RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 NDUFB9Q9Y6M9 179 aa13.24□□□□□ -0.29
TRIM3-210ENST00000530724 RGPD2P0DJD1 1756 aa13.24□□□□□ -0.29
TRIM3-210ENST00000530724 PKD1L3Q7Z443 1732 aa13.23□□□□□ -0.29
TRIM3-210ENST00000530724 POLR2DO15514 142 aaKnown RBP13.23□□□□□ -0.29
TRIM3-210ENST00000530724 TEX33O43247 280 aa13.23□□□□□ -0.29
TRIM3-210ENST00000530724 GPAA1O43292 621 aa13.23□□□□□ -0.29
TRIM3-210ENST00000530724 KIF1CO43896 1103 aaKnown RBP13.23□□□□□ -0.29
TRIM3-210ENST00000530724 FSBPO95073 299 aa13.23□□□□□ -0.29
TRIM3-210ENST00000530724 DEXIO95424 95 aa13.23□□□□□ -0.29
TRIM3-210ENST00000530724 PRR29P0C7W0 189 aa13.23□□□□□ -0.29
TRIM3-210ENST00000530724 ADD2P35612 726 aa13.23□□□□□ -0.29
TRIM3-210ENST00000530724 FXR1P51114 621 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRIM3-210ENST00000530724 SSRP1Q08945 709 aaKnown RBP13.23□□□□□ -0.29
TRIM3-210ENST00000530724 PLCB4Q15147 1175 aa13.23□□□□□ -0.29
TRIM3-210ENST00000530724 ALS2CLQ60I27 953 aa13.23□□□□□ -0.29
TRIM3-210ENST00000530724 FOXR1Q6PIV2 292 aa13.23□□□□□ -0.29
TRIM3-210ENST00000530724 CHST3Q7LGC8 479 aa13.23□□□□□ -0.29
TRIM3-210ENST00000530724 CCDC170Q8IYT3 715 aa13.23□□□□□ -0.29
TRIM3-210ENST00000530724 MICALL1Q8N3F8 863 aa13.23□□□□□ -0.29
TRIM3-210ENST00000530724 NOA1Q8NC60 698 aaKnown RBP13.23□□□□□ -0.29
TRIM3-210ENST00000530724 FAM76AQ8TAV0 307 aa13.23□□□□□ -0.29
TRIM3-210ENST00000530724 CCDC102AQ96A19 550 aa13.23□□□□□ -0.29
TRIM3-210ENST00000530724 LRRC59Q96AG4 307 aaKnown RBP13.23□□□□□ -0.29
TRIM3-210ENST00000530724 ZNF496Q96IT1 587 aaPredicted RBP13.23□□□□□ -0.29
TRIM3-210ENST00000530724 LZTFL1Q9NQ48 299 aa13.23□□□□□ -0.29
TRIM3-210ENST00000530724 FAM184BQ9ULE4 1060 aa13.23□□□□□ -0.29
TRIM3-210ENST00000530724 EPN1Q9Y6I3 576 aaPredicted RBP13.23□□□□□ -0.29
TRIM3-210ENST00000530724 AFDNP55196 1824 aaKnown RBP13.23□□□□□ -0.29
TRIM3-210ENST00000530724 GOLGA8AA7E2F4 631 aa13.22□□□□□ -0.29
TRIM3-210ENST00000530724 AGPSO00116 658 aa13.22□□□□□ -0.29
TRIM3-210ENST00000530724 EXOC5O00471 708 aa13.22□□□□□ -0.29
TRIM3-210ENST00000530724 FOXN1O15353 648 aa13.22□□□□□ -0.29
TRIM3-210ENST00000530724 EIF3HO15372 352 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRIM3-210ENST00000530724 NDUFA10O95299 355 aa13.22□□□□□ -0.29
TRIM3-210ENST00000530724 CASP14P31944 242 aa13.22□□□□□ -0.29
TRIM3-210ENST00000530724 IRAK1P51617 712 aa13.22□□□□□ -0.29
TRIM3-210ENST00000530724 KRT83P78385 493 aa13.22□□□□□ -0.29
TRIM3-210ENST00000530724 FIGNQ5HY92 759 aa13.22□□□□□ -0.29
TRIM3-210ENST00000530724 ISM2Q6H9L7 571 aa13.22□□□□□ -0.29
TRIM3-210ENST00000530724 B4GALNT4Q76KP1 1039 aa13.22□□□□□ -0.29
TRIM3-210ENST00000530724 CYB5R4Q7L1T6 521 aa13.22□□□□□ -0.29
TRIM3-210ENST00000530724 PRPF38AQ8NAV1 312 aaKnown RBP13.22□□□□□ -0.29
TRIM3-210ENST00000530724 C3orf20Q8ND61 904 aa13.22□□□□□ -0.29
TRIM3-210ENST00000530724 ANKRD20A12PQ8NF67 263 aa13.22□□□□□ -0.29
TRIM3-210ENST00000530724 NOC3LQ8WTT2 800 aaKnown RBP13.22□□□□□ -0.29
TRIM3-210ENST00000530724 SMARCC1Q92922 1105 aaPredicted RBP13.22□□□□□ -0.29
TRIM3-210ENST00000530724 CAVIN3Q969G5 261 aa13.22□□□□□ -0.29
TRIM3-210ENST00000530724 GJB4Q9NTQ9 266 aa13.22□□□□□ -0.29
TRIM3-210ENST00000530724 REXO2Q9Y3B8 237 aaKnown RBP13.22□□□□□ -0.29
TRIM3-210ENST00000530724 SAR1BQ9Y6B6 198 aa13.22□□□□□ -0.29
TRIM3-210ENST00000530724 TRPM3Q9HCF6 1732 aaPredicted RBP13.22□□□□□ -0.29
TRIM3-210ENST00000530724 ECM29Q5VYK3 1845 aa13.21□□□□□ -0.29
TRIM3-210ENST00000530724 EBAG9O00559 213 aa13.21□□□□□ -0.29
TRIM3-210ENST00000530724 C21orf2O43822 256 aa13.21□□□□□ -0.29
TRIM3-210ENST00000530724 OPA1O60313 960 aa13.21□□□□□ -0.29
TRIM3-210ENST00000530724 MYL1P05976 194 aa13.21□□□□□ -0.29
TRIM3-210ENST00000530724 KCNA6P17658 529 aa13.21□□□□□ -0.29
TRIM3-210ENST00000530724 HOXA7P31268 230 aaPredicted RBP13.21□□□□□ -0.29
TRIM3-210ENST00000530724 COPB1P53618 953 aaKnown RBP13.21□□□□□ -0.29
TRIM3-210ENST00000530724 TIMM10P62072 90 aa13.21□□□□□ -0.29
TRIM3-210ENST00000530724 DRP2Q13474 957 aa13.21□□□□□ -0.29
TRIM3-210ENST00000530724 EMBQ6PCB8 327 aa13.21□□□□□ -0.29
TRIM3-210ENST00000530724 TAX1BP1Q86VP1 789 aa13.21□□□□□ -0.29
TRIM3-210ENST00000530724 TBC1D10CQ8IV04 446 aa13.21□□□□□ -0.29
TRIM3-210ENST00000530724 DIS3L2Q8IYB7 885 aaKnown RBP13.21□□□□□ -0.29
TRIM3-210ENST00000530724 CCDC155Q8N6L0 562 aa13.21□□□□□ -0.29
TRIM3-210ENST00000530724 EIF1ADQ8N9N8 165 aaKnown RBP13.21□□□□□ -0.29
TRIM3-210ENST00000530724 OR8K1Q8NGG5 319 aa13.21□□□□□ -0.29
TRIM3-210ENST00000530724 PAGE5Q96GU1 130 aa13.21□□□□□ -0.29
TRIM3-210ENST00000530724 NEUROD6Q96NK8 337 aa13.21□□□□□ -0.29
TRIM3-210ENST00000530724 SUGCTQ9HAC7 445 aa13.21□□□□□ -0.29
TRIM3-210ENST00000530724 CAPN11Q9UMQ6 739 aa13.21□□□□□ -0.29
TRIM3-210ENST00000530724 C1orf167Q5SNV9 1468 aa13.21□□□□□ -0.3
TRIM3-210ENST00000530724 GRIN2DO15399 1336 aa13.2□□□□□ -0.3
TRIM3-210ENST00000530724 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.2□□□□□ -0.3
TRIM3-210ENST00000530724 H7C1D1 291 aa13.2□□□□□ -0.3
TRIM3-210ENST00000530724 ERLIN2O94905 339 aa13.2□□□□□ -0.3
TRIM3-210ENST00000530724 CSF1RP07333 972 aa13.2□□□□□ -0.3
TRIM3-210ENST00000530724 RHOXF2BP0C7M4 288 aa13.2□□□□□ -0.3
TRIM3-210ENST00000530724 CD44P16070 742 aaKnown RBP13.2□□□□□ -0.3
TRIM3-210ENST00000530724 EEF1GP26641 437 aaKnown RBP13.2□□□□□ -0.3
TRIM3-210ENST00000530724 HNRNPH3P31942 346 aaKnown RBP13.2□□□□□ -0.3
TRIM3-210ENST00000530724 TRAPPC10P48553 1259 aa13.2□□□□□ -0.3
TRIM3-210ENST00000530724 KRT31Q15323 416 aa13.2□□□□□ -0.3
TRIM3-210ENST00000530724 GLE1Q53GS7 698 aaKnown RBP13.2□□□□□ -0.3
TRIM3-210ENST00000530724 ARHGAP27Q6ZUM4 889 aa13.2□□□□□ -0.3
TRIM3-210ENST00000530724 CD302Q8IX05 232 aa13.2□□□□□ -0.3
TRIM3-210ENST00000530724 TRIM22Q8IYM9 498 aa13.2□□□□□ -0.3
TRIM3-210ENST00000530724 IFNL2Q8IZJ0 200 aa13.2□□□□□ -0.3
TRIM3-210ENST00000530724 PLCD3Q8N3E9 789 aa13.2□□□□□ -0.3
TRIM3-210ENST00000530724 MREGQ8N565 214 aa13.2□□□□□ -0.3
TRIM3-210ENST00000530724 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRIM3-210ENST00000530724 AIFM3Q96NN9 605 aa13.2□□□□□ -0.3
TRIM3-210ENST00000530724 RHOXF2Q9BQY4 288 aa13.2□□□□□ -0.3
TRIM3-210ENST00000530724 CRACR2AQ9BSW2 395 aa13.2□□□□□ -0.3
TRIM3-210ENST00000530724 ISCA1Q9BUE6 129 aa13.2□□□□□ -0.3
TRIM3-210ENST00000530724 TSGA10Q9BZW7 698 aa13.2□□□□□ -0.3
TRIM3-210ENST00000530724 KRT23Q9C075 422 aa13.2□□□□□ -0.3
TRIM3-210ENST00000530724 PUS7LQ9H0K6 701 aaKnown RBP13.2□□□□□ -0.3
TRIM3-210ENST00000530724 RMND1Q9NWS8 449 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms