RNA–Protein interactions for RNA: ENST00000529524.1

PSMA1-208, Transcript of proteasome subunit alpha 1, human

TSL 3

Gene PSMA1, Length 743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMA1-208	ENST00000529524	DIRC2	Q96SL1	478 aa		7.43	□□□□□ -1.22
PSMA1-208	ENST00000529524	TRIT1	Q9H3H1	467 aa	Known RBP	7.43	□□□□□ -1.22
PSMA1-208	ENST00000529524	MRS2	Q9HD23	443 aa		7.43	□□□□□ -1.22
PSMA1-208	ENST00000529524	CORIN	Q9Y5Q5	1042 aa		7.43	□□□□□ -1.22
PSMA1-208	ENST00000529524	UPK3BL1	B0FP48	263 aa		7.42	□□□□□ -1.22
PSMA1-208	ENST00000529524	UPK3BL2	E5RIL1	263 aa		7.42	□□□□□ -1.22
PSMA1-208	ENST00000529524	TPP2	P29144	1249 aa	Predicted RBP	7.42	□□□□□ -1.22
PSMA1-208	ENST00000529524	TNNI2	P48788	182 aa		7.42	□□□□□ -1.22
PSMA1-208	ENST00000529524	ST13	P50502	369 aa	Known RBP	7.42	□□□□□ -1.22
PSMA1-208	ENST00000529524	HK2	P52789	917 aa		7.42	□□□□□ -1.22
PSMA1-208	ENST00000529524	YARS	P54577	528 aa	Known RBP	7.42	□□□□□ -1.22
PSMA1-208	ENST00000529524	SYDE1	Q6ZW31	735 aa	Predicted RBP	7.42	□□□□□ -1.22
PSMA1-208	ENST00000529524	PHC3	Q8NDX5	983 aa		7.42	□□□□□ -1.22
PSMA1-208	ENST00000529524	ABHD4	Q8TB40	342 aa		7.42	□□□□□ -1.22
PSMA1-208	ENST00000529524	C19orf73	Q9NVV2	129 aa		7.42	□□□□□ -1.22
PSMA1-208	ENST00000529524	GPATCH2	Q9NW75	528 aa		7.42	□□□□□ -1.22
PSMA1-208	ENST00000529524	KCNH3	Q9ULD8	1083 aa		7.42	□□□□□ -1.22
PSMA1-208	ENST00000529524	WASH4P	A8MWX3	477 aa		7.41	□□□□□ -1.22
PSMA1-208	ENST00000529524	CHMP4BP1	P59074	171 aa		7.41	□□□□□ -1.22
PSMA1-208	ENST00000529524	BNC2	Q6ZN30	1099 aa	Predicted RBP	7.41	□□□□□ -1.22
PSMA1-208	ENST00000529524	SYTL4	Q96C24	671 aa	Predicted RBP	7.41	□□□□□ -1.22
PSMA1-208	ENST00000529524	PPP1R16B	Q96T49	567 aa		7.41	□□□□□ -1.22
PSMA1-208	ENST00000529524	USP31	Q70CQ4	1352 aa		7.41	□□□□□ -1.22
PSMA1-208	ENST00000529524	DNAJC25-GNG10	A0A024R161	153 aa		7.4	□□□□□ -1.22
PSMA1-208	ENST00000529524	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	7.4	□□□□□ -1.22
PSMA1-208	ENST00000529524	SORBS3	O60504	671 aa		7.4	□□□□□ -1.22
PSMA1-208	ENST00000529524	PF4	P02776	101 aa		7.4	□□□□□ -1.22
PSMA1-208	ENST00000529524	GBP2	P32456	591 aa	Predicted RBP	7.4	□□□□□ -1.22
PSMA1-208	ENST00000529524	CAMK2G	Q13555	558 aa	Predicted RBP	7.4	□□□□□ -1.22
PSMA1-208	ENST00000529524	RALGPS1	Q5JS13	557 aa		7.4	□□□□□ -1.22
PSMA1-208	ENST00000529524	TMC4	Q7Z404	712 aa		7.4	□□□□□ -1.22
PSMA1-208	ENST00000529524	CCDC84	Q86UT8	332 aa	Predicted RBP	7.4	□□□□□ -1.22
PSMA1-208	ENST00000529524	MYLIP	Q8WY64	445 aa		7.4	□□□□□ -1.22
PSMA1-208	ENST00000529524	ADAMTS10	Q9H324	1103 aa		7.4	□□□□□ -1.22
PSMA1-208	ENST00000529524	NSUN3	Q9H649	340 aa	Known RBP	7.4	□□□□□ -1.22
PSMA1-208	ENST00000529524	VTI1B	Q9UEU0	232 aa		7.4	□□□□□ -1.22
PSMA1-208	ENST00000529524	ESR1	P03372	595 aa		7.39	□□□□□ -1.23
PSMA1-208	ENST00000529524	LMNB2	Q03252	620 aa		7.39	□□□□□ -1.23
PSMA1-208	ENST00000529524	ANKLE2	Q86XL3	938 aa		7.39	□□□□□ -1.23
PSMA1-208	ENST00000529524	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	7.39	□□□□□ -1.23
PSMA1-208	ENST00000529524	DNAJB8	Q8NHS0	232 aa		7.39	□□□□□ -1.23
PSMA1-208	ENST00000529524		Q96M66	194 aa		7.39	□□□□□ -1.23
PSMA1-208	ENST00000529524	DUSP15	Q9H1R2	295 aa	Predicted RBP	7.39	□□□□□ -1.23
PSMA1-208	ENST00000529524	DUSP13	Q9UII6	198 aa		7.39	□□□□□ -1.23
PSMA1-208	ENST00000529524	TMEM59L	Q9UK28	342 aa		7.39	□□□□□ -1.23
PSMA1-208	ENST00000529524	MINDY4B	A8MYZ0	360 aa		7.38	□□□□□ -1.23
PSMA1-208	ENST00000529524	F13A1	P00488	732 aa		7.38	□□□□□ -1.23
PSMA1-208	ENST00000529524	CTSH	P09668	335 aa		7.38	□□□□□ -1.23
PSMA1-208	ENST00000529524	ERVFC1	P60507	584 aa		7.38	□□□□□ -1.23
PSMA1-208	ENST00000529524	CYB5D2	Q8WUJ1	264 aa		7.38	□□□□□ -1.23
PSMA1-208	ENST00000529524	GATAD2B	Q8WXI9	593 aa		7.38	□□□□□ -1.23
PSMA1-208	ENST00000529524	TOX2	Q96NM4	488 aa		7.38	□□□□□ -1.23
PSMA1-208	ENST00000529524	KLHL3	Q9UH77	587 aa		7.38	□□□□□ -1.23
PSMA1-208	ENST00000529524	NFIB	O00712	420 aa		7.37	□□□□□ -1.23
PSMA1-208	ENST00000529524	GRIN3B	O60391	1043 aa		7.37	□□□□□ -1.23
PSMA1-208	ENST00000529524	CILP	O75339	1184 aa		7.37	□□□□□ -1.23
PSMA1-208	ENST00000529524	TMEM253	P0C7T8	217 aa		7.37	□□□□□ -1.23
PSMA1-208	ENST00000529524	LTK	P29376	864 aa		7.37	□□□□□ -1.23
PSMA1-208	ENST00000529524	ITGAE	P38570	1179 aa		7.37	□□□□□ -1.23
PSMA1-208	ENST00000529524	FAM160A1	Q05DH4	1040 aa		7.37	□□□□□ -1.23
PSMA1-208	ENST00000529524	EGR3	Q06889	387 aa		7.37	□□□□□ -1.23
PSMA1-208	ENST00000529524	PWP1	Q13610	501 aa		7.37	□□□□□ -1.23
PSMA1-208	ENST00000529524	FBXO15	Q8NCQ5	510 aa	Predicted RBP	7.37	□□□□□ -1.23
PSMA1-208	ENST00000529524	PPP1R13L	Q8WUF5	828 aa		7.37	□□□□□ -1.23
PSMA1-208	ENST00000529524	TMEM74	Q96NL1	305 aa		7.37	□□□□□ -1.23
PSMA1-208	ENST00000529524	DCP1A	Q9NPI6	582 aa	Predicted RBP	7.37	□□□□□ -1.23
PSMA1-208	ENST00000529524	LRRN2	O75325	713 aa		7.36	□□□□□ -1.23
PSMA1-208	ENST00000529524	TMEM201	Q5SNT2	666 aa		7.36	□□□□□ -1.23
PSMA1-208	ENST00000529524	SNAP47	Q5SQN1	464 aa		7.36	□□□□□ -1.23
PSMA1-208	ENST00000529524	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	7.36	□□□□□ -1.23
PSMA1-208	ENST00000529524	PHACTR4	Q8IZ21	702 aa		7.36	□□□□□ -1.23
PSMA1-208	ENST00000529524	DTWD2	Q8NBA8	298 aa		7.36	□□□□□ -1.23
PSMA1-208	ENST00000529524	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	7.36	□□□□□ -1.23
PSMA1-208	ENST00000529524	CRELD1	Q96HD1	420 aa		7.36	□□□□□ -1.23
PSMA1-208	ENST00000529524	CCDC74B	Q96LY2	380 aa		7.36	□□□□□ -1.23
PSMA1-208	ENST00000529524	GPR62	Q9BZJ7	368 aa		7.36	□□□□□ -1.23
PSMA1-208	ENST00000529524	REV1	Q9UBZ9	1251 aa		7.36	□□□□□ -1.23
PSMA1-208	ENST00000529524	FAM221A	A4D161	298 aa		7.35	□□□□□ -1.23
PSMA1-208	ENST00000529524	GBP1	P32455	592 aa		7.35	□□□□□ -1.23
PSMA1-208	ENST00000529524	CLEC16A	Q2KHT3	1053 aa		7.35	□□□□□ -1.23
PSMA1-208	ENST00000529524	TSPYL5	Q86VY4	417 aa	Predicted RBP	7.35	□□□□□ -1.23
PSMA1-208	ENST00000529524	GOLM1	Q8NBJ4	401 aa		7.35	□□□□□ -1.23
PSMA1-208	ENST00000529524	RSRP1	Q9BUV0	290 aa		7.35	□□□□□ -1.23
PSMA1-208	ENST00000529524	EPB41L4B	Q9H329	900 aa		7.35	□□□□□ -1.23
PSMA1-208	ENST00000529524	CHURC1-FNTB	B4DL54	471 aa		7.34	□□□□□ -1.23
PSMA1-208	ENST00000529524	TSPAN15	O95858	294 aa		7.34	□□□□□ -1.23
PSMA1-208	ENST00000529524	C1QTNF9	P0C862	333 aa		7.34	□□□□□ -1.23
PSMA1-208	ENST00000529524	TRHR	P34981	398 aa	Predicted RBP	7.34	□□□□□ -1.23
PSMA1-208	ENST00000529524	TAGLN	Q01995	201 aa	Known RBP	7.34	□□□□□ -1.23
PSMA1-208	ENST00000529524	FBLN7	Q53RD9	439 aa		7.34	□□□□□ -1.23
PSMA1-208	ENST00000529524	FBXO33	Q7Z6M2	555 aa		7.34	□□□□□ -1.23
PSMA1-208	ENST00000529524	SLFN12	Q8IYM2	578 aa		7.34	□□□□□ -1.23
PSMA1-208	ENST00000529524	OXR1	Q8N573	874 aa		7.34	□□□□□ -1.23
PSMA1-208	ENST00000529524	BAHD1	Q8TBE0	780 aa	Predicted RBP	7.34	□□□□□ -1.23
PSMA1-208	ENST00000529524	RNF141	Q8WVD5	230 aa		7.34	□□□□□ -1.23
PSMA1-208	ENST00000529524	DHX38	Q92620	1227 aa	Known RBP	7.34	□□□□□ -1.23
PSMA1-208	ENST00000529524	ASCC2	Q9H1I8	757 aa	Predicted RBP	7.34	□□□□□ -1.23
PSMA1-208	ENST00000529524	C19orf44	Q9H6X5	657 aa		7.34	□□□□□ -1.23
PSMA1-208	ENST00000529524	KCNK12	Q9HB15	430 aa		7.34	□□□□□ -1.23
PSMA1-208	ENST00000529524	HTR3B	O95264	441 aa		7.33	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms