RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 RILPL2Q969X0 211 aa20.41■□□□□ 0.86
CCS-205ENST00000530384 C12orf42Q96LP6 360 aa20.41■□□□□ 0.86
CCS-205ENST00000530384 KIAA1683Q9H0B3 1180 aa20.41■□□□□ 0.86
CCS-205ENST00000530384 EPB41L4AQ9HCS5 686 aaPredicted RBP20.41■□□□□ 0.86
CCS-205ENST00000530384 PTPN22Q9Y2R2 807 aa20.41■□□□□ 0.86
CCS-205ENST00000530384 MINDY4BA8MYZ0 360 aa20.4■□□□□ 0.86
CCS-205ENST00000530384 GCLCP48506 637 aaPredicted RBP20.4■□□□□ 0.86
CCS-205ENST00000530384 IRX3P78415 501 aaPredicted RBP20.4■□□□□ 0.86
CCS-205ENST00000530384 CAP1Q01518 475 aa20.4■□□□□ 0.86
CCS-205ENST00000530384 ROBO3Q96MS0 1386 aa20.4■□□□□ 0.86
CCS-205ENST00000530384 ASCC2Q9H1I8 757 aaPredicted RBP20.4■□□□□ 0.86
CCS-205ENST00000530384 EMILIN3Q9NT22 766 aa20.4■□□□□ 0.86
CCS-205ENST00000530384 SMIM22K7EJ46 135 aa20.39■□□□□ 0.85
CCS-205ENST00000530384 AKR1B1P15121 316 aa20.39■□□□□ 0.85
CCS-205ENST00000530384 PSMC4P43686 418 aa20.39■□□□□ 0.85
CCS-205ENST00000530384 ARHGAP39Q9C0H5 1083 aa20.39■□□□□ 0.85
CCS-205ENST00000530384 NAPBQ9H115 298 aa20.39■□□□□ 0.85
CCS-205ENST00000530384 ZNF287Q9HBT7 754 aa20.39■□□□□ 0.85
CCS-205ENST00000530384 MGAMO43451 1857 aa20.39■□□□□ 0.85
CCS-205ENST00000530384 ZSWIM8A7E2V4 1837 aa20.39■□□□□ 0.85
CCS-205ENST00000530384 HOXD10P28358 340 aa20.38■□□□□ 0.85
CCS-205ENST00000530384 PRMT2P55345 433 aa20.38■□□□□ 0.85
CCS-205ENST00000530384 ZYXQ15942 572 aaKnown RBP20.38■□□□□ 0.85
CCS-205ENST00000530384 FAM110CQ1W6H9 321 aa20.38■□□□□ 0.85
CCS-205ENST00000530384 ACER1Q8TDN7 264 aa20.38■□□□□ 0.85
CCS-205ENST00000530384 FMNL1O95466 1100 aaPredicted RBP20.37■□□□□ 0.85
CCS-205ENST00000530384 FCGRTP55899 365 aa20.37■□□□□ 0.85
CCS-205ENST00000530384 ICA1Q05084 483 aa20.37■□□□□ 0.85
CCS-205ENST00000530384 MCMDC2Q4G0Z9 681 aa20.37■□□□□ 0.85
CCS-205ENST00000530384 CCDC129Q6ZRS4 1044 aa20.37■□□□□ 0.85
CCS-205ENST00000530384 ANKRD13CQ8N6S4 541 aa20.37■□□□□ 0.85
CCS-205ENST00000530384 SH2D4AQ9H788 454 aa20.37■□□□□ 0.85
CCS-205ENST00000530384 MKNK2Q9HBH9 465 aa20.37■□□□□ 0.85
CCS-205ENST00000530384 ARHGEF10LQ9HCE6 1279 aa20.37■□□□□ 0.85
CCS-205ENST00000530384 A0A0D9SFI3 127 aa20.36■□□□□ 0.85
CCS-205ENST00000530384 SLC3A2P08195 630 aaKnown RBP20.36■□□□□ 0.85
CCS-205ENST00000530384 GTF3C2Q8WUA4 911 aaPredicted RBP20.36■□□□□ 0.85
CCS-205ENST00000530384 TRIM47Q96LD4 638 aa20.36■□□□□ 0.85
CCS-205ENST00000530384 FAM227BQ96M60 508 aa20.36■□□□□ 0.85
CCS-205ENST00000530384 KANSL2Q9H9L4 492 aa20.36■□□□□ 0.85
CCS-205ENST00000530384 USP17L15C9J2P7 530 aa20.35■□□□□ 0.85
CCS-205ENST00000530384 USP17L13C9JLJ4 530 aa20.35■□□□□ 0.85
CCS-205ENST00000530384 USP17L11C9JVI0 530 aa20.35■□□□□ 0.85
CCS-205ENST00000530384 USP17L18D6R9N7 530 aa20.35■□□□□ 0.85
CCS-205ENST00000530384 USP17L22D6RA61 530 aa20.35■□□□□ 0.85
CCS-205ENST00000530384 USP17L17D6RBQ6 530 aa20.35■□□□□ 0.85
CCS-205ENST00000530384 USP17L19D6RCP7 530 aa20.35■□□□□ 0.85
CCS-205ENST00000530384 USP17L20D6RJB6 530 aa20.35■□□□□ 0.85
CCS-205ENST00000530384 VCAM1P19320 739 aa20.35■□□□□ 0.85
CCS-205ENST00000530384 SDSP20132 328 aa20.35■□□□□ 0.85
CCS-205ENST00000530384 CTGFP29279 349 aa20.35■□□□□ 0.85
CCS-205ENST00000530384 USP17L24Q0WX57 530 aa20.35■□□□□ 0.85
CCS-205ENST00000530384 NMIQ13287 307 aaPredicted RBP20.35■□□□□ 0.85
CCS-205ENST00000530384 P2RX7Q99572 595 aaKnown RBP20.35■□□□□ 0.85
CCS-205ENST00000530384 SRRDQ9UH36 339 aa20.35■□□□□ 0.85
CCS-205ENST00000530384 GREB1LQ9C091 1923 aaPredicted RBP20.34■□□□□ 0.85
CCS-205ENST00000530384 A0A1W2PRG0 241 aa20.34■□□□□ 0.85
CCS-205ENST00000530384 HIP1O00291 1037 aa20.34■□□□□ 0.85
CCS-205ENST00000530384 ECM2O94769 699 aaPredicted RBP20.34■□□□□ 0.85
CCS-205ENST00000530384 RASA1P20936 1047 aa20.34■□□□□ 0.85
CCS-205ENST00000530384 PDE4AP27815 886 aa20.34■□□□□ 0.85
CCS-205ENST00000530384 MFAP1P55081 439 aaKnown RBP20.34■□□□□ 0.85
CCS-205ENST00000530384 HERVK_113P62684 666 aa20.34■□□□□ 0.85
CCS-205ENST00000530384 PDE4BQ07343 736 aa20.34■□□□□ 0.85
CCS-205ENST00000530384 PPARAQ07869 468 aa20.34■□□□□ 0.85
CCS-205ENST00000530384 STK11IPQ8N1F8 1099 aa20.34■□□□□ 0.85
CCS-205ENST00000530384 TMX2Q9Y320 296 aa20.34■□□□□ 0.85
CCS-205ENST00000530384 PTCH2Q9Y6C5 1203 aa20.34■□□□□ 0.85
CCS-205ENST00000530384 FOXP2O15409 715 aa20.33■□□□□ 0.85
CCS-205ENST00000530384 ALX1Q15699 326 aa20.33■□□□□ 0.85
CCS-205ENST00000530384 CATSPERGQ6ZRH7 1159 aa20.33■□□□□ 0.85
CCS-205ENST00000530384 ZNF444Q8N0Y2 327 aaPredicted RBP20.33■□□□□ 0.85
CCS-205ENST00000530384 LPAR1Q92633 364 aa20.33■□□□□ 0.85
CCS-205ENST00000530384 DIAPH3Q9NSV4 1193 aa20.33■□□□□ 0.85
CCS-205ENST00000530384 MORF4L1Q9UBU8 362 aa20.33■□□□□ 0.85
CCS-205ENST00000530384 CCDC171Q6TFL3 1326 aa20.32■□□□□ 0.84
CCS-205ENST00000530384 MYPNQ86TC9 1320 aa20.32■□□□□ 0.84
CCS-205ENST00000530384 TTC22Q5TAA0 569 aa20.32■□□□□ 0.84
CCS-205ENST00000530384 VPS53Q5VIR6 699 aa20.32■□□□□ 0.84
CCS-205ENST00000530384 CLEC10AQ8IUN9 316 aa20.32■□□□□ 0.84
CCS-205ENST00000530384 SIAH1Q8IUQ4 282 aa20.32■□□□□ 0.84
CCS-205ENST00000530384 TNPO2O14787 897 aaKnown RBP20.31■□□□□ 0.84
CCS-205ENST00000530384 EEF2P13639 858 aaKnown RBP20.31■□□□□ 0.84
CCS-205ENST00000530384 SLC9C1Q4G0N8 1177 aa20.31■□□□□ 0.84
CCS-205ENST00000530384 NBPF11Q86T75 865 aa20.31■□□□□ 0.84
CCS-205ENST00000530384 COA7Q96BR5 231 aa20.31■□□□□ 0.84
CCS-205ENST00000530384 ARMC5Q96C12 935 aa20.31■□□□□ 0.84
CCS-205ENST00000530384 RPAP3Q9H6T3 665 aaPredicted RBP20.31■□□□□ 0.84
CCS-205ENST00000530384 VCPKMTQ9H867 229 aa20.31■□□□□ 0.84
CCS-205ENST00000530384 ZMYM6O95789 1325 aa20.3■□□□□ 0.84
CCS-205ENST00000530384 PRDM1O75626 825 aa20.3■□□□□ 0.84
CCS-205ENST00000530384 HSPD1P10809 573 aaKnown RBP20.3■□□□□ 0.84
CCS-205ENST00000530384 ATP2B2Q01814 1243 aa20.3■□□□□ 0.84
CCS-205ENST00000530384 ZNF589Q86UQ0 364 aaPredicted RBP20.3■□□□□ 0.84
CCS-205ENST00000530384 GPRC5AQ8NFJ5 357 aa20.3■□□□□ 0.84
CCS-205ENST00000530384 RAET1EQ8TD07 263 aa20.3■□□□□ 0.84
CCS-205ENST00000530384 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.3■□□□□ 0.84
CCS-205ENST00000530384 DOCK3Q8IZD9 2030 aa20.3■□□□□ 0.84
CCS-205ENST00000530384 PRKCZQ05513 592 aa20.29■□□□□ 0.84
CCS-205ENST00000530384 CWC27Q6UX04 472 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms