RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 A6NHS1 94 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 SASH1O94885 1247 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 G3BP1Q13283 466 aaKnown RBP eCLIP9.14□□□□□ -0.951e-6■■□□□ 12.6
CSDE1-214ENST00000530886 ANKRD20A8PQ5CZ79 823 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 STOX1Q6ZVD7 989 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 CCDC170Q8IYT3 715 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 SPAG5Q96R06 1193 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 RFX7Q2KHR2 1363 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 WDR17Q8IZU2 1322 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 SURF6O75683 361 aaKnown RBP9.14□□□□□ -0.95
CSDE1-214ENST00000530886 PPP1R37O75864 691 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 PFKFB1P16118 471 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 EXOSC10Q01780 885 aaKnown RBP9.14□□□□□ -0.95
CSDE1-214ENST00000530886 ROR2Q01974 943 aaKnown RBP9.14□□□□□ -0.95
CSDE1-214ENST00000530886 AKAP17AQ02040 695 aaKnown RBP9.14□□□□□ -0.95
CSDE1-214ENST00000530886 NLRP14Q86W24 1093 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 PDILTQ8N807 584 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 ZBTB10Q96DT7 871 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 CCDC114Q96M63 670 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 ANKRD27Q96NW4 1050 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 C15orf41Q9Y2V0 281 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 PCDHGC5Q9Y5F6 944 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 UTYO14607 1347 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 SPTLC2O15270 562 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 ATP6V1G2O95670 118 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 SETSIPP0DME0 302 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 FERP16591 822 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 STK3Q13188 491 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 PPP4R3AQ6IN85 833 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 EMBQ6PCB8 327 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 TRIM74Q86UV6 250 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 TRIM73Q86UV7 250 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 GPATCH3Q96I76 525 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 CCT8L2Q96SF2 557 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 MOV10L1Q9BXT6 1211 aaKnown RBP9.14□□□□□ -0.95
CSDE1-214ENST00000530886 PHAXQ9H814 394 aaKnown RBP9.14□□□□□ -0.95
CSDE1-214ENST00000530886 CAMTA1Q9Y6Y1 1673 aa9.14□□□□□ -0.95
CSDE1-214ENST00000530886 PALLDQ8WX93 1383 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 UBN2Q6ZU65 1347 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 SH3TC1Q8TE82 1336 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 NCKAP5LQ9HCH0 1330 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 AFDNP55196 1824 aaKnown RBP9.13□□□□□ -0.95
CSDE1-214ENST00000530886 C5orf60A6NFR6 353 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 FAM163BP0C2L3 166 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 PDCLQ13371 301 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 NT5DC1Q5TFE4 455 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 NCAPH2Q6IBW4 605 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 CCDC121Q6ZUS5 278 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 ARMC9Q7Z3E5 817 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 TMTC1Q8IUR5 882 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 MMGT1Q8N4V1 131 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 CUL5Q93034 780 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 CNKSR1Q969H4 720 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 PTPRUQ92729 1446 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 PTPDC1A2A3K4 754 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 WASLO00401 505 aaPredicted RBP9.13□□□□□ -0.95
CSDE1-214ENST00000530886 ABLIM1O14639 778 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 MFAP3LO75121 409 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 UBTFL1P0CB47 393 aaPredicted RBP9.13□□□□□ -0.95
CSDE1-214ENST00000530886 MDM2Q00987 491 aaPredicted RBP9.13□□□□□ -0.95
CSDE1-214ENST00000530886 CCDC38Q502W7 563 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 IQCEQ6IPM2 695 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 SLC30A9Q6PML9 568 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 MTHFD1LQ6UB35 978 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 NCAPG2Q86XI2 1143 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 CNGA4Q8IV77 575 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 FOXP4Q8IVH2 680 aaPredicted RBP9.13□□□□□ -0.95
CSDE1-214ENST00000530886 NEK1Q96PY6 1258 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 BABAM1Q9NWV8 329 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 PKD1L3Q7Z443 1732 aa9.13□□□□□ -0.95
CSDE1-214ENST00000530886 SKAP2O75563 359 aaPredicted RBP9.12□□□□□ -0.95
CSDE1-214ENST00000530886 TFRCP02786 760 aaKnown RBP9.12□□□□□ -0.95
CSDE1-214ENST00000530886 CDC27P30260 824 aa9.12□□□□□ -0.95
CSDE1-214ENST00000530886 BLMHQ13867 455 aa9.12□□□□□ -0.95
CSDE1-214ENST00000530886 NUTM2AQ8IVF1 878 aaPredicted RBP9.12□□□□□ -0.95
CSDE1-214ENST00000530886 ZNF513Q8N8E2 541 aaPredicted RBP9.12□□□□□ -0.95
CSDE1-214ENST00000530886 ALS2CR12Q96Q35 445 aa9.12□□□□□ -0.95
CSDE1-214ENST00000530886 SEC62Q99442 399 aaKnown RBP9.12□□□□□ -0.95
CSDE1-214ENST00000530886 CDC5LQ99459 802 aaKnown RBP9.12□□□□□ -0.95
CSDE1-214ENST00000530886 KDM4CQ9H3R0 1056 aa9.12□□□□□ -0.95
CSDE1-214ENST00000530886 TSPYL4Q9UJ04 414 aa9.12□□□□□ -0.95
CSDE1-214ENST00000530886 HOOK1Q9UJC3 728 aaKnown RBP9.12□□□□□ -0.95
CSDE1-214ENST00000530886 USP6P35125 1406 aa9.12□□□□□ -0.95
CSDE1-214ENST00000530886 FRMD3A2A2Y4 597 aa9.12□□□□□ -0.95
CSDE1-214ENST00000530886 HMGB1P09429 215 aaKnown RBP9.12□□□□□ -0.95
CSDE1-214ENST00000530886 ALADP13716 330 aa9.12□□□□□ -0.95
CSDE1-214ENST00000530886 CCNG1P51959 295 aa9.12□□□□□ -0.95
CSDE1-214ENST00000530886 PSMD2Q13200 908 aa9.12□□□□□ -0.95
CSDE1-214ENST00000530886 SETDB1Q15047 1291 aa9.12□□□□□ -0.95
CSDE1-214ENST00000530886 STK38Q15208 465 aa9.12□□□□□ -0.95
CSDE1-214ENST00000530886 GLE1Q53GS7 698 aaKnown RBP9.12□□□□□ -0.95
CSDE1-214ENST00000530886 RNF187Q5TA31 235 aaPredicted RBP9.12□□□□□ -0.95
CSDE1-214ENST00000530886 SYNE3Q6ZMZ3 975 aa9.12□□□□□ -0.95
CSDE1-214ENST00000530886 NOD2Q9HC29 1040 aa9.12□□□□□ -0.95
CSDE1-214ENST00000530886 DACH1Q9UI36 760 aa9.12□□□□□ -0.95
CSDE1-214ENST00000530886 HEG1Q9ULI3 1381 aa9.12□□□□□ -0.95
CSDE1-214ENST00000530886 DNM1LO00429 736 aa9.12□□□□□ -0.95
CSDE1-214ENST00000530886 EPHB4P54760 987 aa9.12□□□□□ -0.95
CSDE1-214ENST00000530886 Q6ZUG5 572 aa9.12□□□□□ -0.95
CSDE1-214ENST00000530886 NSMCE1Q8WV22 266 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms