RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 TAF6LQ9Y6J9 622 aa18.39■□□□□ 0.53
CTTN-215ENST00000533931 ZHX2Q9Y6X8 837 aa18.39■□□□□ 0.53
CTTN-215ENST00000533931 MYH8P13535 1937 aa18.39■□□□□ 0.53
CTTN-215ENST00000533931 ATAD5Q96QE3 1844 aa18.38■□□□□ 0.53
CTTN-215ENST00000533931 FAM155AB1AL88 458 aaPredicted RBP18.38■□□□□ 0.53
CTTN-215ENST00000533931 B4E1Z4 1266 aa18.38■□□□□ 0.53
CTTN-215ENST00000533931 KDM4AO75164 1064 aa18.38■□□□□ 0.53
CTTN-215ENST00000533931 PSMA5P28066 241 aa18.38■□□□□ 0.53
CTTN-215ENST00000533931 NOGQ13253 232 aa18.38■□□□□ 0.53
CTTN-215ENST00000533931 SEPT2Q15019 361 aa18.38■□□□□ 0.53
CTTN-215ENST00000533931 RAB3GAP1Q15042 981 aa18.38■□□□□ 0.53
CTTN-215ENST00000533931 RRP12Q5JTH9 1297 aaKnown RBP18.38■□□□□ 0.53
CTTN-215ENST00000533931 MB21D2Q8IYB1 491 aaPredicted RBP18.38■□□□□ 0.53
CTTN-215ENST00000533931 IL27Q8NEV9 243 aa18.38■□□□□ 0.53
CTTN-215ENST00000533931 MKL1Q969V6 931 aa18.38■□□□□ 0.53
CTTN-215ENST00000533931 NEK1Q96PY6 1258 aa18.38■□□□□ 0.53
CTTN-215ENST00000533931 KIAA1683Q9H0B3 1180 aa18.38■□□□□ 0.53
CTTN-215ENST00000533931 ARHGEF10LQ9HCE6 1279 aa18.38■□□□□ 0.53
CTTN-215ENST00000533931 INCENPQ9NQS7 918 aa18.38■□□□□ 0.53
CTTN-215ENST00000533931 MTMR4Q9NYA4 1195 aa18.38■□□□□ 0.53
CTTN-215ENST00000533931 C19orf81C9J6K1 198 aa18.37■□□□□ 0.53
CTTN-215ENST00000533931 TTLL1O95922 423 aa18.37■□□□□ 0.53
CTTN-215ENST00000533931 MCM5P33992 734 aa18.37■□□□□ 0.53
CTTN-215ENST00000533931 GTF2A2P52657 109 aa18.37■□□□□ 0.53
CTTN-215ENST00000533931 SH3D19Q5HYK7 790 aa18.37■□□□□ 0.53
CTTN-215ENST00000533931 DGKHQ86XP1 1220 aa18.37■□□□□ 0.53
CTTN-215ENST00000533931 ANKS1AQ92625 1134 aa18.37■□□□□ 0.53
CTTN-215ENST00000533931 OTUD5Q96G74 571 aa18.37■□□□□ 0.53
CTTN-215ENST00000533931 ZSWIM5Q9P217 1185 aa18.37■□□□□ 0.53
CTTN-215ENST00000533931 TMX2Q9Y320 296 aa18.37■□□□□ 0.53
CTTN-215ENST00000533931 MANSC4A6NHS7 340 aaPredicted RBP18.36■□□□□ 0.53
CTTN-215ENST00000533931 RBM25P49756 843 aaKnown RBP18.36■□□□□ 0.53
CTTN-215ENST00000533931 USP14P54578 494 aa18.36■□□□□ 0.53
CTTN-215ENST00000533931 INHBEP58166 350 aa18.36■□□□□ 0.53
CTTN-215ENST00000533931 SNAPC2Q13487 334 aa18.36■□□□□ 0.53
CTTN-215ENST00000533931 SART3Q15020 963 aaKnown RBP18.36■□□□□ 0.53
CTTN-215ENST00000533931 SHROOM1Q2M3G4 852 aaPredicted RBP18.36■□□□□ 0.53
CTTN-215ENST00000533931 FAM47AQ5JRC9 791 aa18.36■□□□□ 0.53
CTTN-215ENST00000533931 CEP95Q96GE4 821 aa18.36■□□□□ 0.53
CTTN-215ENST00000533931 CAPNS2Q96L46 248 aa18.36■□□□□ 0.53
CTTN-215ENST00000533931 UBAC1Q9BSL1 405 aa18.36■□□□□ 0.53
CTTN-215ENST00000533931 IL17RBQ9NRM6 502 aa18.36■□□□□ 0.53
CTTN-215ENST00000533931 THSD7BQ9C0I4 1608 aa18.35■□□□□ 0.53
CTTN-215ENST00000533931 A0A0G2JLL6 359 aaPredicted RBP18.35■□□□□ 0.53
CTTN-215ENST00000533931 TESPA1A2RU30 521 aaPredicted RBP18.35■□□□□ 0.53
CTTN-215ENST00000533931 USP17L10C9JJH3 530 aa18.35■□□□□ 0.53
CTTN-215ENST00000533931 IRF6O14896 467 aa18.35■□□□□ 0.53
CTTN-215ENST00000533931 GJA5P36382 358 aa18.35■□□□□ 0.53
CTTN-215ENST00000533931 MAP2K2P36507 400 aa18.35■□□□□ 0.53
CTTN-215ENST00000533931 BACE1P56817 501 aa18.35■□□□□ 0.53
CTTN-215ENST00000533931 PRRT2Q7Z6L0 340 aaPredicted RBP18.35■□□□□ 0.53
CTTN-215ENST00000533931 SIAH1Q8IUQ4 282 aa18.35■□□□□ 0.53
CTTN-215ENST00000533931 TMEM87BQ96K49 555 aa18.35■□□□□ 0.53
CTTN-215ENST00000533931 C12orf42Q96LP6 360 aa18.35■□□□□ 0.53
CTTN-215ENST00000533931 ZSCAN10Q96SZ4 725 aaPredicted RBP18.35■□□□□ 0.53
CTTN-215ENST00000533931 CETPP11597 493 aa18.34■□□□□ 0.53
CTTN-215ENST00000533931 EEF2P13639 858 aaKnown RBP18.34■□□□□ 0.53
CTTN-215ENST00000533931 SREBF2Q12772 1141 aa18.34■□□□□ 0.53
CTTN-215ENST00000533931 SPP2Q13103 211 aa18.34■□□□□ 0.53
CTTN-215ENST00000533931 DHX32Q7L7V1 743 aaKnown RBP18.34■□□□□ 0.53
CTTN-215ENST00000533931 FASTKD5Q7L8L6 764 aaKnown RBP18.34■□□□□ 0.53
CTTN-215ENST00000533931 FBXL16Q8N461 479 aa18.34■□□□□ 0.53
CTTN-215ENST00000533931 PROCA1Q8NCQ7 364 aaPredicted RBP18.34■□□□□ 0.53
CTTN-215ENST00000533931 CNKSR2Q8WXI2 1034 aa18.34■□□□□ 0.53
CTTN-215ENST00000533931 LPAR1Q92633 364 aa18.34■□□□□ 0.53
CTTN-215ENST00000533931 C22orf23Q9BZE7 217 aa18.34■□□□□ 0.53
CTTN-215ENST00000533931 ZCCHC17Q9NP64 241 aaKnown RBP18.34■□□□□ 0.53
CTTN-215ENST00000533931 PHIPQ8WWQ0 1821 aa18.34■□□□□ 0.53
CTTN-215ENST00000533931 TNKSO95271 1327 aa18.33■□□□□ 0.53
CTTN-215ENST00000533931 WDR33Q9C0J8 1336 aaKnown RBP18.33■□□□□ 0.53
CTTN-215ENST00000533931 ERICH2A1L162 156 aa18.33■□□□□ 0.52
CTTN-215ENST00000533931 TOP1P11387 765 aaKnown RBP18.33■□□□□ 0.52
CTTN-215ENST00000533931 EXOSC10Q01780 885 aaKnown RBP18.33■□□□□ 0.52
CTTN-215ENST00000533931 ADCK5Q3MIX3 580 aa18.33■□□□□ 0.52
CTTN-215ENST00000533931 RCSD1Q6JBY9 416 aa18.33■□□□□ 0.52
CTTN-215ENST00000533931 CYP4F22Q6NT55 531 aa18.33■□□□□ 0.52
CTTN-215ENST00000533931 BLOC1S2Q6QNY1 142 aa18.33■□□□□ 0.52
CTTN-215ENST00000533931 USP17L2Q6R6M4 530 aa18.33■□□□□ 0.52
CTTN-215ENST00000533931 CYB5R4Q7L1T6 521 aa18.33■□□□□ 0.52
CTTN-215ENST00000533931 TMTC2Q8N394 836 aa18.33■□□□□ 0.52
CTTN-215ENST00000533931 GMCL1P1Q8NEA9 526 aa18.33■□□□□ 0.52
CTTN-215ENST00000533931 MS4A4AQ96JQ5 239 aa18.33■□□□□ 0.52
CTTN-215ENST00000533931 JAKMIP1Q96N16 626 aaKnown RBP18.33■□□□□ 0.52
CTTN-215ENST00000533931 FEZ1Q99689 392 aa18.33■□□□□ 0.52
CTTN-215ENST00000533931 ZSWIM6Q9HCJ5 1215 aa18.33■□□□□ 0.52
CTTN-215ENST00000533931 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.33■□□□□ 0.52
CTTN-215ENST00000533931 STX8Q9UNK0 236 aa18.33■□□□□ 0.52
CTTN-215ENST00000533931 A0A1W2PRG0 241 aa18.32■□□□□ 0.52
CTTN-215ENST00000533931 TRIM75PA6NK02 468 aa18.32■□□□□ 0.52
CTTN-215ENST00000533931 PRC1O43663 620 aa18.32■□□□□ 0.52
CTTN-215ENST00000533931 LIFRP42702 1097 aa18.32■□□□□ 0.52
CTTN-215ENST00000533931 ANTXR2P58335 489 aa18.32■□□□□ 0.52
CTTN-215ENST00000533931 SEC23AQ15436 765 aa18.32■□□□□ 0.52
CTTN-215ENST00000533931 PAXIP1Q6ZW49 1069 aaPredicted RBP18.32■□□□□ 0.52
CTTN-215ENST00000533931 ENAHQ8N8S7 591 aaPredicted RBP18.32■□□□□ 0.52
CTTN-215ENST00000533931 ACER1Q8TDN7 264 aa18.32■□□□□ 0.52
CTTN-215ENST00000533931 VCPKMTQ9H867 229 aa18.32■□□□□ 0.52
CTTN-215ENST00000533931 GOPCQ9HD26 462 aa18.32■□□□□ 0.52
CTTN-215ENST00000533931 SLC45A1Q9Y2W3 748 aa18.32■□□□□ 0.52
CTTN-215ENST00000533931 VEGFBP49765 207 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms