa10.16□□□□□ -0.78
GGA3-202ENST00000538886 UBR2Q8IWV8 1755 aa10.16□□□□□ -0.78
GGA3-202ENST00000538886 USP26Q9BXU7 913 aa10.16□□□□□ -0.78
GGA3-202ENST00000538886 TAF6LQ9Y6J9 622 aa10.16□□□□□ -0.78
GGA3-202ENST00000538886 LAMB4A4D0S4 1761 aa10.16□□□□□ -0.78
GGA3-202ENST00000538886 SALL1Q9NSC2 1324 aa10.16□□□□□ -0.78
GGA3-202ENST00000538886 F5H6K3 240 aa10.16□□□□□ -0.78
GGA3-202ENST00000538886 TBC1D8O95759 1140 aa10.16□□□□□ -0.78
GGA3-202ENST00000538886 APLP1P51693 650 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms