RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 CABP5Q9NP86 173 aa16.13■□□□□ 0.17
RPAIN-205ENST00000536255 CPA4Q9UI42 421 aa16.13■□□□□ 0.17
RPAIN-205ENST00000536255 BAZ2AQ9UIF9 1905 aaKnown RBP16.12■□□□□ 0.17
RPAIN-205ENST00000536255 C19orf81C9J6K1 198 aa16.12■□□□□ 0.17
RPAIN-205ENST00000536255 USP17L10C9JJH3 530 aa16.12■□□□□ 0.17
RPAIN-205ENST00000536255 SMIM22K7EJ46 135 aa16.12■□□□□ 0.17
RPAIN-205ENST00000536255 SLC3A2P08195 630 aaKnown RBP16.12■□□□□ 0.17
RPAIN-205ENST00000536255 ALX1Q15699 326 aa16.12■□□□□ 0.17
RPAIN-205ENST00000536255 C16orf86Q6ZW13 317 aa16.12■□□□□ 0.17
RPAIN-205ENST00000536255 OTOP1Q7RTM1 612 aa16.12■□□□□ 0.17
RPAIN-205ENST00000536255 ZNF287Q9HBT7 754 aa16.12■□□□□ 0.17
RPAIN-205ENST00000536255 TMOD4Q9NZQ9 345 aa16.12■□□□□ 0.17
RPAIN-205ENST00000536255 TRIM17Q9Y577 477 aa16.12■□□□□ 0.17
RPAIN-205ENST00000536255 MINDY4BA8MYZ0 360 aa16.11■□□□□ 0.17
RPAIN-205ENST00000536255 MPHOSPH10O00566 681 aaKnown RBP16.11■□□□□ 0.17
RPAIN-205ENST00000536255 HSPD1P10809 573 aaKnown RBP16.11■□□□□ 0.17
RPAIN-205ENST00000536255 CDK8P49336 464 aa16.11■□□□□ 0.17
RPAIN-205ENST00000536255 LACTBP83111 547 aaPredicted RBP16.11■□□□□ 0.17
RPAIN-205ENST00000536255 PABPC4Q13310 644 aaKnown RBP eCLIP16.11■□□□□ 0.171e-6■■■■□ 26.3
RPAIN-205ENST00000536255 SMCR8Q8TEV9 937 aaPredicted RBP16.11■□□□□ 0.17
RPAIN-205ENST00000536255 EFCC1Q9HA90 598 aa16.11■□□□□ 0.17
RPAIN-205ENST00000536255 PNMA3Q9UL41 463 aa16.11■□□□□ 0.17
RPAIN-205ENST00000536255 ZMYM6O95789 1325 aa16.11■□□□□ 0.17
RPAIN-205ENST00000536255 ROBO3Q96MS0 1386 aa16.11■□□□□ 0.17
RPAIN-205ENST00000536255 BCRP11274 1271 aa16.1■□□□□ 0.17
RPAIN-205ENST00000536255 GUCY1A2P33402 732 aa16.1■□□□□ 0.17
RPAIN-205ENST00000536255 CAP1Q01518 475 aa16.1■□□□□ 0.17
RPAIN-205ENST00000536255 KIF22Q14807 665 aa16.1■□□□□ 0.17
RPAIN-205ENST00000536255 SEPT2Q15019 361 aa16.1■□□□□ 0.17
RPAIN-205ENST00000536255 ARHGEF6Q15052 776 aa16.1■□□□□ 0.17
RPAIN-205ENST00000536255 VPS53Q5VIR6 699 aa16.1■□□□□ 0.17
RPAIN-205ENST00000536255 FBXO46Q6PJ61 603 aaPredicted RBP16.1■□□□□ 0.17
RPAIN-205ENST00000536255 TMEM179Q6ZVK1 233 aa16.1■□□□□ 0.17
RPAIN-205ENST00000536255 FEZ1Q99689 392 aa16.1■□□□□ 0.17
RPAIN-205ENST00000536255 DSCC1Q9BVC3 393 aa16.1■□□□□ 0.17
RPAIN-205ENST00000536255 CDC45O75419 566 aa16.09■□□□□ 0.17
RPAIN-205ENST00000536255 PDE4BQ07343 736 aa16.09■□□□□ 0.17
RPAIN-205ENST00000536255 PPARAQ07869 468 aa16.09■□□□□ 0.17
RPAIN-205ENST00000536255 USP17L2Q6R6M4 530 aa16.09■□□□□ 0.17
RPAIN-205ENST00000536255 CCDC17Q96LX7 622 aa16.09■□□□□ 0.17
RPAIN-205ENST00000536255 KIAA1683Q9H0B3 1180 aa16.09■□□□□ 0.17
RPAIN-205ENST00000536255 EMILIN3Q9NT22 766 aa16.09■□□□□ 0.17
RPAIN-205ENST00000536255 HPS5Q9UPZ3 1129 aa16.09■□□□□ 0.17
RPAIN-205ENST00000536255 FOXP2O15409 715 aa16.08■□□□□ 0.16
RPAIN-205ENST00000536255 SGSM2O43147 1006 aa16.08■□□□□ 0.16
RPAIN-205ENST00000536255 FGAP02671 866 aa16.08■□□□□ 0.16
RPAIN-205ENST00000536255 AKR1B1P15121 316 aa16.08■□□□□ 0.16
RPAIN-205ENST00000536255 OSBPP22059 807 aa16.08■□□□□ 0.16
RPAIN-205ENST00000536255 USP14P54578 494 aa16.08■□□□□ 0.16
RPAIN-205ENST00000536255 ZYXQ15942 572 aaKnown RBP16.08■□□□□ 0.16
RPAIN-205ENST00000536255 ACER1Q8TDN7 264 aa16.08■□□□□ 0.16
RPAIN-205ENST00000536255 C12orf42Q96LP6 360 aa16.08■□□□□ 0.16
RPAIN-205ENST00000536255 ARHGAP39Q9C0H5 1083 aa16.08■□□□□ 0.16
RPAIN-205ENST00000536255 ASCC2Q9H1I8 757 aaPredicted RBP16.08■□□□□ 0.16
RPAIN-205ENST00000536255 MKNK2Q9HBH9 465 aa16.08■□□□□ 0.16
RPAIN-205ENST00000536255 CTNNA3Q9UI47 895 aa16.08■□□□□ 0.16
RPAIN-205ENST00000536255 PTPN22Q9Y2R2 807 aa16.08■□□□□ 0.16
RPAIN-205ENST00000536255 CCDC85CA6NKD9 419 aa16.07■□□□□ 0.16
RPAIN-205ENST00000536255 HOXA7P31268 230 aaPredicted RBP16.07■□□□□ 0.16
RPAIN-205ENST00000536255 IRX3P78415 501 aaPredicted RBP16.07■□□□□ 0.16
RPAIN-205ENST00000536255 KIAA1211Q6ZU35 1233 aa16.07■□□□□ 0.16
RPAIN-205ENST00000536255 HTTP42858 3142 aa16.06■□□□□ 0.16
RPAIN-205ENST00000536255 GNRH1P01148 92 aa16.06■□□□□ 0.16
RPAIN-205ENST00000536255 PSMC4P43686 418 aa16.06■□□□□ 0.16
RPAIN-205ENST00000536255 GCLCP48506 637 aaPredicted RBP16.06■□□□□ 0.16
RPAIN-205ENST00000536255 TRIM47Q96LD4 638 aa16.06■□□□□ 0.16
RPAIN-205ENST00000536255 ANAPC4Q9UJX5 808 aa16.06■□□□□ 0.16
RPAIN-205ENST00000536255 MYH8P13535 1937 aa16.06■□□□□ 0.16
RPAIN-205ENST00000536255 A0A1W2PRG0 241 aa16.05■□□□□ 0.16
RPAIN-205ENST00000536255 ECM2O94769 699 aaPredicted RBP16.05■□□□□ 0.16
RPAIN-205ENST00000536255 PCP11498 1178 aaKnown RBP16.05■□□□□ 0.16
RPAIN-205ENST00000536255 VCAM1P19320 739 aa16.05■□□□□ 0.16
RPAIN-205ENST00000536255 RASA1P20936 1047 aa16.05■□□□□ 0.16
RPAIN-205ENST00000536255 CTGFP29279 349 aa16.05■□□□□ 0.16
RPAIN-205ENST00000536255 ICA1Q05084 483 aa16.05■□□□□ 0.16
RPAIN-205ENST00000536255 IMMTQ16891 758 aaKnown RBP16.05■□□□□ 0.16
RPAIN-205ENST00000536255 FAM110CQ1W6H9 321 aa16.05■□□□□ 0.16
RPAIN-205ENST00000536255 CLEC10AQ8IUN9 316 aa16.05■□□□□ 0.16
RPAIN-205ENST00000536255 ZNF444Q8N0Y2 327 aaPredicted RBP16.05■□□□□ 0.16
RPAIN-205ENST00000536255 STK11IPQ8N1F8 1099 aa16.05■□□□□ 0.16
RPAIN-205ENST00000536255 ANKRD13CQ8N6S4 541 aa16.05■□□□□ 0.16
RPAIN-205ENST00000536255 ESYT1Q9BSJ8 1104 aa16.05■□□□□ 0.16
RPAIN-205ENST00000536255 IL25Q9H293 177 aa16.05■□□□□ 0.16
RPAIN-205ENST00000536255 ZSWIM8A7E2V4 1837 aa16.05■□□□□ 0.16
RPAIN-205ENST00000536255 ZNF213O14771 459 aa16.04■□□□□ 0.16
RPAIN-205ENST00000536255 FMNL1O95466 1100 aaPredicted RBP16.04■□□□□ 0.16
RPAIN-205ENST00000536255 FCGRTP55899 365 aa16.04■□□□□ 0.16
RPAIN-205ENST00000536255 HERVK_113P62684 666 aa16.04■□□□□ 0.16
RPAIN-205ENST00000536255 SIAH1Q8IUQ4 282 aa16.04■□□□□ 0.16
RPAIN-205ENST00000536255 RNF41Q9H4P4 317 aaPredicted RBP16.04■□□□□ 0.16
RPAIN-205ENST00000536255 SH2D4AQ9H788 454 aa16.04■□□□□ 0.16
RPAIN-205ENST00000536255 KANSL2Q9H9L4 492 aa16.04■□□□□ 0.16
RPAIN-205ENST00000536255 ARHGEF10LQ9HCE6 1279 aa16.04■□□□□ 0.16
RPAIN-205ENST00000536255 USP17L15C9J2P7 530 aa16.03■□□□□ 0.16
RPAIN-205ENST00000536255 USP17L13C9JLJ4 530 aa16.03■□□□□ 0.16
RPAIN-205ENST00000536255 USP17L11C9JVI0 530 aa16.03■□□□□ 0.16
RPAIN-205ENST00000536255 USP17L18D6R9N7 530 aa16.03■□□□□ 0.16
RPAIN-205ENST00000536255 USP17L22D6RA61 530 aa16.03■□□□□ 0.16
RPAIN-205ENST00000536255 USP17L17D6RBQ6 530 aa16.03■□□□□ 0.16
RPAIN-205ENST00000536255 USP17L19D6RCP7 530 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms