RNA–Protein interactions for RNA: ENST00000531046.1

LINC01016-204, Transcript of long intergenic non-protein coding RNA 1016, humanhuman

TSL 1 (best)

Gene LINC01016, Length 822 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01016-204ENST00000531046 ZSWIM8A7E2V4 1837 aa15.51■□□□□ 0.07
LINC01016-204ENST00000531046 LACTBP83111 547 aaPredicted RBP15.5■□□□□ 0.07
LINC01016-204ENST00000531046 NMIQ13287 307 aaPredicted RBP15.5■□□□□ 0.07
LINC01016-204ENST00000531046 KIF22Q14807 665 aa15.5■□□□□ 0.07
LINC01016-204ENST00000531046 PKN2Q16513 984 aaKnown RBP15.5■□□□□ 0.07
LINC01016-204ENST00000531046 VPS53Q5VIR6 699 aa15.5■□□□□ 0.07
LINC01016-204ENST00000531046 USP17L2Q6R6M4 530 aa15.5■□□□□ 0.07
LINC01016-204ENST00000531046 ASCC2Q9H1I8 757 aaPredicted RBP15.5■□□□□ 0.07
LINC01016-204ENST00000531046 HELLSQ9NRZ9 838 aa15.5■□□□□ 0.07
LINC01016-204ENST00000531046 EMILIN3Q9NT22 766 aa15.5■□□□□ 0.07
LINC01016-204ENST00000531046 FOXP2O15409 715 aa15.49■□□□□ 0.07
LINC01016-204ENST00000531046 BCRP11274 1271 aa15.49■□□□□ 0.07
LINC01016-204ENST00000531046 SDSP20132 328 aa15.49■□□□□ 0.07
LINC01016-204ENST00000531046 OSBPP22059 807 aa15.49■□□□□ 0.07
LINC01016-204ENST00000531046 CTGFP29279 349 aa15.49■□□□□ 0.07
LINC01016-204ENST00000531046 PABPC4Q13310 644 aaKnown RBP eCLIP15.49■□□□□ 0.07
LINC01016-204ENST00000531046 FBXO46Q6PJ61 603 aaPredicted RBP15.49■□□□□ 0.07
LINC01016-204ENST00000531046 TMEM179Q6ZVK1 233 aa15.49■□□□□ 0.07
LINC01016-204ENST00000531046 NACAP1Q9BZK3 213 aa15.49■□□□□ 0.07
LINC01016-204ENST00000531046 NAPBQ9H115 298 aa15.49■□□□□ 0.07
LINC01016-204ENST00000531046 PNMA3Q9UL41 463 aa15.49■□□□□ 0.07
LINC01016-204ENST00000531046 HPS5Q9UPZ3 1129 aa15.49■□□□□ 0.07
LINC01016-204ENST00000531046 BRCA2P51587 3418 aa15.48■□□□□ 0.07
LINC01016-204ENST00000531046 A0A1W2PRG0 241 aa15.48■□□□□ 0.07
LINC01016-204ENST00000531046 PSMC4P43686 418 aa15.48■□□□□ 0.07
LINC01016-204ENST00000531046 IRX3P78415 501 aaPredicted RBP15.48■□□□□ 0.07
LINC01016-204ENST00000531046 MCMDC2Q4G0Z9 681 aa15.48■□□□□ 0.07
LINC01016-204ENST00000531046 ZNF589Q86UQ0 364 aaPredicted RBP15.48■□□□□ 0.07
LINC01016-204ENST00000531046 ANKRD13CQ8N6S4 541 aa15.48■□□□□ 0.07
LINC01016-204ENST00000531046 CCDC17Q96LX7 622 aa15.48■□□□□ 0.07
LINC01016-204ENST00000531046 KIAA1683Q9H0B3 1180 aa15.48■□□□□ 0.07
LINC01016-204ENST00000531046 MKNK2Q9HBH9 465 aa15.48■□□□□ 0.07
LINC01016-204ENST00000531046 TAOK2Q9UL54 1235 aa15.48■□□□□ 0.07
LINC01016-204ENST00000531046 PTPN22Q9Y2R2 807 aa15.48■□□□□ 0.07
LINC01016-204ENST00000531046 PRDM1O75626 825 aa15.47■□□□□ 0.07
LINC01016-204ENST00000531046 FMNL1O95466 1100 aaPredicted RBP15.47■□□□□ 0.07
LINC01016-204ENST00000531046 RASA1P20936 1047 aa15.47■□□□□ 0.07
LINC01016-204ENST00000531046 USP14P54578 494 aa15.47■□□□□ 0.07
LINC01016-204ENST00000531046 ATP2B2Q01814 1243 aa15.47■□□□□ 0.07
LINC01016-204ENST00000531046 ICA1Q05084 483 aa15.47■□□□□ 0.07
LINC01016-204ENST00000531046 ARHGEF6Q15052 776 aa15.47■□□□□ 0.07
LINC01016-204ENST00000531046 SIAH1Q8IUQ4 282 aa15.47■□□□□ 0.07
LINC01016-204ENST00000531046 TRIM47Q96LD4 638 aa15.47■□□□□ 0.07
LINC01016-204ENST00000531046 P2RX7Q99572 595 aaKnown RBP15.47■□□□□ 0.07
LINC01016-204ENST00000531046 ROBO3Q96MS0 1386 aa15.47■□□□□ 0.07
LINC01016-204ENST00000531046 PEX10O60683 326 aa15.46■□□□□ 0.07
LINC01016-204ENST00000531046 GSPT1P15170 499 aaKnown RBP15.46■□□□□ 0.07
LINC01016-204ENST00000531046 VCAM1P19320 739 aa15.46■□□□□ 0.07
LINC01016-204ENST00000531046 HOXA7P31268 230 aaPredicted RBP15.46■□□□□ 0.07
LINC01016-204ENST00000531046 PPARAQ07869 468 aa15.46■□□□□ 0.07
LINC01016-204ENST00000531046 TTC22Q5TAA0 569 aa15.46■□□□□ 0.07
LINC01016-204ENST00000531046 CWC27Q6UX04 472 aaKnown RBP15.46■□□□□ 0.07
LINC01016-204ENST00000531046 C12orf42Q96LP6 360 aa15.46■□□□□ 0.07
LINC01016-204ENST00000531046 DIAPH3Q9NSV4 1193 aa15.46■□□□□ 0.07
LINC01016-204ENST00000531046 HERVK_113P62684 666 aa15.45■□□□□ 0.06
LINC01016-204ENST00000531046 CTDSPL2Q05D32 466 aa15.45■□□□□ 0.06
LINC01016-204ENST00000531046 KIAA1755Q5JYT7 1200 aa15.45■□□□□ 0.06
LINC01016-204ENST00000531046 TICAM2Q86XR7 235 aa15.45■□□□□ 0.06
LINC01016-204ENST00000531046 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.45■□□□□ 0.06
LINC01016-204ENST00000531046 ARHGEF10LQ9HCE6 1279 aa15.45■□□□□ 0.06
LINC01016-204ENST00000531046 INCENPQ9NQS7 918 aa15.45■□□□□ 0.06
LINC01016-204ENST00000531046 PTCH2Q9Y6C5 1203 aa15.45■□□□□ 0.06
LINC01016-204ENST00000531046 CCDC171Q6TFL3 1326 aa15.44■□□□□ 0.06
LINC01016-204ENST00000531046 USP17L15C9J2P7 530 aa15.44■□□□□ 0.06
LINC01016-204ENST00000531046 USP17L13C9JLJ4 530 aa15.44■□□□□ 0.06
LINC01016-204ENST00000531046 USP17L11C9JVI0 530 aa15.44■□□□□ 0.06
LINC01016-204ENST00000531046 USP17L18D6R9N7 530 aa15.44■□□□□ 0.06
LINC01016-204ENST00000531046 USP17L22D6RA61 530 aa15.44■□□□□ 0.06
LINC01016-204ENST00000531046 USP17L17D6RBQ6 530 aa15.44■□□□□ 0.06
LINC01016-204ENST00000531046 USP17L19D6RCP7 530 aa15.44■□□□□ 0.06
LINC01016-204ENST00000531046 USP17L20D6RJB6 530 aa15.44■□□□□ 0.06
LINC01016-204ENST00000531046 EEF2P13639 858 aaKnown RBP15.44■□□□□ 0.06
LINC01016-204ENST00000531046 GCLCP48506 637 aaPredicted RBP15.44■□□□□ 0.06
LINC01016-204ENST00000531046 USP17L24Q0WX57 530 aa15.44■□□□□ 0.06
LINC01016-204ENST00000531046 FAM110CQ1W6H9 321 aa15.44■□□□□ 0.06
LINC01016-204ENST00000531046 SKAP1Q86WV1 359 aa15.44■□□□□ 0.06
LINC01016-204ENST00000531046 ZNF444Q8N0Y2 327 aaPredicted RBP15.44■□□□□ 0.06
LINC01016-204ENST00000531046 SPICE1Q8N0Z3 855 aa15.44■□□□□ 0.06
LINC01016-204ENST00000531046 RPAP3Q9H6T3 665 aaPredicted RBP15.44■□□□□ 0.06
LINC01016-204ENST00000531046 KANSL2Q9H9L4 492 aa15.44■□□□□ 0.06
LINC01016-204ENST00000531046 TMX2Q9Y320 296 aa15.44■□□□□ 0.06
LINC01016-204ENST00000531046 MKI67P46013 3256 aaKnown RBP15.43■□□□□ 0.06
LINC01016-204ENST00000531046 RAD21O60216 631 aa15.43■□□□□ 0.06
LINC01016-204ENST00000531046 FGAP02671 866 aa15.43■□□□□ 0.06
LINC01016-204ENST00000531046 SLC3A2P08195 630 aaKnown RBP15.43■□□□□ 0.06
LINC01016-204ENST00000531046 HSPD1P10809 573 aaKnown RBP15.43■□□□□ 0.06
LINC01016-204ENST00000531046 FCGRTP55899 365 aa15.43■□□□□ 0.06
LINC01016-204ENST00000531046 PDE4BQ07343 736 aa15.43■□□□□ 0.06
LINC01016-204ENST00000531046 ALX1Q15699 326 aa15.43■□□□□ 0.06
LINC01016-204ENST00000531046 FAM47AQ5JRC9 791 aa15.43■□□□□ 0.06
LINC01016-204ENST00000531046 CATSPERGQ6ZRH7 1159 aa15.43■□□□□ 0.06
LINC01016-204ENST00000531046 PAGR1Q9BTK6 254 aa15.43■□□□□ 0.06
LINC01016-204ENST00000531046 ZNF287Q9HBT7 754 aa15.43■□□□□ 0.06
LINC01016-204ENST00000531046 TXNRD2Q9NNW7 524 aa15.43■□□□□ 0.06
LINC01016-204ENST00000531046 TACC3Q9Y6A5 838 aa15.43■□□□□ 0.06
LINC01016-204ENST00000531046 MGAMO43451 1857 aa15.42■□□□□ 0.06
LINC01016-204ENST00000531046 HIP1O00291 1037 aa15.42■□□□□ 0.06
LINC01016-204ENST00000531046 HOXD10P28358 340 aa15.42■□□□□ 0.06
LINC01016-204ENST00000531046 SOX10P56693 466 aa15.42■□□□□ 0.06
LINC01016-204ENST00000531046 POTEEQ6S8J3 1075 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms