RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 NAA16Q6N069 864 aaPredicted RBP11.3□□□□□ -0.6
CHMP4A-205ENST00000531158 GPRC5AQ8NFJ5 357 aa11.3□□□□□ -0.6
CHMP4A-205ENST00000531158 NUDT12Q9BQG2 462 aa11.3□□□□□ -0.6
CHMP4A-205ENST00000531158 SAP30BPQ9UHR5 308 aaKnown RBP11.3□□□□□ -0.6
CHMP4A-205ENST00000531158 FPGT-TNNI3KV9GXZ4 949 aa11.3□□□□□ -0.6
CHMP4A-205ENST00000531158 MYH7P12883 1935 aa11.3□□□□□ -0.6
CHMP4A-205ENST00000531158 C19orf81C9J6K1 198 aa11.29□□□□□ -0.6
CHMP4A-205ENST00000531158 USP17L10C9JJH3 530 aa11.29□□□□□ -0.6
CHMP4A-205ENST00000531158 GNAI2P04899 355 aa11.29□□□□□ -0.6
CHMP4A-205ENST00000531158 ZAP70P43403 619 aa11.29□□□□□ -0.6
CHMP4A-205ENST00000531158 EVX2Q03828 476 aa11.29□□□□□ -0.6
CHMP4A-205ENST00000531158 SOCS4Q8WXH5 440 aa11.29□□□□□ -0.6
CHMP4A-205ENST00000531158 CLUAP1Q96AJ1 413 aa11.29□□□□□ -0.6
CHMP4A-205ENST00000531158 TMOD4Q9NZQ9 345 aa11.29□□□□□ -0.6
CHMP4A-205ENST00000531158 DBNLQ9UJU6 430 aaKnown RBP11.29□□□□□ -0.6
CHMP4A-205ENST00000531158 NDUFB9Q9Y6M9 179 aa11.29□□□□□ -0.6
CHMP4A-205ENST00000531158 GH2P01242 217 aa11.28□□□□□ -0.6
CHMP4A-205ENST00000531158 IGHA2P01877 340 aa11.28□□□□□ -0.6
CHMP4A-205ENST00000531158 ZKSCAN1P17029 563 aaPredicted RBP11.28□□□□□ -0.6
CHMP4A-205ENST00000531158 MAPK4P31152 587 aa11.28□□□□□ -0.6
CHMP4A-205ENST00000531158 G3BP1Q13283 466 aaKnown RBP eCLIP11.28□□□□□ -0.6
CHMP4A-205ENST00000531158 TATDN1Q6P1N9 297 aa11.28□□□□□ -0.6
CHMP4A-205ENST00000531158 ATF7IPQ6VMQ6 1270 aa11.28□□□□□ -0.6
CHMP4A-205ENST00000531158 FOXP4Q8IVH2 680 aaPredicted RBP11.28□□□□□ -0.6
CHMP4A-205ENST00000531158 SSH3Q8TE77 659 aa11.28□□□□□ -0.6
CHMP4A-205ENST00000531158 ZNF512BQ96KM6 892 aaPredicted RBP11.28□□□□□ -0.6
CHMP4A-205ENST00000531158 C12orf42Q96LP6 360 aa11.28□□□□□ -0.6
CHMP4A-205ENST00000531158 APBA2Q99767 749 aa11.28□□□□□ -0.6
CHMP4A-205ENST00000531158 PAGR1Q9BTK6 254 aa11.28□□□□□ -0.6
CHMP4A-205ENST00000531158 GPR108Q9NPR9 543 aa11.28□□□□□ -0.6
CHMP4A-205ENST00000531158 BAG3O95817 575 aa11.27□□□□□ -0.61
CHMP4A-205ENST00000531158 RGS2P41220 211 aa11.27□□□□□ -0.61
CHMP4A-205ENST00000531158 MDM2Q00987 491 aaPredicted RBP11.27□□□□□ -0.61
CHMP4A-205ENST00000531158 ZYXQ15942 572 aaKnown RBP11.27□□□□□ -0.61
CHMP4A-205ENST00000531158 TTC39AQ5SRH9 613 aa11.27□□□□□ -0.61
CHMP4A-205ENST00000531158 PLEKHH3Q7Z736 793 aa11.27□□□□□ -0.61
CHMP4A-205ENST00000531158 CRACR2BQ8N4Y2 399 aaPredicted RBP11.27□□□□□ -0.61
CHMP4A-205ENST00000531158 TMEM57Q8N5G2 664 aa11.27□□□□□ -0.61
CHMP4A-205ENST00000531158 MIGA1Q8NAN2 632 aa11.27□□□□□ -0.61
CHMP4A-205ENST00000531158 TRPV1Q8NER1 839 aa11.27□□□□□ -0.61
CHMP4A-205ENST00000531158 ACER1Q8TDN7 264 aa11.27□□□□□ -0.61
CHMP4A-205ENST00000531158 MYLIPQ8WY64 445 aa11.27□□□□□ -0.61
CHMP4A-205ENST00000531158 C1orf115Q9H7X2 142 aa11.27□□□□□ -0.61
CHMP4A-205ENST00000531158 BTBD7Q9P203 1132 aa11.27□□□□□ -0.61
CHMP4A-205ENST00000531158 PLCG2P16885 1265 aa11.26□□□□□ -0.61
CHMP4A-205ENST00000531158 VCAM1P19320 739 aa11.26□□□□□ -0.61
CHMP4A-205ENST00000531158 GUCY1A2P33402 732 aa11.26□□□□□ -0.61
CHMP4A-205ENST00000531158 MAP2K5Q13163 448 aa11.26□□□□□ -0.61
CHMP4A-205ENST00000531158 PDE3AQ14432 1141 aa11.26□□□□□ -0.61
CHMP4A-205ENST00000531158 USP17L2Q6R6M4 530 aa11.26□□□□□ -0.61
CHMP4A-205ENST00000531158 FRAT1Q92837 279 aaPredicted RBP11.26□□□□□ -0.61
CHMP4A-205ENST00000531158 EAF2Q96CJ1 260 aaPredicted RBP11.26□□□□□ -0.61
CHMP4A-205ENST00000531158 SNX27Q96L92 541 aa11.26□□□□□ -0.61
CHMP4A-205ENST00000531158 NOL10Q9BSC4 688 aaKnown RBP11.26□□□□□ -0.61
CHMP4A-205ENST00000531158 SEMA6BQ9H3T3 888 aa11.26□□□□□ -0.61
CHMP4A-205ENST00000531158 ANTXR1Q9H6X2 564 aa11.26□□□□□ -0.61
CHMP4A-205ENST00000531158 GINM1Q9NU53 330 aa11.26□□□□□ -0.61
CHMP4A-205ENST00000531158 GREB1LQ9C091 1923 aaPredicted RBP11.26□□□□□ -0.61
CHMP4A-205ENST00000531158 SPDYE16A6NNV3 312 aaPredicted RBP11.25□□□□□ -0.61
CHMP4A-205ENST00000531158 FOSL2P15408 326 aa11.25□□□□□ -0.61
CHMP4A-205ENST00000531158 CYP7A1P22680 504 aa11.25□□□□□ -0.61
CHMP4A-205ENST00000531158 SHMT1P34896 483 aa11.25□□□□□ -0.61
CHMP4A-205ENST00000531158 LBX2Q6XYB7 198 aa11.25□□□□□ -0.61
CHMP4A-205ENST00000531158 CATSPERGQ6ZRH7 1159 aa11.25□□□□□ -0.61
CHMP4A-205ENST00000531158 TRMT44Q8IYL2 757 aaKnown RBP11.25□□□□□ -0.61
CHMP4A-205ENST00000531158 PIAS4Q8N2W9 510 aaPredicted RBP11.25□□□□□ -0.61
CHMP4A-205ENST00000531158 NPLOC4Q8TAT6 608 aa11.25□□□□□ -0.61
CHMP4A-205ENST00000531158 CCDC8Q9H0W5 538 aaPredicted RBP11.25□□□□□ -0.61
CHMP4A-205ENST00000531158 RABGAP1Q9Y3P9 1069 aa11.25□□□□□ -0.61
CHMP4A-205ENST00000531158 ZBED9Q6R2W3 1325 aa11.25□□□□□ -0.61
CHMP4A-205ENST00000531158 SYNGAP1Q96PV0 1343 aa11.25□□□□□ -0.61
CHMP4A-205ENST00000531158 MCM3APO60318 1980 aa11.25□□□□□ -0.61
CHMP4A-205ENST00000531158 HOXC6P09630 235 aa11.24□□□□□ -0.61
CHMP4A-205ENST00000531158 PTPREP23469 700 aa11.24□□□□□ -0.61
CHMP4A-205ENST00000531158 CYP2C19P33261 490 aa11.24□□□□□ -0.61
CHMP4A-205ENST00000531158 PLCD1P51178 756 aa11.24□□□□□ -0.61
CHMP4A-205ENST00000531158 ATP8B2P98198 1209 aa11.24□□□□□ -0.61
CHMP4A-205ENST00000531158 HNRNPUQ00839 825 aaKnown RBP eCLIP11.24□□□□□ -0.61
CHMP4A-205ENST00000531158 GRB14Q14449 540 aa11.24□□□□□ -0.61
CHMP4A-205ENST00000531158 CCDC158Q5M9N0 1113 aa11.24□□□□□ -0.61
CHMP4A-205ENST00000531158 RIOK1Q9BRS2 568 aaKnown RBP11.24□□□□□ -0.61
CHMP4A-205ENST00000531158 KIAA1683Q9H0B3 1180 aa11.24□□□□□ -0.61
CHMP4A-205ENST00000531158 EHD4Q9H223 541 aa11.24□□□□□ -0.61
CHMP4A-205ENST00000531158 SERPINB13Q9UIV8 391 aa11.24□□□□□ -0.61
CHMP4A-205ENST00000531158 NOP58Q9Y2X3 529 aaKnown RBP11.24□□□□□ -0.61
CHMP4A-205ENST00000531158 A0A1W2PRG0 241 aa11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 SLC15A5A6NIM6 579 aa11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 USP17L15C9J2P7 530 aa11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 USP17L13C9JLJ4 530 aa11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 USP17L11C9JVI0 530 aa11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 USP17L18D6R9N7 530 aa11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 USP17L22D6RA61 530 aa11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 USP17L17D6RBQ6 530 aa11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 USP17L19D6RCP7 530 aa11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 USP17L20D6RJB6 530 aa11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 SURF6O75683 361 aaKnown RBP11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 IDH1O75874 414 aaKnown RBP11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 HLA-DOAP06340 250 aa11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 RLBP1P12271 317 aa11.23□□□□□ -0.61
CHMP4A-205ENST00000531158 CYBAP13498 195 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms