RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 GLT8D2Q9H1C3 349 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 SEC31BQ9NQW1 1179 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 KNDC1Q76NI1 1749 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 BTBD18B2RXH4 712 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 GCOM1H8Y6P7 765 aaPredicted RBP11.3□□□□□ -0.6
GGA3-201ENST00000537686 PFKFB2O60825 505 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 MYZAPP0CAP1 466 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 RAD51AP2Q09MP3 1159 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 UBE3CQ15386 1083 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 SELENOOQ9BVL4 669 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 TUBB4AP04350 444 aa11.29□□□□□ -0.6
GGA3-201ENST00000537686 GJC1P36383 396 aa11.29□□□□□ -0.6
GGA3-201ENST00000537686 PPP1R2P41236 205 aa11.29□□□□□ -0.6
GGA3-201ENST00000537686 UBE4AQ14139 1066 aa11.29□□□□□ -0.6
GGA3-201ENST00000537686 CCDC122Q5T0U0 273 aa11.29□□□□□ -0.6
GGA3-201ENST00000537686 DYMQ7RTS9 669 aa11.29□□□□□ -0.6
GGA3-201ENST00000537686 ZBTB9Q96C00 473 aa11.29□□□□□ -0.6
GGA3-201ENST00000537686 PICK1Q9NRD5 415 aa11.29□□□□□ -0.6
GGA3-201ENST00000537686 POSTNQ15063 836 aa11.29□□□□□ -0.6
GGA3-201ENST00000537686 ZMYM1Q5SVZ6 1142 aa11.29□□□□□ -0.6
GGA3-201ENST00000537686 ZNF589Q86UQ0 364 aaPredicted RBP11.29□□□□□ -0.6
GGA3-201ENST00000537686 TRMT44Q8IYL2 757 aaKnown RBP11.29□□□□□ -0.6
GGA3-201ENST00000537686 FAM107BQ9H098 131 aa11.29□□□□□ -0.6
GGA3-201ENST00000537686 CD2BP2O95400 341 aaKnown RBP11.29□□□□□ -0.6
GGA3-201ENST00000537686 HARSP12081 509 aaKnown RBP11.29□□□□□ -0.6
GGA3-201ENST00000537686 LMAN1P49257 510 aa11.29□□□□□ -0.6
GGA3-201ENST00000537686 SCNN1DP51172 638 aa11.29□□□□□ -0.6
GGA3-201ENST00000537686 PTPN12Q05209 780 aaKnown RBP11.29□□□□□ -0.6
GGA3-201ENST00000537686 PRKG1Q13976 671 aa11.29□□□□□ -0.6
GGA3-201ENST00000537686 CNNM4Q6P4Q7 775 aa11.29□□□□□ -0.6
GGA3-201ENST00000537686 FAM196AQ6ZSG2 479 aa11.29□□□□□ -0.6
GGA3-201ENST00000537686 FNBP4Q8N3X1 1017 aaPredicted RBP11.29□□□□□ -0.6
GGA3-201ENST00000537686 PPP1R9BQ96SB3 815 aa11.29□□□□□ -0.6
GGA3-201ENST00000537686 LZTS2Q9BRK4 669 aa11.29□□□□□ -0.6
GGA3-201ENST00000537686 ATG3Q9NT62 314 aa11.29□□□□□ -0.6
GGA3-201ENST00000537686 SYNRGQ9UMZ2 1314 aa11.28□□□□□ -0.6
GGA3-201ENST00000537686 ADAMTSL3P82987 1691 aa11.28□□□□□ -0.6
GGA3-201ENST00000537686 FSD2A1L4K1 749 aa11.28□□□□□ -0.6
GGA3-201ENST00000537686 CETN3O15182 167 aa11.28□□□□□ -0.6
GGA3-201ENST00000537686 DOK7Q18PE1 504 aa11.28□□□□□ -0.6
GGA3-201ENST00000537686 ADALQ6DHV7 355 aa11.28□□□□□ -0.6
GGA3-201ENST00000537686 NCAPH2Q6IBW4 605 aa11.28□□□□□ -0.6
GGA3-201ENST00000537686 NLRP10Q86W26 655 aa11.28□□□□□ -0.6
GGA3-201ENST00000537686 NOSTRINQ8IVI9 506 aa11.28□□□□□ -0.6
GGA3-201ENST00000537686 GPR108Q9NPR9 543 aa11.28□□□□□ -0.6
GGA3-201ENST00000537686 CPDO75976 1380 aa11.28□□□□□ -0.6
GGA3-201ENST00000537686 IGKV5-2P06315 115 aa11.28□□□□□ -0.6
GGA3-201ENST00000537686 KRT9P35527 623 aa11.28□□□□□ -0.6
GGA3-201ENST00000537686 ZNF75DP51815 510 aa11.28□□□□□ -0.6
GGA3-201ENST00000537686 PAK1Q13153 545 aa11.28□□□□□ -0.6
GGA3-201ENST00000537686 FBXO18Q8NFZ0 1043 aa11.28□□□□□ -0.6
GGA3-201ENST00000537686 ZNF804BA4D1E1 1349 aa11.28□□□□□ -0.6
GGA3-201ENST00000537686 SMCO2A6NFE2 343 aa11.28□□□□□ -0.6
GGA3-201ENST00000537686 SASH1O94885 1247 aa11.28□□□□□ -0.6
GGA3-201ENST00000537686 PDIA3P30101 505 aaKnown RBP11.28□□□□□ -0.6
GGA3-201ENST00000537686 SMC1AQ14683 1233 aaKnown RBP11.28□□□□□ -0.6
GGA3-201ENST00000537686 DPH6Q7L8W6 267 aa11.28□□□□□ -0.6
GGA3-201ENST00000537686 C17orf53Q8N3J3 647 aaPredicted RBP11.28□□□□□ -0.6
GGA3-201ENST00000537686 CEP112Q8N8E3 955 aa11.28□□□□□ -0.6
GGA3-201ENST00000537686 VTI1AQ96AJ9 217 aa11.28□□□□□ -0.6
GGA3-201ENST00000537686 ZSCAN10Q96SZ4 725 aaPredicted RBP11.28□□□□□ -0.6
GGA3-201ENST00000537686 ARHGEF35A5YM69 484 aa11.27□□□□□ -0.6
GGA3-201ENST00000537686 NR1I2O75469 434 aa11.27□□□□□ -0.6
GGA3-201ENST00000537686 CIAO1O76071 339 aa11.27□□□□□ -0.6
GGA3-201ENST00000537686 ATP2B4P23634 1241 aa11.27□□□□□ -0.6
GGA3-201ENST00000537686 CALCRLQ16602 461 aa11.27□□□□□ -0.6
GGA3-201ENST00000537686 KRT222Q8N1A0 295 aa11.27□□□□□ -0.6
GGA3-201ENST00000537686 GOLGA1Q92805 767 aa11.27□□□□□ -0.6
GGA3-201ENST00000537686 TRERF1Q96PN7 1200 aa11.27□□□□□ -0.6
GGA3-201ENST00000537686 HOMER2Q9NSB8 354 aa11.27□□□□□ -0.6
GGA3-201ENST00000537686 CCDC169A6NNP5 214 aa11.27□□□□□ -0.61
GGA3-201ENST00000537686 TMEM110-MUSTN1A8MSY1 372 aa11.27□□□□□ -0.61
GGA3-201ENST00000537686 KLRF2D3W0D1 207 aa11.27□□□□□ -0.61
GGA3-201ENST00000537686 MYCLP12524 364 aaPredicted RBP11.27□□□□□ -0.61
GGA3-201ENST00000537686 EEF2P13639 858 aaKnown RBP11.27□□□□□ -0.61
GGA3-201ENST00000537686 PFKFB1P16118 471 aa11.27□□□□□ -0.61
GGA3-201ENST00000537686 PRPHP41219 470 aa11.27□□□□□ -0.61
GGA3-201ENST00000537686 NLRP12P59046 1061 aa11.27□□□□□ -0.61
GGA3-201ENST00000537686 MAEAQ7L5Y9 396 aa11.27□□□□□ -0.61
GGA3-201ENST00000537686 CCDC91Q7Z6B0 441 aa11.27□□□□□ -0.61
GGA3-201ENST00000537686 LMBR1Q8WVP7 490 aa11.27□□□□□ -0.61
GGA3-201ENST00000537686 RRAGDQ9NQL2 400 aaPredicted RBP11.27□□□□□ -0.61
GGA3-201ENST00000537686 TAB2Q9NYJ8 693 aa11.27□□□□□ -0.61
GGA3-201ENST00000537686 SERTAD1Q9UHV2 236 aa11.27□□□□□ -0.61
GGA3-201ENST00000537686 FRMD4BQ9Y2L6 1034 aa11.27□□□□□ -0.61
GGA3-201ENST00000537686 PLCB3Q01970 1234 aa11.27□□□□□ -0.61
GGA3-201ENST00000537686 BIRC3Q13489 604 aa11.27□□□□□ -0.61
GGA3-201ENST00000537686 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.27□□□□□ -0.61
GGA3-201ENST00000537686 NIM1KQ8IY84 436 aa11.27□□□□□ -0.61
GGA3-201ENST00000537686 SUPT20HQ8NEM7 779 aa11.27□□□□□ -0.61
GGA3-201ENST00000537686 PLCD4Q9BRC7 762 aa11.27□□□□□ -0.61
GGA3-201ENST00000537686 KIAA1468Q9P260 1216 aa11.27□□□□□ -0.61
GGA3-201ENST00000537686 DDX39AO00148 427 aaKnown RBP11.26□□□□□ -0.61
GGA3-201ENST00000537686 RHOXF2BP0C7M4 288 aa11.26□□□□□ -0.61
GGA3-201ENST00000537686 GOLGA8HP0CJ92 632 aa11.26□□□□□ -0.61
GGA3-201ENST00000537686 GPIHBP1Q8IV16 184 aa11.26□□□□□ -0.61
GGA3-201ENST00000537686 RHOXF2Q9BQY4 288 aa11.26□□□□□ -0.61
GGA3-201ENST00000537686 QTRT2Q9H974 415 aaKnown RBP11.26□□□□□ -0.61
GGA3-201ENST00000537686 EPB41P11171 864 aaKnown RBP11.26□□□□□ -0.61
GGA3-201ENST00000537686 PDE6BP35913 854 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms