RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 PLEKHM2Q8IWE5 1019 aa22.76■■□□□ 1.23
UBXN1-211ENST00000531056 ACER1Q8TDN7 264 aa22.76■■□□□ 1.23
UBXN1-211ENST00000531056 KIAA1683Q9H0B3 1180 aa22.76■■□□□ 1.23
UBXN1-211ENST00000531056 AKR1B1P15121 316 aa22.75■■□□□ 1.23
UBXN1-211ENST00000531056 PSMC4P43686 418 aa22.75■■□□□ 1.23
UBXN1-211ENST00000531056 TMEM179Q6ZVK1 233 aa22.75■■□□□ 1.23
UBXN1-211ENST00000531056 OSBPL3Q9H4L5 887 aa22.75■■□□□ 1.23
UBXN1-211ENST00000531056 PTCH2Q9Y6C5 1203 aa22.75■■□□□ 1.23
UBXN1-211ENST00000531056 MPHOSPH10O00566 681 aaKnown RBP22.74■■□□□ 1.23
UBXN1-211ENST00000531056 USP14P54578 494 aa22.74■■□□□ 1.23
UBXN1-211ENST00000531056 FAM110CQ1W6H9 321 aa22.74■■□□□ 1.23
UBXN1-211ENST00000531056 ANKRD13CQ8N6S4 541 aa22.74■■□□□ 1.23
UBXN1-211ENST00000531056 FEZ1Q99689 392 aa22.74■■□□□ 1.23
UBXN1-211ENST00000531056 PATL2C9JE40 543 aaKnown RBP22.73■■□□□ 1.23
UBXN1-211ENST00000531056 ECM2O94769 699 aaPredicted RBP22.73■■□□□ 1.23
UBXN1-211ENST00000531056 GCLCP48506 637 aaPredicted RBP22.73■■□□□ 1.23
UBXN1-211ENST00000531056 RGS19P49795 217 aa22.73■■□□□ 1.23
UBXN1-211ENST00000531056 IRX3P78415 501 aaPredicted RBP22.73■■□□□ 1.23
UBXN1-211ENST00000531056 ZYXQ15942 572 aaKnown RBP22.73■■□□□ 1.23
UBXN1-211ENST00000531056 TICAM2Q86XR7 235 aa22.73■■□□□ 1.23
UBXN1-211ENST00000531056 CCDC17Q96LX7 622 aa22.73■■□□□ 1.23
UBXN1-211ENST00000531056 RBBP6Q7Z6E9 1792 aaKnown RBP22.73■■□□□ 1.23
UBXN1-211ENST00000531056 A0A1W2PRG0 241 aa22.72■■□□□ 1.23
UBXN1-211ENST00000531056 FOXP2O15409 715 aa22.72■■□□□ 1.23
UBXN1-211ENST00000531056 TDO2P48775 406 aa22.72■■□□□ 1.23
UBXN1-211ENST00000531056 PRMT2P55345 433 aa22.72■■□□□ 1.23
UBXN1-211ENST00000531056 FCGRTP55899 365 aa22.72■■□□□ 1.23
UBXN1-211ENST00000531056 SOX10P56693 466 aa22.72■■□□□ 1.23
UBXN1-211ENST00000531056 CCDC129Q6ZRS4 1044 aa22.72■■□□□ 1.23
UBXN1-211ENST00000531056 IFNL3Q8IZI9 196 aa22.72■■□□□ 1.23
UBXN1-211ENST00000531056 ARMC5Q96C12 935 aa22.72■■□□□ 1.23
UBXN1-211ENST00000531056 SRRDQ9UH36 339 aa22.72■■□□□ 1.23
UBXN1-211ENST00000531056 FMNL1O95466 1100 aaPredicted RBP22.71■■□□□ 1.23
UBXN1-211ENST00000531056 VCAM1P19320 739 aa22.71■■□□□ 1.23
UBXN1-211ENST00000531056 CLEC10AQ8IUN9 316 aa22.71■■□□□ 1.23
UBXN1-211ENST00000531056 P2RX7Q99572 595 aaKnown RBP22.71■■□□□ 1.23
UBXN1-211ENST00000531056 MINDY4BA8MYZ0 360 aa22.7■■□□□ 1.22
UBXN1-211ENST00000531056 APPP05067 770 aa22.7■■□□□ 1.22
UBXN1-211ENST00000531056 HERVK_113P62684 666 aa22.7■■□□□ 1.22
UBXN1-211ENST00000531056 SIAH1Q8IUQ4 282 aa22.7■■□□□ 1.22
UBXN1-211ENST00000531056 HELLSQ9NRZ9 838 aa22.7■■□□□ 1.22
UBXN1-211ENST00000531056 MORF4L1Q9UBU8 362 aa22.7■■□□□ 1.22
UBXN1-211ENST00000531056 MYPNQ86TC9 1320 aa22.7■■□□□ 1.22
UBXN1-211ENST00000531056 A0A0D9SFI3 127 aa22.69■■□□□ 1.22
UBXN1-211ENST00000531056 TRIM6-TRIM34B2RNG4 842 aa22.69■■□□□ 1.22
UBXN1-211ENST00000531056 RASA1P20936 1047 aa22.69■■□□□ 1.22
UBXN1-211ENST00000531056 HOXD10P28358 340 aa22.69■■□□□ 1.22
UBXN1-211ENST00000531056 ICA1Q05084 483 aa22.69■■□□□ 1.22
UBXN1-211ENST00000531056 FAM227BQ96M60 508 aa22.69■■□□□ 1.22
UBXN1-211ENST00000531056 NACAP1Q9BZK3 213 aa22.69■■□□□ 1.22
UBXN1-211ENST00000531056 USP17L15C9J2P7 530 aa22.68■■□□□ 1.22
UBXN1-211ENST00000531056 USP17L13C9JLJ4 530 aa22.68■■□□□ 1.22
UBXN1-211ENST00000531056 USP17L11C9JVI0 530 aa22.68■■□□□ 1.22
UBXN1-211ENST00000531056 USP17L18D6R9N7 530 aa22.68■■□□□ 1.22
UBXN1-211ENST00000531056 USP17L22D6RA61 530 aa22.68■■□□□ 1.22
UBXN1-211ENST00000531056 USP17L17D6RBQ6 530 aa22.68■■□□□ 1.22
UBXN1-211ENST00000531056 USP17L19D6RCP7 530 aa22.68■■□□□ 1.22
UBXN1-211ENST00000531056 USP17L20D6RJB6 530 aa22.68■■□□□ 1.22
UBXN1-211ENST00000531056 PDE4AP27815 886 aa22.68■■□□□ 1.22
UBXN1-211ENST00000531056 PRKCZQ05513 592 aa22.68■■□□□ 1.22
UBXN1-211ENST00000531056 USP17L24Q0WX57 530 aa22.68■■□□□ 1.22
UBXN1-211ENST00000531056 SLC9C1Q4G0N8 1177 aa22.68■■□□□ 1.22
UBXN1-211ENST00000531056 POTEEQ6S8J3 1075 aa22.68■■□□□ 1.22
UBXN1-211ENST00000531056 CATSPERGQ6ZRH7 1159 aa22.68■■□□□ 1.22
UBXN1-211ENST00000531056 ZNF333Q96JL9 665 aa22.68■■□□□ 1.22
UBXN1-211ENST00000531056 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.68■■□□□ 1.22
UBXN1-211ENST00000531056 TXNRD2Q9NNW7 524 aa22.68■■□□□ 1.22
UBXN1-211ENST00000531056 RLFQ13129 1914 aa22.68■■□□□ 1.22
UBXN1-211ENST00000531056 PARP14Q460N5 1801 aa22.67■■□□□ 1.22
UBXN1-211ENST00000531056 KIAA1755Q5JYT7 1200 aa22.67■■□□□ 1.22
UBXN1-211ENST00000531056 STK11IPQ8N1F8 1099 aa22.67■■□□□ 1.22
UBXN1-211ENST00000531056 GTF3C2Q8WUA4 911 aaPredicted RBP22.67■■□□□ 1.22
UBXN1-211ENST00000531056 RILPL2Q969X0 211 aa22.67■■□□□ 1.22
UBXN1-211ENST00000531056 NAPBQ9H115 298 aa22.67■■□□□ 1.22
UBXN1-211ENST00000531056 RPAP3Q9H6T3 665 aaPredicted RBP22.67■■□□□ 1.22
UBXN1-211ENST00000531056 ARHGEF10LQ9HCE6 1279 aa22.67■■□□□ 1.22
UBXN1-211ENST00000531056 GABRQQ9UN88 632 aa22.67■■□□□ 1.22
UBXN1-211ENST00000531056 TMX2Q9Y320 296 aa22.67■■□□□ 1.22
UBXN1-211ENST00000531056 A0A0G2JMZ2 1700 aa22.67■■□□□ 1.22
UBXN1-211ENST00000531056 PLXNB2O15031 1838 aa22.66■■□□□ 1.22
UBXN1-211ENST00000531056 CENPFP49454 3210 aa22.66■■□□□ 1.22
UBXN1-211ENST00000531056 DOCK3Q8IZD9 2030 aa22.66■■□□□ 1.22
UBXN1-211ENST00000531056 TNPO2O14787 897 aaKnown RBP22.66■■□□□ 1.22
UBXN1-211ENST00000531056 PEX10O60683 326 aa22.66■■□□□ 1.22
UBXN1-211ENST00000531056 NMIQ13287 307 aaPredicted RBP22.66■■□□□ 1.22
UBXN1-211ENST00000531056 VPS53Q5VIR6 699 aa22.66■■□□□ 1.22
UBXN1-211ENST00000531056 RBPJLQ9UBG7 517 aa22.66■■□□□ 1.22
UBXN1-211ENST00000531056 PPARAQ07869 468 aa22.65■■□□□ 1.22
UBXN1-211ENST00000531056 MCMDC2Q4G0Z9 681 aa22.65■■□□□ 1.22
UBXN1-211ENST00000531056 SH3TC2Q8TF17 1288 aa22.65■■□□□ 1.22
UBXN1-211ENST00000531056 KANSL2Q9H9L4 492 aa22.65■■□□□ 1.22
UBXN1-211ENST00000531056 MKNK2Q9HBH9 465 aa22.65■■□□□ 1.22
UBXN1-211ENST00000531056 EEF2P13639 858 aaKnown RBP22.64■■□□□ 1.21
UBXN1-211ENST00000531056 SDSP20132 328 aa22.64■■□□□ 1.21
UBXN1-211ENST00000531056 LBX2Q6XYB7 198 aa22.64■■□□□ 1.21
UBXN1-211ENST00000531056 NBPF11Q86T75 865 aa22.64■■□□□ 1.21
UBXN1-211ENST00000531056 ZNF589Q86UQ0 364 aaPredicted RBP22.64■■□□□ 1.21
UBXN1-211ENST00000531056 RAET1EQ8TD07 263 aa22.64■■□□□ 1.21
UBXN1-211ENST00000531056 LPAR1Q92633 364 aa22.64■■□□□ 1.21
UBXN1-211ENST00000531056 SH2D4AQ9H788 454 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms