RNA–Protein interactions for RNA: ENST00000532884.1

PUF60-220, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5

Gene PUF60, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-220ENST00000532884 MKNK2Q9HBH9 465 aa17.28■□□□□ 0.36
PUF60-220ENST00000532884 EMILIN3Q9NT22 766 aa17.28■□□□□ 0.36
PUF60-220ENST00000532884 PNMA3Q9UL41 463 aa17.28■□□□□ 0.36
PUF60-220ENST00000532884 A0A0D9SFI3 127 aa17.27■□□□□ 0.36
PUF60-220ENST00000532884 FMNL1O95466 1100 aaPredicted RBP17.27■□□□□ 0.36
PUF60-220ENST00000532884 IRX3P78415 501 aaPredicted RBP17.27■□□□□ 0.36
PUF60-220ENST00000532884 ATP2B2Q01814 1243 aa17.27■□□□□ 0.36
PUF60-220ENST00000532884 ARHGEF6Q15052 776 aa17.27■□□□□ 0.36
PUF60-220ENST00000532884 MCMDC2Q4G0Z9 681 aa17.27■□□□□ 0.36
PUF60-220ENST00000532884 VPS53Q5VIR6 699 aa17.27■□□□□ 0.36
PUF60-220ENST00000532884 FBXO46Q6PJ61 603 aaPredicted RBP17.27■□□□□ 0.36
PUF60-220ENST00000532884 TMEM179Q6ZVK1 233 aa17.27■□□□□ 0.36
PUF60-220ENST00000532884 ANKRD13CQ8N6S4 541 aa17.27■□□□□ 0.36
PUF60-220ENST00000532884 CCDC17Q96LX7 622 aa17.27■□□□□ 0.36
PUF60-220ENST00000532884 ASCC2Q9H1I8 757 aaPredicted RBP17.27■□□□□ 0.36
PUF60-220ENST00000532884 HELLSQ9NRZ9 838 aa17.27■□□□□ 0.36
PUF60-220ENST00000532884 HPS5Q9UPZ3 1129 aa17.27■□□□□ 0.36
PUF60-220ENST00000532884 ADGRA2Q96PE1 1338 aa17.26■□□□□ 0.35
PUF60-220ENST00000532884 SDSP20132 328 aa17.26■□□□□ 0.35
PUF60-220ENST00000532884 PSMC4P43686 418 aa17.26■□□□□ 0.35
PUF60-220ENST00000532884 A0A1W2PRG0 241 aa17.25■□□□□ 0.35
PUF60-220ENST00000532884 PRDM1O75626 825 aa17.25■□□□□ 0.35
PUF60-220ENST00000532884 BCRP11274 1271 aa17.25■□□□□ 0.35
PUF60-220ENST00000532884 USP14P54578 494 aa17.25■□□□□ 0.35
PUF60-220ENST00000532884 P2RX7Q99572 595 aaKnown RBP17.25■□□□□ 0.35
PUF60-220ENST00000532884 KIAA1683Q9H0B3 1180 aa17.25■□□□□ 0.35
PUF60-220ENST00000532884 DIAPH3Q9NSV4 1193 aa17.25■□□□□ 0.35
PUF60-220ENST00000532884 TAOK2Q9UL54 1235 aa17.25■□□□□ 0.35
PUF60-220ENST00000532884 PTPN22Q9Y2R2 807 aa17.25■□□□□ 0.35
PUF60-220ENST00000532884 PTPRFP10586 1907 aa17.24■□□□□ 0.35
PUF60-220ENST00000532884 CTGFP29279 349 aa17.24■□□□□ 0.35
PUF60-220ENST00000532884 ICA1Q05084 483 aa17.24■□□□□ 0.35
PUF60-220ENST00000532884 CWC27Q6UX04 472 aaKnown RBP17.24■□□□□ 0.35
PUF60-220ENST00000532884 ZNF444Q8N0Y2 327 aaPredicted RBP17.24■□□□□ 0.35
PUF60-220ENST00000532884 TRIM47Q96LD4 638 aa17.24■□□□□ 0.35
PUF60-220ENST00000532884 FOXP2O15409 715 aa17.23■□□□□ 0.35
PUF60-220ENST00000532884 RAD21O60216 631 aa17.23■□□□□ 0.35
PUF60-220ENST00000532884 PEX10O60683 326 aa17.23■□□□□ 0.35
PUF60-220ENST00000532884 SLC3A2P08195 630 aaKnown RBP17.23■□□□□ 0.35
PUF60-220ENST00000532884 RASA1P20936 1047 aa17.23■□□□□ 0.35
PUF60-220ENST00000532884 HOXA7P31268 230 aaPredicted RBP17.23■□□□□ 0.35
PUF60-220ENST00000532884 PPARAQ07869 468 aa17.23■□□□□ 0.35
PUF60-220ENST00000532884 ZNF589Q86UQ0 364 aaPredicted RBP17.23■□□□□ 0.35
PUF60-220ENST00000532884 SIAH1Q8IUQ4 282 aa17.23■□□□□ 0.35
PUF60-220ENST00000532884 ZNF287Q9HBT7 754 aa17.23■□□□□ 0.35
PUF60-220ENST00000532884 ARHGEF10LQ9HCE6 1279 aa17.23■□□□□ 0.35
PUF60-220ENST00000532884 USP17L15C9J2P7 530 aa17.22■□□□□ 0.35
PUF60-220ENST00000532884 USP17L13C9JLJ4 530 aa17.22■□□□□ 0.35
PUF60-220ENST00000532884 USP17L11C9JVI0 530 aa17.22■□□□□ 0.35
PUF60-220ENST00000532884 USP17L18D6R9N7 530 aa17.22■□□□□ 0.35
PUF60-220ENST00000532884 USP17L22D6RA61 530 aa17.22■□□□□ 0.35
PUF60-220ENST00000532884 USP17L17D6RBQ6 530 aa17.22■□□□□ 0.35
PUF60-220ENST00000532884 USP17L19D6RCP7 530 aa17.22■□□□□ 0.35
PUF60-220ENST00000532884 USP17L20D6RJB6 530 aa17.22■□□□□ 0.35
PUF60-220ENST00000532884 EEF2P13639 858 aaKnown RBP17.22■□□□□ 0.35
PUF60-220ENST00000532884 VCAM1P19320 739 aa17.22■□□□□ 0.35
PUF60-220ENST00000532884 GCLCP48506 637 aaPredicted RBP17.22■□□□□ 0.35
PUF60-220ENST00000532884 FCGRTP55899 365 aa17.22■□□□□ 0.35
PUF60-220ENST00000532884 CTDSPL2Q05D32 466 aa17.22■□□□□ 0.35
PUF60-220ENST00000532884 USP17L24Q0WX57 530 aa17.22■□□□□ 0.35
PUF60-220ENST00000532884 TTC22Q5TAA0 569 aa17.22■□□□□ 0.35
PUF60-220ENST00000532884 TICAM2Q86XR7 235 aa17.22■□□□□ 0.35
PUF60-220ENST00000532884 SPICE1Q8N0Z3 855 aa17.22■□□□□ 0.35
PUF60-220ENST00000532884 RPAP3Q9H6T3 665 aaPredicted RBP17.22■□□□□ 0.35
PUF60-220ENST00000532884 KANSL2Q9H9L4 492 aa17.22■□□□□ 0.35
PUF60-220ENST00000532884 INCENPQ9NQS7 918 aa17.22■□□□□ 0.35
PUF60-220ENST00000532884 PTCH2Q9Y6C5 1203 aa17.22■□□□□ 0.35
PUF60-220ENST00000532884 CCDC171Q6TFL3 1326 aa17.21■□□□□ 0.35
PUF60-220ENST00000532884 GSPT1P15170 499 aaKnown RBP17.21■□□□□ 0.35
PUF60-220ENST00000532884 HERVK_113P62684 666 aa17.21■□□□□ 0.35
PUF60-220ENST00000532884 PDE4BQ07343 736 aa17.21■□□□□ 0.35
PUF60-220ENST00000532884 SAMD1Q6SPF0 538 aaPredicted RBP17.21■□□□□ 0.35
PUF60-220ENST00000532884 C12orf42Q96LP6 360 aa17.21■□□□□ 0.35
PUF60-220ENST00000532884 PAGR1Q9BTK6 254 aa17.21■□□□□ 0.35
PUF60-220ENST00000532884 TANGO6Q9C0B7 1094 aa17.21■□□□□ 0.35
PUF60-220ENST00000532884 LOC285556D6RIA3 1793 aa17.2■□□□□ 0.34
PUF60-220ENST00000532884 ROBO3Q96MS0 1386 aa17.2■□□□□ 0.34
PUF60-220ENST00000532884 HIP1O00291 1037 aa17.2■□□□□ 0.34
PUF60-220ENST00000532884 TNPO2O14787 897 aaKnown RBP17.2■□□□□ 0.34
PUF60-220ENST00000532884 MYCP01106 439 aaPredicted RBP17.2■□□□□ 0.34
PUF60-220ENST00000532884 FGAP02671 866 aa17.2■□□□□ 0.34
PUF60-220ENST00000532884 HSPD1P10809 573 aaKnown RBP17.2■□□□□ 0.34
PUF60-220ENST00000532884 HOXD10P28358 340 aa17.2■□□□□ 0.34
PUF60-220ENST00000532884 MFAP1P55081 439 aaKnown RBP17.2■□□□□ 0.34
PUF60-220ENST00000532884 SOX10P56693 466 aa17.2■□□□□ 0.34
PUF60-220ENST00000532884 FAM47AQ5JRC9 791 aa17.2■□□□□ 0.34
PUF60-220ENST00000532884 KIAA1755Q5JYT7 1200 aa17.2■□□□□ 0.34
PUF60-220ENST00000532884 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.2■□□□□ 0.34
PUF60-220ENST00000532884 SH2D4AQ9H788 454 aa17.2■□□□□ 0.34
PUF60-220ENST00000532884 TMX2Q9Y320 296 aa17.2■□□□□ 0.34
PUF60-220ENST00000532884 GNRH1P01148 92 aa17.19■□□□□ 0.34
PUF60-220ENST00000532884 NEFLP07196 543 aa17.19■□□□□ 0.34
PUF60-220ENST00000532884 HAND2P61296 217 aa17.19■□□□□ 0.34
PUF60-220ENST00000532884 FAM110CQ1W6H9 321 aa17.19■□□□□ 0.34
PUF60-220ENST00000532884 CATSPERGQ6ZRH7 1159 aa17.19■□□□□ 0.34
PUF60-220ENST00000532884 SKAP1Q86WV1 359 aa17.19■□□□□ 0.34
PUF60-220ENST00000532884 RAET1EQ8TD07 263 aa17.19■□□□□ 0.34
PUF60-220ENST00000532884 TXNRD2Q9NNW7 524 aa17.19■□□□□ 0.34
PUF60-220ENST00000532884 TOMM22Q9NS69 142 aa17.19■□□□□ 0.34
PUF60-220ENST00000532884 RBPJLQ9UBG7 517 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms