RNA–Protein interactions for RNA: ENST00000530296.5

CTSB-217, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-217ENST00000530296 A0A1W2PPC1 479 aa16.78■□□□□ 0.28
CTSB-217ENST00000530296 SLC3A2P08195 630 aaKnown RBP16.78■□□□□ 0.28
CTSB-217ENST00000530296 ASNSP08243 561 aa16.78■□□□□ 0.28
CTSB-217ENST00000530296 BCRP11274 1271 aa16.78■□□□□ 0.28
CTSB-217ENST00000530296 CCL5P13501 91 aa16.78■□□□□ 0.28
CTSB-217ENST00000530296 CAP2P40123 477 aa16.78■□□□□ 0.28
CTSB-217ENST00000530296 PLCD1P51178 756 aa16.78■□□□□ 0.28
CTSB-217ENST00000530296 C12orf60Q5U649 245 aa16.78■□□□□ 0.28
CTSB-217ENST00000530296 CWC27Q6UX04 472 aaKnown RBP16.78■□□□□ 0.28
CTSB-217ENST00000530296 IFNL3Q8IZI9 196 aa16.78■□□□□ 0.28
CTSB-217ENST00000530296 SHISA4Q96DD7 197 aa16.78■□□□□ 0.28
CTSB-217ENST00000530296 DDX60LQ5H9U9 1706 aaKnown RBP16.78■□□□□ 0.28
CTSB-217ENST00000530296 TRIOBPQ9H2D6 2365 aa16.78■□□□□ 0.28
CTSB-217ENST00000530296 ZSWIM8A7E2V4 1837 aa16.77■□□□□ 0.28
CTSB-217ENST00000530296 A0A0G2JLL6 359 aaPredicted RBP16.77■□□□□ 0.28
CTSB-217ENST00000530296 MOGSQ13724 837 aa16.77■□□□□ 0.28
CTSB-217ENST00000530296 TATDN1Q6P1N9 297 aa16.77■□□□□ 0.28
CTSB-217ENST00000530296 CTR9Q6PD62 1173 aa16.77■□□□□ 0.28
CTSB-217ENST00000530296 CASC1Q6TDU7 716 aa16.77■□□□□ 0.28
CTSB-217ENST00000530296 CHRDL2Q6WN34 429 aa16.77■□□□□ 0.28
CTSB-217ENST00000530296 PRRT2Q7Z6L0 340 aaPredicted RBP16.77■□□□□ 0.28
CTSB-217ENST00000530296 UBE2Q1Q7Z7E8 422 aa16.77■□□□□ 0.28
CTSB-217ENST00000530296 PXYLP1Q8TE99 480 aa16.77■□□□□ 0.28
CTSB-217ENST00000530296 FAM196BA6NMK8 535 aa16.76■□□□□ 0.27
CTSB-217ENST00000530296 CTGFP29279 349 aa16.76■□□□□ 0.27
CTSB-217ENST00000530296 GABPAQ06546 454 aa16.76■□□□□ 0.27
CTSB-217ENST00000530296 ALX1Q15699 326 aa16.76■□□□□ 0.27
CTSB-217ENST00000530296 CERKLQ49MI3 558 aaPredicted RBP16.76■□□□□ 0.27
CTSB-217ENST00000530296 CCDC17Q96LX7 622 aa16.76■□□□□ 0.27
CTSB-217ENST00000530296 AS3MTQ9HBK9 375 aa16.76■□□□□ 0.27
CTSB-217ENST00000530296 CABP5Q9NP86 173 aa16.76■□□□□ 0.27
CTSB-217ENST00000530296 MGAMO43451 1857 aa16.76■□□□□ 0.27
CTSB-217ENST00000530296 ZMYM6O95789 1325 aa16.75■□□□□ 0.27
CTSB-217ENST00000530296 MINDY4BA8MYZ0 360 aa16.75■□□□□ 0.27
CTSB-217ENST00000530296 SGPL1O95470 568 aa16.75■□□□□ 0.27
CTSB-217ENST00000530296 PTPRAP18433 802 aa16.75■□□□□ 0.27
CTSB-217ENST00000530296 CHMLP26374 656 aa16.75■□□□□ 0.27
CTSB-217ENST00000530296 PRKCZQ05513 592 aa16.75■□□□□ 0.27
CTSB-217ENST00000530296 IRF5Q13568 498 aa16.75■□□□□ 0.27
CTSB-217ENST00000530296 GPAT2Q6NUI2 795 aa16.75■□□□□ 0.27
CTSB-217ENST00000530296 CCDC129Q6ZRS4 1044 aa16.75■□□□□ 0.27
CTSB-217ENST00000530296 U2AF1L4Q8WU68 220 aaKnown RBP16.75■□□□□ 0.27
CTSB-217ENST00000530296 DNAJC18Q9H819 358 aa16.75■□□□□ 0.27
CTSB-217ENST00000530296 EPB41L4AQ9HCS5 686 aaPredicted RBP16.75■□□□□ 0.27
CTSB-217ENST00000530296 ZHX2Q9Y6X8 837 aa16.75■□□□□ 0.27
CTSB-217ENST00000530296 DOCK1Q14185 1865 aa16.74■□□□□ 0.27
CTSB-217ENST00000530296 USP17L5A8MUK1 530 aa16.74■□□□□ 0.27
CTSB-217ENST00000530296 ADCY3O60266 1144 aa16.74■□□□□ 0.27
CTSB-217ENST00000530296 FARP2O94887 1054 aaPredicted RBP16.74■□□□□ 0.27
CTSB-217ENST00000530296 HSPD1P10809 573 aaKnown RBP16.74■□□□□ 0.27
CTSB-217ENST00000530296 PDE4BQ07343 736 aa16.74■□□□□ 0.27
CTSB-217ENST00000530296 C16orf86Q6ZW13 317 aa16.74■□□□□ 0.27
CTSB-217ENST00000530296 SMCR8Q8TEV9 937 aaPredicted RBP16.74■□□□□ 0.27
CTSB-217ENST00000530296 RBM27Q9P2N5 1060 aaKnown RBP16.74■□□□□ 0.27
CTSB-217ENST00000530296 CTNNA3Q9UI47 895 aa16.74■□□□□ 0.27
CTSB-217ENST00000530296 PNMA3Q9UL41 463 aa16.74■□□□□ 0.27
CTSB-217ENST00000530296 AFG3L2Q9Y4W6 797 aa16.74■□□□□ 0.27
CTSB-217ENST00000530296 SIPA1L1O43166 1804 aa16.74■□□□□ 0.27
CTSB-217ENST00000530296 ROBO3Q96MS0 1386 aa16.74■□□□□ 0.27
CTSB-217ENST00000530296 BAZ2AQ9UIF9 1905 aaKnown RBP16.73■□□□□ 0.27
CTSB-217ENST00000530296 CYP2C8P10632 490 aa16.73■□□□□ 0.27
CTSB-217ENST00000530296 CYP2D6P10635 497 aa16.73■□□□□ 0.27
CTSB-217ENST00000530296 SHMT1P34896 483 aa16.73■□□□□ 0.27
CTSB-217ENST00000530296 ABCB5Q2M3G0 1257 aa16.73■□□□□ 0.27
CTSB-217ENST00000530296 ZNF589Q86UQ0 364 aaPredicted RBP16.73■□□□□ 0.27
CTSB-217ENST00000530296 COA7Q96BR5 231 aa16.73■□□□□ 0.27
CTSB-217ENST00000530296 DSCC1Q9BVC3 393 aa16.73■□□□□ 0.27
CTSB-217ENST00000530296 MKNK2Q9HBH9 465 aa16.73■□□□□ 0.27
CTSB-217ENST00000530296 RANBP2P49792 3224 aaKnown RBP16.72■□□□□ 0.27
CTSB-217ENST00000530296 SZT2Q5T011 3432 aa16.72■□□□□ 0.27
CTSB-217ENST00000530296 TNPO2O14787 897 aaKnown RBP16.72■□□□□ 0.27
CTSB-217ENST00000530296 CDK8P49336 464 aa16.72■□□□□ 0.27
CTSB-217ENST00000530296 PPARAQ07869 468 aa16.72■□□□□ 0.27
CTSB-217ENST00000530296 GADL1Q6ZQY3 521 aa16.72■□□□□ 0.27
CTSB-217ENST00000530296 ZBTB21Q9ULJ3 1066 aa16.72■□□□□ 0.27
CTSB-217ENST00000530296 CYP2D7A0A087X1C5 515 aa16.71■□□□□ 0.27
CTSB-217ENST00000530296 EVI5O60447 810 aa16.71■□□□□ 0.27
CTSB-217ENST00000530296 CDC45O75419 566 aa16.71■□□□□ 0.27
CTSB-217ENST00000530296 ECM2O94769 699 aaPredicted RBP16.71■□□□□ 0.27
CTSB-217ENST00000530296 FGAP02671 866 aa16.71■□□□□ 0.27
CTSB-217ENST00000530296 SLURP2P0DP57 97 aa16.71■□□□□ 0.27
CTSB-217ENST00000530296 PCP11498 1178 aaKnown RBP16.71■□□□□ 0.27
CTSB-217ENST00000530296 FLT3LGP49771 235 aa16.71■□□□□ 0.27
CTSB-217ENST00000530296 NT5C2P49902 561 aa16.71■□□□□ 0.27
CTSB-217ENST00000530296 PABPC4Q13310 644 aaKnown RBP eCLIP16.71■□□□□ 0.27
CTSB-217ENST00000530296 VPS53Q5VIR6 699 aa16.71■□□□□ 0.27
CTSB-217ENST00000530296 KIAA1211Q6ZU35 1233 aa16.71■□□□□ 0.27
CTSB-217ENST00000530296 TMEM179Q6ZVK1 233 aa16.71■□□□□ 0.27
CTSB-217ENST00000530296 ZNF444Q8N0Y2 327 aaPredicted RBP16.71■□□□□ 0.27
CTSB-217ENST00000530296 PROCA1Q8NCQ7 364 aaPredicted RBP16.71■□□□□ 0.27
CTSB-217ENST00000530296 ZNF280CQ8ND82 737 aa16.71■□□□□ 0.27
CTSB-217ENST00000530296 DYNLL2Q96FJ2 89 aa16.71■□□□□ 0.27
CTSB-217ENST00000530296 WDR18Q9BV38 432 aa16.71■□□□□ 0.27
CTSB-217ENST00000530296 PRO3102Q9H379 93 aa16.71■□□□□ 0.27
CTSB-217ENST00000530296 ANAPC4Q9UJX5 808 aa16.71■□□□□ 0.27
CTSB-217ENST00000530296 AGTPBP1Q9UPW5 1226 aa16.71■□□□□ 0.27
CTSB-217ENST00000530296 MPHOSPH10O00566 681 aaKnown RBP16.7■□□□□ 0.26
CTSB-217ENST00000530296 SGSM2O43147 1006 aa16.7■□□□□ 0.26
CTSB-217ENST00000530296 GDF11O95390 407 aa16.7■□□□□ 0.26
CTSB-217ENST00000530296 GH2P01242 217 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms