RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 RTFDC1Q9BY42 306 aaPredicted RBP7.41□□□□□ -1.22
DDB1-210ENST00000538129 BSDC1Q9NW68 430 aaPredicted RBP7.41□□□□□ -1.22
DDB1-210ENST00000538129 IQSEC3Q9UPP2 1182 aaPredicted RBP7.41□□□□□ -1.22
DDB1-210ENST00000538129 MSX1P28360 303 aa7.4□□□□□ -1.22
DDB1-210ENST00000538129 MFAP1P55081 439 aaKnown RBP7.4□□□□□ -1.22
DDB1-210ENST00000538129 INSM1Q01101 510 aaPredicted RBP7.4□□□□□ -1.22
DDB1-210ENST00000538129 FOXK2Q01167 660 aa7.4□□□□□ -1.22
DDB1-210ENST00000538129 C9orf131Q5VYM1 1079 aa7.4□□□□□ -1.22
DDB1-210ENST00000538129 OLFM4Q6UX06 510 aa7.4□□□□□ -1.22
DDB1-210ENST00000538129 DPP8Q6V1X1 898 aaPredicted RBP7.4□□□□□ -1.22
DDB1-210ENST00000538129 STAG2Q8N3U4 1231 aa7.4□□□□□ -1.22
DDB1-210ENST00000538129 ANKRD44Q8N8A2 993 aa7.4□□□□□ -1.22
DDB1-210ENST00000538129 SUPT20HQ8NEM7 779 aa7.4□□□□□ -1.22
DDB1-210ENST00000538129 MPHOSPH8Q99549 860 aa7.4□□□□□ -1.22
DDB1-210ENST00000538129 CHMP4BQ9H444 224 aaKnown RBP7.4□□□□□ -1.22
DDB1-210ENST00000538129 BICC1Q9H694 974 aaKnown RBP7.4□□□□□ -1.22
DDB1-210ENST00000538129 GPAMQ9HCL2 828 aa7.4□□□□□ -1.22
DDB1-210ENST00000538129 ANKIB1Q9P2G1 1089 aa7.4□□□□□ -1.22
DDB1-210ENST00000538129 TNNQ9UQP3 1299 aa7.4□□□□□ -1.22
DDB1-210ENST00000538129 MTMR7Q9Y216 660 aa7.4□□□□□ -1.22
DDB1-210ENST00000538129 DICER1Q9UPY3 1922 aaKnown RBP7.39□□□□□ -1.23
DDB1-210ENST00000538129 GNAI2P04899 355 aa7.39□□□□□ -1.23
DDB1-210ENST00000538129 RLBP1P12271 317 aa7.39□□□□□ -1.23
DDB1-210ENST00000538129 IGFBP4P22692 258 aa7.39□□□□□ -1.23
DDB1-210ENST00000538129 PRELPP51888 382 aa7.39□□□□□ -1.23
DDB1-210ENST00000538129 EPHA4P54764 986 aa7.39□□□□□ -1.23
DDB1-210ENST00000538129 NLRP8Q86W28 1048 aa7.39□□□□□ -1.23
DDB1-210ENST00000538129 PANK1Q8TE04 598 aa7.39□□□□□ -1.23
DDB1-210ENST00000538129 SCG3Q8WXD2 468 aaKnown RBP7.39□□□□□ -1.23
DDB1-210ENST00000538129 MEIS3Q99687 375 aa7.39□□□□□ -1.23
DDB1-210ENST00000538129 ANKRD2Q9GZV1 360 aa7.39□□□□□ -1.23
DDB1-210ENST00000538129 TSPAN10Q9H1Z9 355 aaPredicted RBP7.39□□□□□ -1.23
DDB1-210ENST00000538129 CRISPLD1Q9H336 500 aa7.39□□□□□ -1.23
DDB1-210ENST00000538129 RNF181Q9P0P0 153 aa7.39□□□□□ -1.23
DDB1-210ENST00000538129 MINPP1Q9UNW1 487 aa7.39□□□□□ -1.23
DDB1-210ENST00000538129 SNED1Q8TER0 1413 aa7.38□□□□□ -1.23
DDB1-210ENST00000538129 XDHP47989 1333 aa7.38□□□□□ -1.23
DDB1-210ENST00000538129 PLIN1O60240 522 aa7.38□□□□□ -1.23
DDB1-210ENST00000538129 DKK1O94907 266 aa7.38□□□□□ -1.23
DDB1-210ENST00000538129 ATP2B4P23634 1241 aa7.38□□□□□ -1.23
DDB1-210ENST00000538129 YY1P25490 414 aa7.38□□□□□ -1.23
DDB1-210ENST00000538129 IARSP41252 1262 aaKnown RBP7.38□□□□□ -1.23
DDB1-210ENST00000538129 GPSM2P81274 684 aa7.38□□□□□ -1.23
DDB1-210ENST00000538129 RASSF7Q02833 373 aa7.38□□□□□ -1.23
DDB1-210ENST00000538129 MTX1Q13505 466 aa7.38□□□□□ -1.23
DDB1-210ENST00000538129 TAF7LQ5H9L4 462 aa7.38□□□□□ -1.23
DDB1-210ENST00000538129 C1orf53Q5VUE5 145 aa7.38□□□□□ -1.23
DDB1-210ENST00000538129 LDHAL6AQ6ZMR3 332 aa7.38□□□□□ -1.23
DDB1-210ENST00000538129 ITPRIPQ8IWB1 547 aa7.38□□□□□ -1.23
DDB1-210ENST00000538129 TBC1D16Q8TBP0 767 aa7.38□□□□□ -1.23
DDB1-210ENST00000538129 JDP2Q8WYK2 163 aa7.38□□□□□ -1.23
DDB1-210ENST00000538129 ZNF277Q9NRM2 450 aaPredicted RBP7.38□□□□□ -1.23
DDB1-210ENST00000538129 DDX19BQ9UMR2 479 aa7.38□□□□□ -1.23
DDB1-210ENST00000538129 LEMD3Q9Y2U8 911 aa7.38□□□□□ -1.23
DDB1-210ENST00000538129 LRRFIP2Q9Y608 721 aaKnown RBP7.38□□□□□ -1.23
DDB1-210ENST00000538129 PATL2C9JE40 543 aaKnown RBP7.37□□□□□ -1.23
DDB1-210ENST00000538129 RFX5P48382 616 aaPredicted RBP7.37□□□□□ -1.23
DDB1-210ENST00000538129 HIRAP54198 1017 aaPredicted RBP7.37□□□□□ -1.23
DDB1-210ENST00000538129 ATP8B2P98198 1209 aa7.37□□□□□ -1.23
DDB1-210ENST00000538129 KIAA2012Q0VF49 1180 aa7.37□□□□□ -1.23
DDB1-210ENST00000538129 MVPQ14764 893 aaKnown RBP7.37□□□□□ -1.23
DDB1-210ENST00000538129 DBN1Q16643 649 aa7.37□□□□□ -1.23
DDB1-210ENST00000538129 RHPN1Q8TCX5 695 aa7.37□□□□□ -1.23
DDB1-210ENST00000538129 ZNF837Q96EG3 531 aaPredicted RBP7.37□□□□□ -1.23
DDB1-210ENST00000538129 EYA3Q99504 573 aa7.37□□□□□ -1.23
DDB1-210ENST00000538129 CFHR5Q9BXR6 569 aa7.37□□□□□ -1.23
DDB1-210ENST00000538129 ZC3H12CQ9C0D7 883 aaKnown RBP7.37□□□□□ -1.23
DDB1-210ENST00000538129 CNNM1Q9NRU3 951 aa7.37□□□□□ -1.23
DDB1-210ENST00000538129 POLLQ9UGP5 575 aa7.37□□□□□ -1.23
DDB1-210ENST00000538129 GGA1Q9UJY5 639 aa7.37□□□□□ -1.23
DDB1-210ENST00000538129 RIPOR2Q9Y4F9 1068 aa7.37□□□□□ -1.23
DDB1-210ENST00000538129 LRRC37AA6NMS7 1700 aa7.37□□□□□ -1.23
DDB1-210ENST00000538129 MROH5Q6ZUA9 1318 aa7.36□□□□□ -1.23
DDB1-210ENST00000538129 COL4A1P02462 1669 aa7.36□□□□□ -1.23
DDB1-210ENST00000538129 FAM181BA6NEQ2 426 aa7.36□□□□□ -1.23
DDB1-210ENST00000538129 FZD9O00144 591 aa7.36□□□□□ -1.23
DDB1-210ENST00000538129 EYA2O00167 538 aa7.36□□□□□ -1.23
DDB1-210ENST00000538129 SRGAP3O43295 1099 aa7.36□□□□□ -1.23
DDB1-210ENST00000538129 PPIP5K2O43314 1243 aa7.36□□□□□ -1.23
DDB1-210ENST00000538129 WIPF1O43516 503 aa7.36□□□□□ -1.23
DDB1-210ENST00000538129 CIAO1O76071 339 aa7.36□□□□□ -1.23
DDB1-210ENST00000538129 RRP1P56182 461 aaKnown RBP7.36□□□□□ -1.23
DDB1-210ENST00000538129 PTPN12Q05209 780 aaKnown RBP7.36□□□□□ -1.23
DDB1-210ENST00000538129 CHRNDQ07001 517 aa7.36□□□□□ -1.23
DDB1-210ENST00000538129 TBCELQ5QJ74 424 aa7.36□□□□□ -1.23
DDB1-210ENST00000538129 RUBCNLQ9H714 662 aa7.36□□□□□ -1.23
DDB1-210ENST00000538129 COPRSQ9NQ92 184 aa7.36□□□□□ -1.23
DDB1-210ENST00000538129 ZBTB40Q9NUA8 1239 aa7.36□□□□□ -1.23
DDB1-210ENST00000538129 ZNRF3Q9ULT6 936 aa7.36□□□□□ -1.23
DDB1-210ENST00000538129 ZNF804BA4D1E1 1349 aa7.35□□□□□ -1.23
DDB1-210ENST00000538129 KDM2BQ8NHM5 1336 aa7.35□□□□□ -1.23
DDB1-210ENST00000538129 GLTPD2A6NH11 291 aa7.35□□□□□ -1.23
DDB1-210ENST00000538129 UFL1O94874 794 aa7.35□□□□□ -1.23
DDB1-210ENST00000538129 IL15P40933 162 aaPredicted RBP7.35□□□□□ -1.23
DDB1-210ENST00000538129 EIF6P56537 245 aaKnown RBP7.35□□□□□ -1.23
DDB1-210ENST00000538129 AOC3Q16853 763 aa7.35□□□□□ -1.23
DDB1-210ENST00000538129 C20orf194Q5TEA3 1177 aa7.35□□□□□ -1.23
DDB1-210ENST00000538129 C15orf52Q6ZUT6 534 aaKnown RBP7.35□□□□□ -1.23
DDB1-210ENST00000538129 SLC51AQ86UW1 340 aa7.35□□□□□ -1.23
DDB1-210ENST00000538129 RPAP2Q8IXW5 612 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms