RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 SLC10A3P09131 477 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 TOP1P11387 765 aaKnown RBP4.18□□□□□ -1.74
PTPN22-211ENST00000538253 C12orf60Q5U649 245 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 MAP1SQ66K74 1059 aaPredicted RBP4.18□□□□□ -1.74
PTPN22-211ENST00000538253 C16orf86Q6ZW13 317 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 CATIPQ7Z7H3 387 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 DGKHQ86XP1 1220 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 IFNL3Q8IZI9 196 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 CERS5Q8N5B7 392 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 ZNF280CQ8ND82 737 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 CAPNS2Q96L46 248 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 GPR101Q96P66 508 aaPredicted RBP4.18□□□□□ -1.74
PTPN22-211ENST00000538253 RBM28Q9NW13 759 aaKnown RBP4.18□□□□□ -1.74
PTPN22-211ENST00000538253 RABGAP1Q9Y3P9 1069 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 CNTNAP1P78357 1384 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 ROBO3Q96MS0 1386 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 SMARCA5O60264 1052 aaPredicted RBP4.18□□□□□ -1.74
PTPN22-211ENST00000538253 PLA2G6O60733 806 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 SMARCA1P28370 1054 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 MCM5P33992 734 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 CAP2P40123 477 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 PPARAQ07869 468 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 DNTTIP2Q5QJE6 756 aaKnown RBP4.18□□□□□ -1.74
PTPN22-211ENST00000538253 AKNAD1Q5T1N1 836 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 OLFM4Q6UX06 510 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 MAPKAPK5Q8IW41 473 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 CTCFLQ8NI51 663 aaPredicted RBP4.18□□□□□ -1.74
PTPN22-211ENST00000538253 WNK4Q96J92 1243 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 C12orf42Q96LP6 360 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 NAP1L4Q99733 375 aaKnown RBP4.18□□□□□ -1.74
PTPN22-211ENST00000538253 CFHR5Q9BXR6 569 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 GLIS2Q9BZE0 524 aaPredicted RBP4.18□□□□□ -1.74
PTPN22-211ENST00000538253 KIAA1683Q9H0B3 1180 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 KAT14Q9H8E8 782 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 DCP1AQ9NPI6 582 aaPredicted RBP4.18□□□□□ -1.74
PTPN22-211ENST00000538253 ANO2Q9NQ90 1003 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 IVNS1ABPQ9Y6Y0 642 aa4.18□□□□□ -1.74
PTPN22-211ENST00000538253 SALL3Q9BXA9 1300 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 CCDC69A6NI79 296 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 MINDY4BA8MYZ0 360 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 SGSM2O43147 1006 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 ST18O60284 1047 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 TTLL1O95922 423 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 OAZ1P54368 228 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 ICA1Q05084 483 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 IRF5Q13568 498 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 DIXDC1Q155Q3 683 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 ASPRV1Q53RT3 343 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 SH3D19Q5HYK7 790 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 NBPF11Q86T75 865 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 NEDD1Q8NHV4 660 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 STAG1Q8WVM7 1258 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 KLRG1Q96E93 195 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 ZSCAN31Q96LW9 406 aaPredicted RBP4.17□□□□□ -1.74
PTPN22-211ENST00000538253 SEZ6LQ9BYH1 1024 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 TM6SF1Q9BZW5 370 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 ARMT1Q9H993 441 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 RRAGDQ9NQL2 400 aaPredicted RBP4.17□□□□□ -1.74
PTPN22-211ENST00000538253 MAP3K20Q9NYL2 800 aaKnown RBP4.17□□□□□ -1.74
PTPN22-211ENST00000538253 TCEAL9Q9UHQ7 104 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 FEM1BQ9UK73 627 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 KCNH4Q9UQ05 1017 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 LTBP1Q14766 1721 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 TTC36A6NLP5 189 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 CAPN15O75808 1086 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 DDAH1O94760 285 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 ITGBL1O95965 494 aaPredicted RBP4.17□□□□□ -1.74
PTPN22-211ENST00000538253 CHMLP26374 656 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 KLRK1P26718 216 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 RHBDL3P58872 404 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 NMIQ13287 307 aaPredicted RBP4.17□□□□□ -1.74
PTPN22-211ENST00000538253 NBPF9Q3BBW0 867 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 SPRYD7Q5W111 196 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 MCF2L2Q86YR7 1114 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 SHCBP1Q8NEM2 672 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.17□□□□□ -1.74
PTPN22-211ENST00000538253 SH3RF3Q8TEJ3 882 aaPredicted RBP4.17□□□□□ -1.74
PTPN22-211ENST00000538253 SMCR8Q8TEV9 937 aaPredicted RBP4.17□□□□□ -1.74
PTPN22-211ENST00000538253 SOCS4Q8WXH5 440 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 COA7Q96BR5 231 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 RIOK1Q9BRS2 568 aaKnown RBP4.17□□□□□ -1.74
PTPN22-211ENST00000538253 ESYT1Q9BSJ8 1104 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 BRMS1Q9HCU9 246 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 WDR33Q9C0J8 1336 aaKnown RBP4.17□□□□□ -1.74
PTPN22-211ENST00000538253 USP17L12C9JPN9 530 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 USP17L21D6R901 530 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 MAPK4P31152 587 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 NFXL1Q6ZNB6 911 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 MIGA1Q8NAN2 632 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 TNPO1Q92973 898 aaKnown RBP4.17□□□□□ -1.74
PTPN22-211ENST00000538253 NRBP1Q9UHY1 535 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 ZBTB21Q9ULJ3 1066 aa4.17□□□□□ -1.74
PTPN22-211ENST00000538253 ISY1Q9ULR0 285 aaKnown RBP4.17□□□□□ -1.74
PTPN22-211ENST00000538253 PLIN4Q96Q06 1357 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 CCL15-CCL14A0A0B4J2E2 113 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 TESPA1A2RU30 521 aaPredicted RBP4.16□□□□□ -1.74
PTPN22-211ENST00000538253 FKTNO75072 461 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 TM4SF4P48230 202 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 CDK8P49336 464 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 FCGRTP55899 365 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms