RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 SYNRGQ9UMZ2 1314 aa13.82□□□□□ -0.2
CPSF7-218ENST00000537641 MYH14Q7Z406 1995 aaKnown RBP13.82□□□□□ -0.2
CPSF7-218ENST00000537641 CCDC196A0A1B0GTZ2 297 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 MFAP3LO75121 409 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 EIF3JO75822 258 aaKnown RBP13.81□□□□□ -0.2
CPSF7-218ENST00000537641 IDH1O75874 414 aaKnown RBP13.81□□□□□ -0.2
CPSF7-218ENST00000537641 INTS5Q6P9B9 1019 aaKnown RBP13.81□□□□□ -0.2
CPSF7-218ENST00000537641 RASGRP2Q7LDG7 609 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 CNGA4Q8IV77 575 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 IQUBQ8NA54 791 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 MED15Q96RN5 788 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 DESI2Q9BSY9 194 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 GBP3Q9H0R5 595 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 SAMSN1Q9NSI8 373 aaKnown RBP13.81□□□□□ -0.2
CPSF7-218ENST00000537641 TTF2Q9UNY4 1162 aaKnown RBP13.81□□□□□ -0.2
CPSF7-218ENST00000537641 MROH5Q6ZUA9 1318 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 A0A0U1RQG5 324 aaPredicted RBP13.81□□□□□ -0.2
CPSF7-218ENST00000537641 BMP15O95972 392 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 ST5P78524 1137 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 GRIN1Q05586 938 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 RAD51AP2Q09MP3 1159 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 SART3Q15020 963 aaKnown RBP13.81□□□□□ -0.2
CPSF7-218ENST00000537641 SPECC1Q5M775 1068 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 AKNAD1Q5T1N1 836 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 CDKAL1Q5VV42 579 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 RAD9BQ6WBX8 426 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 HDXQ7Z353 690 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 IFNL3Q8IZI9 196 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 IGSF22Q8N9C0 903 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 GOLGA5Q8TBA6 731 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 STAG1Q8WVM7 1258 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 MYL10Q9BUA6 226 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 NAPBQ9H115 298 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 EPB41L4AQ9HCS5 686 aaPredicted RBP13.81□□□□□ -0.2
CPSF7-218ENST00000537641 MYH2Q9UKX2 1941 aa13.81□□□□□ -0.2
CPSF7-218ENST00000537641 SOWAHDA6NJG2 315 aa13.8□□□□□ -0.2
CPSF7-218ENST00000537641 CUL4BQ13620 913 aa13.8□□□□□ -0.2
CPSF7-218ENST00000537641 WTAPQ15007 396 aa13.8□□□□□ -0.2
CPSF7-218ENST00000537641 PUM3Q15397 648 aaKnown RBP13.8□□□□□ -0.2
CPSF7-218ENST00000537641 ZNF827Q17R98 1081 aa13.8□□□□□ -0.2
CPSF7-218ENST00000537641 SH3RF1Q7Z6J0 888 aa13.8□□□□□ -0.2
CPSF7-218ENST00000537641 TMTC2Q8N394 836 aa13.8□□□□□ -0.2
CPSF7-218ENST00000537641 ZSWIM5Q9P217 1185 aa13.8□□□□□ -0.2
CPSF7-218ENST00000537641 MYO1AQ9UBC5 1043 aa13.8□□□□□ -0.2
CPSF7-218ENST00000537641 ADD3Q9UEY8 706 aaKnown RBP13.8□□□□□ -0.2
CPSF7-218ENST00000537641 WWC3Q9ULE0 1092 aa13.8□□□□□ -0.2
CPSF7-218ENST00000537641 SPATA31A5Q5VU36 1347 aa13.8□□□□□ -0.2
CPSF7-218ENST00000537641 SPATA31A7Q8IWB4 1347 aa13.8□□□□□ -0.2
CPSF7-218ENST00000537641 DLEC1Q9Y238 1755 aa13.79□□□□□ -0.2
CPSF7-218ENST00000537641 ADAMTS2O95450 1211 aa13.79□□□□□ -0.2
CPSF7-218ENST00000537641 CAPN2P17655 700 aa13.79□□□□□ -0.2
CPSF7-218ENST00000537641 GNAT2P19087 354 aa13.79□□□□□ -0.2
CPSF7-218ENST00000537641 GTF2E1P29083 439 aaPredicted RBP13.79□□□□□ -0.2
CPSF7-218ENST00000537641 CRKLP46109 303 aaKnown RBP13.79□□□□□ -0.2
CPSF7-218ENST00000537641 MTF1Q14872 753 aa13.79□□□□□ -0.2
CPSF7-218ENST00000537641 PPP2R5BQ15173 497 aa13.79□□□□□ -0.2
CPSF7-218ENST00000537641 ZSCAN26Q16670 478 aa13.79□□□□□ -0.2
CPSF7-218ENST00000537641 WHAMMP3Q1A5X7 153 aa13.79□□□□□ -0.2
CPSF7-218ENST00000537641 PARP10Q53GL7 1025 aa13.79□□□□□ -0.2
CPSF7-218ENST00000537641 HSP90AA4PQ58FG1 418 aa13.79□□□□□ -0.2
CPSF7-218ENST00000537641 BEND6Q5SZJ8 279 aaPredicted RBP13.79□□□□□ -0.2
CPSF7-218ENST00000537641 CRACR2BQ8N4Y2 399 aaPredicted RBP13.79□□□□□ -0.2
CPSF7-218ENST00000537641 LPIN2Q92539 896 aa13.79□□□□□ -0.2
CPSF7-218ENST00000537641 ANKZF1Q9H8Y5 726 aa13.79□□□□□ -0.2
CPSF7-218ENST00000537641 KCNJ14Q9UNX9 436 aa13.79□□□□□ -0.2
CPSF7-218ENST00000537641 PCDHB6Q9Y5E3 794 aa13.79□□□□□ -0.2
CPSF7-218ENST00000537641 RTL9Q8NET4 1388 aa13.79□□□□□ -0.2
CPSF7-218ENST00000537641 LOC102724428A0A0B4J2F2 783 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 CTAGE9A4FU28 777 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 H3BQF6 201 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 FGFR2P21802 821 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 GUCY1A2P33402 732 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 ATP6V1AP38606 617 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 SIK1P57059 783 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 RBL2Q08999 1139 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 TRIM14Q14142 442 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 MFSD6Q6ZSS7 791 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 TMTC1Q8IUR5 882 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 MARCH10Q8NA82 808 aaPredicted RBP13.78□□□□□ -0.2
CPSF7-218ENST00000537641 BBXQ8WY36 941 aaPredicted RBP13.78□□□□□ -0.2
CPSF7-218ENST00000537641 GSDMAQ96QA5 445 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 RNF26Q9BY78 433 aaPredicted RBP13.78□□□□□ -0.2
CPSF7-218ENST00000537641 CSRNP2Q9H175 543 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 PNPLA7Q6ZV29 1317 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 MYH13Q9UKX3 1938 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 ERICH2A1L162 156 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 TEX33O43247 280 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 XBP1P17861 261 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 PHKA1P46020 1223 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 SPAG1Q07617 926 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 MAP3K12Q12852 859 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 SUSD4Q5VX71 490 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 BARGINQ6ZT62 677 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 GRAMD1CQ8IYS0 662 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 FERMT2Q96AC1 680 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 NAPGQ99747 312 aaPredicted RBP13.78□□□□□ -0.2
CPSF7-218ENST00000537641 RNF41Q9H4P4 317 aaPredicted RBP13.78□□□□□ -0.2
CPSF7-218ENST00000537641 ADAM21Q9UKJ8 722 aa13.78□□□□□ -0.2
CPSF7-218ENST00000537641 CASZ1Q86V15 1759 aa13.77□□□□□ -0.2
CPSF7-218ENST00000537641 TRIM75PA6NK02 468 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms