RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 C19orf73Q9NVV2 129 aa5.77□□□□□ -1.49
CTR9-205ENST00000529898 CORINQ9Y5Q5 1042 aa5.77□□□□□ -1.49
CTR9-205ENST00000529898 ARID1BQ8NFD5 2236 aaPredicted RBP5.76□□□□□ -1.49
CTR9-205ENST00000529898 C8AP07357 584 aa5.76□□□□□ -1.49
CTR9-205ENST00000529898 GDNFP39905 211 aa5.76□□□□□ -1.49
CTR9-205ENST00000529898 MRPL58Q14197 206 aaKnown RBP5.76□□□□□ -1.49
CTR9-205ENST00000529898 CDKAL1Q5VV42 579 aa5.76□□□□□ -1.49
CTR9-205ENST00000529898 XAGE3Q8WTP9 111 aa5.76□□□□□ -1.49
CTR9-205ENST00000529898 DUSP15Q9H1R2 295 aaPredicted RBP5.76□□□□□ -1.49
CTR9-205ENST00000529898 CARS2Q9HA77 564 aaKnown RBP5.76□□□□□ -1.49
CTR9-205ENST00000529898 ROBO2Q9HCK4 1378 aa5.76□□□□□ -1.49
CTR9-205ENST00000529898 BTBD11A6QL63 1104 aa5.75□□□□□ -1.49
CTR9-205ENST00000529898 H3BS24 57 aa5.75□□□□□ -1.49
CTR9-205ENST00000529898 CBX7O95931 251 aa5.75□□□□□ -1.49
CTR9-205ENST00000529898 ESR1P03372 595 aa5.75□□□□□ -1.49
CTR9-205ENST00000529898 PLCG1P19174 1290 aa5.75□□□□□ -1.49
CTR9-205ENST00000529898 AFMP43652 599 aa5.75□□□□□ -1.49
CTR9-205ENST00000529898 MPP2Q14168 576 aa5.75□□□□□ -1.49
CTR9-205ENST00000529898 GAB4Q2WGN9 574 aa5.75□□□□□ -1.49
CTR9-205ENST00000529898 TMPRSS7Q7RTY8 843 aa5.75□□□□□ -1.49
CTR9-205ENST00000529898 ZSWIM9Q86XI8 627 aa5.75□□□□□ -1.49
CTR9-205ENST00000529898 UBE2FQ969M7 185 aa5.75□□□□□ -1.49
CTR9-205ENST00000529898 DPH2Q9BQC3 489 aaPredicted RBP5.75□□□□□ -1.49
CTR9-205ENST00000529898 LRRC3Q9BY71 257 aa5.75□□□□□ -1.49
CTR9-205ENST00000529898 MRS2Q9HD23 443 aa5.75□□□□□ -1.49
CTR9-205ENST00000529898 VTI1BQ9UEU0 232 aa5.75□□□□□ -1.49
CTR9-205ENST00000529898 POLR3KQ9Y2Y1 108 aaPredicted RBP5.75□□□□□ -1.49
CTR9-205ENST00000529898 ZNF503-AS2A6NEH8 195 aa5.74□□□□□ -1.49
CTR9-205ENST00000529898 UPK3BL1B0FP48 263 aa5.74□□□□□ -1.49
CTR9-205ENST00000529898 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.74□□□□□ -1.49
CTR9-205ENST00000529898 UPK3BL2E5RIL1 263 aa5.74□□□□□ -1.49
CTR9-205ENST00000529898 RBAK-RBAKDNI3L0D1 243 aa5.74□□□□□ -1.49
CTR9-205ENST00000529898 GREM1O60565 184 aa5.74□□□□□ -1.49
CTR9-205ENST00000529898 BPNT1O95861 308 aa5.74□□□□□ -1.49
CTR9-205ENST00000529898 GBP2P32456 591 aaPredicted RBP5.74□□□□□ -1.49
CTR9-205ENST00000529898 YARSP54577 528 aaKnown RBP5.74□□□□□ -1.49
CTR9-205ENST00000529898 MESP2Q0VG99 397 aa5.74□□□□□ -1.49
CTR9-205ENST00000529898 FAM196AQ6ZSG2 479 aa5.74□□□□□ -1.49
CTR9-205ENST00000529898 CCDC120Q96HB5 630 aa5.74□□□□□ -1.49
CTR9-205ENST00000529898 GPR62Q9BZJ7 368 aa5.74□□□□□ -1.49
CTR9-205ENST00000529898 FAM53CQ9NYF3 392 aa5.74□□□□□ -1.49
CTR9-205ENST00000529898 FARP2O94887 1054 aaPredicted RBP5.73□□□□□ -1.49
CTR9-205ENST00000529898 HTR3BO95264 441 aa5.73□□□□□ -1.49
CTR9-205ENST00000529898 FYB2Q5VWT5 728 aa5.73□□□□□ -1.49
CTR9-205ENST00000529898 REC114Q7Z4M0 266 aa5.73□□□□□ -1.49
CTR9-205ENST00000529898 BHLHE22Q8NFJ8 381 aaPredicted RBP5.73□□□□□ -1.49
CTR9-205ENST00000529898 RNF141Q8WVD5 230 aa5.73□□□□□ -1.49
CTR9-205ENST00000529898 VWCEQ96DN2 955 aa5.73□□□□□ -1.49
CTR9-205ENST00000529898 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.73□□□□□ -1.49
CTR9-205ENST00000529898 ZSWIM5Q9P217 1185 aa5.73□□□□□ -1.49
CTR9-205ENST00000529898 REV1Q9UBZ9 1251 aa5.73□□□□□ -1.49
CTR9-205ENST00000529898 CLSPNQ9HAW4 1339 aa5.73□□□□□ -1.49
CTR9-205ENST00000529898 ATE1O95260 518 aa5.72□□□□□ -1.49
CTR9-205ENST00000529898 FZD5Q13467 585 aa5.72□□□□□ -1.49
CTR9-205ENST00000529898 FBXL19Q6PCT2 694 aa5.72□□□□□ -1.49
CTR9-205ENST00000529898 DTWD2Q8NBA8 298 aa5.72□□□□□ -1.49
CTR9-205ENST00000529898 GOLM1Q8NBJ4 401 aa5.72□□□□□ -1.49
CTR9-205ENST00000529898 FAM13CQ8NE31 585 aa5.72□□□□□ -1.49
CTR9-205ENST00000529898 ALPK1Q96QP1 1244 aa5.72□□□□□ -1.49
CTR9-205ENST00000529898 KBTBD4Q9NVX7 518 aa5.72□□□□□ -1.49
CTR9-205ENST00000529898 CHURC1-FNTBB4DL54 471 aa5.71□□□□□ -1.5
CTR9-205ENST00000529898 F6X3S4 739 aa5.71□□□□□ -1.5
CTR9-205ENST00000529898 DNAJA2O60884 412 aa5.71□□□□□ -1.5
CTR9-205ENST00000529898 GLI1P08151 1106 aa5.71□□□□□ -1.5
CTR9-205ENST00000529898 JAG1P78504 1218 aa5.71□□□□□ -1.5
CTR9-205ENST00000529898 KCNMB1Q16558 191 aa5.71□□□□□ -1.5
CTR9-205ENST00000529898 ZNF326Q5BKZ1 582 aaKnown RBP5.71□□□□□ -1.5
CTR9-205ENST00000529898 TSPYL5Q86VY4 417 aaPredicted RBP5.71□□□□□ -1.5
CTR9-205ENST00000529898 PKNOX2Q96KN3 472 aa5.71□□□□□ -1.5
CTR9-205ENST00000529898 CCDC74BQ96LY2 380 aa5.71□□□□□ -1.5
CTR9-205ENST00000529898 BCL2L13Q9BXK5 485 aa5.71□□□□□ -1.5
CTR9-205ENST00000529898 TRIT1Q9H3H1 467 aaKnown RBP5.71□□□□□ -1.5
CTR9-205ENST00000529898 COPRSQ9NQ92 184 aa5.71□□□□□ -1.5
CTR9-205ENST00000529898 RBM47A0AV96 593 aaKnown RBP5.7□□□□□ -1.5
CTR9-205ENST00000529898 MINDY4BA8MYZ0 360 aa5.7□□□□□ -1.5
CTR9-205ENST00000529898 EIF4A3P38919 411 aaKnown RBP5.7□□□□□ -1.5
CTR9-205ENST00000529898 FAM160A1Q05DH4 1040 aa5.7□□□□□ -1.5
CTR9-205ENST00000529898 SNAP47Q5SQN1 464 aa5.7□□□□□ -1.5
CTR9-205ENST00000529898 ZNF648Q5T619 568 aaPredicted RBP5.7□□□□□ -1.5
CTR9-205ENST00000529898 LDLRAD1Q5T700 205 aa5.7□□□□□ -1.5
CTR9-205ENST00000529898 FBXO27Q8NI29 283 aa5.7□□□□□ -1.5
CTR9-205ENST00000529898 KIRREL1Q96J84 757 aa5.7□□□□□ -1.5
CTR9-205ENST00000529898 FAM84AQ96KN4 292 aa5.7□□□□□ -1.5
CTR9-205ENST00000529898 ASPNQ9BXN1 380 aa5.7□□□□□ -1.5
CTR9-205ENST00000529898 EHMT1Q9H9B1 1298 aa5.7□□□□□ -1.5
CTR9-205ENST00000529898 GPATCH2Q9NW75 528 aa5.7□□□□□ -1.5
CTR9-205ENST00000529898 KCNH3Q9ULD8 1083 aa5.7□□□□□ -1.5
CTR9-205ENST00000529898 KRTAP4-8A0A0G2JLE6 195 aa5.69□□□□□ -1.5
CTR9-205ENST00000529898 SLC22A31A6NKX4 558 aa5.69□□□□□ -1.5
CTR9-205ENST00000529898 WASH4PA8MWX3 477 aa5.69□□□□□ -1.5
CTR9-205ENST00000529898 RGS13O14921 159 aa5.69□□□□□ -1.5
CTR9-205ENST00000529898 TPP2P29144 1249 aaPredicted RBP5.69□□□□□ -1.5
CTR9-205ENST00000529898 KREMEN1Q96MU8 473 aa5.69□□□□□ -1.5
CTR9-205ENST00000529898 SP110Q9HB58 689 aa5.69□□□□□ -1.5
CTR9-205ENST00000529898 TMEM59LQ9UK28 342 aa5.69□□□□□ -1.5
CTR9-205ENST00000529898 ZNF281Q9Y2X9 895 aa5.69□□□□□ -1.5
CTR9-205ENST00000529898 SUPT16HQ9Y5B9 1047 aaKnown RBP5.69□□□□□ -1.5
CTR9-205ENST00000529898 DNAJC25-GNG10A0A024R161 153 aa5.68□□□□□ -1.5
CTR9-205ENST00000529898 LRRC10BA6NIK2 292 aa5.68□□□□□ -1.5
CTR9-205ENST00000529898 GRIN3BO60391 1043 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms