RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	B4GALNT3	Q6L9W6	998 aa		14.11	□□□□□ -0.15
PSMC3-205	ENST00000528362	GIMAP6	Q6P9H5	292 aa		14.11	□□□□□ -0.15
PSMC3-205	ENST00000528362	AMOTL1	Q8IY63	956 aa		14.11	□□□□□ -0.15
PSMC3-205	ENST00000528362	SEC62	Q99442	399 aa	Known RBP	14.11	□□□□□ -0.15
PSMC3-205	ENST00000528362	ARPP21	Q9UBL0	812 aa	Predicted RBP	14.11	□□□□□ -0.15
PSMC3-205	ENST00000528362	SRRD	Q9UH36	339 aa		14.11	□□□□□ -0.15
PSMC3-205	ENST00000528362	LOC285556	D6RIA3	1793 aa		14.1	□□□□□ -0.15
PSMC3-205	ENST00000528362		A0A1W2PRG0	241 aa		14.1	□□□□□ -0.15
PSMC3-205	ENST00000528362	AKR1B1	P15121	316 aa		14.1	□□□□□ -0.15
PSMC3-205	ENST00000528362	GNAT2	P19087	354 aa		14.1	□□□□□ -0.15
PSMC3-205	ENST00000528362	GCLC	P48506	637 aa	Predicted RBP	14.1	□□□□□ -0.15
PSMC3-205	ENST00000528362	IRX6	P78412	446 aa	Predicted RBP	14.1	□□□□□ -0.15
PSMC3-205	ENST00000528362	PRKCZ	Q05513	592 aa		14.1	□□□□□ -0.15
PSMC3-205	ENST00000528362	SLC9C1	Q4G0N8	1177 aa		14.1	□□□□□ -0.15
PSMC3-205	ENST00000528362	SBK1	Q52WX2	424 aa		14.1	□□□□□ -0.15
PSMC3-205	ENST00000528362	TMEM179	Q6ZVK1	233 aa		14.1	□□□□□ -0.15
PSMC3-205	ENST00000528362	CHD1L	Q86WJ1	897 aa		14.1	□□□□□ -0.15
PSMC3-205	ENST00000528362	CLEC10A	Q8IUN9	316 aa		14.1	□□□□□ -0.15
PSMC3-205	ENST00000528362	EVI5L	Q96CN4	794 aa		14.1	□□□□□ -0.15
PSMC3-205	ENST00000528362	ZNF333	Q96JL9	665 aa		14.1	□□□□□ -0.15
PSMC3-205	ENST00000528362	MYPN	Q86TC9	1320 aa		14.1	□□□□□ -0.15
PSMC3-205	ENST00000528362	NAV1	Q8NEY1	1877 aa		14.1	□□□□□ -0.15
PSMC3-205	ENST00000528362	VCAM1	P19320	739 aa		14.09	□□□□□ -0.15
PSMC3-205	ENST00000528362	HOXD10	P28358	340 aa		14.09	□□□□□ -0.15
PSMC3-205	ENST00000528362	USP14	P54578	494 aa		14.09	□□□□□ -0.15
PSMC3-205	ENST00000528362	HERVK_113	P62684	666 aa		14.09	□□□□□ -0.15
PSMC3-205	ENST00000528362	POTEE	Q6S8J3	1075 aa		14.09	□□□□□ -0.15
PSMC3-205	ENST00000528362	SH3TC2	Q8TF17	1288 aa		14.09	□□□□□ -0.15
PSMC3-205	ENST00000528362	CCDC17	Q96LX7	622 aa		14.09	□□□□□ -0.15
PSMC3-205	ENST00000528362	P2RX7	Q99572	595 aa	Known RBP	14.09	□□□□□ -0.15
PSMC3-205	ENST00000528362	MKI67	P46013	3256 aa	Known RBP	14.09	□□□□□ -0.15
PSMC3-205	ENST00000528362	PTPRF	P10586	1907 aa		14.09	□□□□□ -0.15
PSMC3-205	ENST00000528362	ROBO3	Q96MS0	1386 aa		14.09	□□□□□ -0.15
PSMC3-205	ENST00000528362	MYH1	P12882	1939 aa		14.08	□□□□□ -0.16
PSMC3-205	ENST00000528362	FOXP2	O15409	715 aa		14.08	□□□□□ -0.16
PSMC3-205	ENST00000528362	PEX10	O60683	326 aa		14.08	□□□□□ -0.16
PSMC3-205	ENST00000528362	SIAH1	Q8IUQ4	282 aa		14.08	□□□□□ -0.16
PSMC3-205	ENST00000528362	TXNRD2	Q9NNW7	524 aa		14.08	□□□□□ -0.16
PSMC3-205	ENST00000528362	MORF4L1	Q9UBU8	362 aa		14.08	□□□□□ -0.16
PSMC3-205	ENST00000528362	GABRQ	Q9UN88	632 aa		14.08	□□□□□ -0.16
PSMC3-205	ENST00000528362	ZSWIM8	A7E2V4	1837 aa		14.08	□□□□□ -0.16
PSMC3-205	ENST00000528362	ATAD5	Q96QE3	1844 aa		14.07	□□□□□ -0.16
PSMC3-205	ENST00000528362	POTEF	A5A3E0	1075 aa		14.07	□□□□□ -0.16
PSMC3-205	ENST00000528362	USP17L15	C9J2P7	530 aa		14.07	□□□□□ -0.16
PSMC3-205	ENST00000528362	PATL2	C9JE40	543 aa	Known RBP	14.07	□□□□□ -0.16
PSMC3-205	ENST00000528362	USP17L13	C9JLJ4	530 aa		14.07	□□□□□ -0.16
PSMC3-205	ENST00000528362	USP17L11	C9JVI0	530 aa		14.07	□□□□□ -0.16
PSMC3-205	ENST00000528362	USP17L18	D6R9N7	530 aa		14.07	□□□□□ -0.16
PSMC3-205	ENST00000528362	USP17L22	D6RA61	530 aa		14.07	□□□□□ -0.16
PSMC3-205	ENST00000528362	USP17L17	D6RBQ6	530 aa		14.07	□□□□□ -0.16
PSMC3-205	ENST00000528362	USP17L19	D6RCP7	530 aa		14.07	□□□□□ -0.16
PSMC3-205	ENST00000528362	USP17L20	D6RJB6	530 aa		14.07	□□□□□ -0.16
PSMC3-205	ENST00000528362	TNPO2	O14787	897 aa	Known RBP	14.07	□□□□□ -0.16
PSMC3-205	ENST00000528362	APP	P05067	770 aa		14.07	□□□□□ -0.16
PSMC3-205	ENST00000528362	TDO2	P48775	406 aa		14.07	□□□□□ -0.16
PSMC3-205	ENST00000528362	ICA1	Q05084	483 aa		14.07	□□□□□ -0.16
PSMC3-205	ENST00000528362	USP17L24	Q0WX57	530 aa		14.07	□□□□□ -0.16
PSMC3-205	ENST00000528362	CCDC129	Q6ZRS4	1044 aa		14.07	□□□□□ -0.16
PSMC3-205	ENST00000528362	NBPF11	Q86T75	865 aa		14.07	□□□□□ -0.16
PSMC3-205	ENST00000528362	PLEKHM2	Q8IWE5	1019 aa		14.07	□□□□□ -0.16
PSMC3-205	ENST00000528362	RAET1E	Q8TD07	263 aa		14.07	□□□□□ -0.16
PSMC3-205	ENST00000528362	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	14.07	□□□□□ -0.16
PSMC3-205	ENST00000528362	RBPJL	Q9UBG7	517 aa		14.07	□□□□□ -0.16
PSMC3-205	ENST00000528362	MINDY4B	A8MYZ0	360 aa		14.06	□□□□□ -0.16
PSMC3-205	ENST00000528362	RASA1	P20936	1047 aa		14.06	□□□□□ -0.16
PSMC3-205	ENST00000528362	FLT3LG	P49771	235 aa		14.06	□□□□□ -0.16
PSMC3-205	ENST00000528362	KIAA1755	Q5JYT7	1200 aa		14.06	□□□□□ -0.16
PSMC3-205	ENST00000528362	CATSPERG	Q6ZRH7	1159 aa		14.06	□□□□□ -0.16
PSMC3-205	ENST00000528362	IFNL3	Q8IZI9	196 aa		14.06	□□□□□ -0.16
PSMC3-205	ENST00000528362	STK11IP	Q8N1F8	1099 aa		14.06	□□□□□ -0.16
PSMC3-205	ENST00000528362	OSBPL3	Q9H4L5	887 aa		14.06	□□□□□ -0.16
PSMC3-205	ENST00000528362	RPAP3	Q9H6T3	665 aa	Predicted RBP	14.06	□□□□□ -0.16
PSMC3-205	ENST00000528362		A0A0D9SFI3	127 aa		14.05	□□□□□ -0.16
PSMC3-205	ENST00000528362	MYC	P01106	439 aa	Predicted RBP	14.05	□□□□□ -0.16
PSMC3-205	ENST00000528362	GRK4	P32298	578 aa		14.05	□□□□□ -0.16
PSMC3-205	ENST00000528362	GPRC5A	Q8NFJ5	357 aa		14.05	□□□□□ -0.16
PSMC3-205	ENST00000528362	GTF3C2	Q8WUA4	911 aa	Predicted RBP	14.05	□□□□□ -0.16
PSMC3-205	ENST00000528362	COA7	Q96BR5	231 aa		14.05	□□□□□ -0.16
PSMC3-205	ENST00000528362	FAM227B	Q96M60	508 aa		14.05	□□□□□ -0.16
PSMC3-205	ENST00000528362	NACAP1	Q9BZK3	213 aa		14.05	□□□□□ -0.16
PSMC3-205	ENST00000528362	TMX2	Q9Y320	296 aa		14.05	□□□□□ -0.16
PSMC3-205	ENST00000528362	SPDYE16	A6NNV3	312 aa	Predicted RBP	14.04	□□□□□ -0.16
PSMC3-205	ENST00000528362	CNMD	O75829	334 aa		14.04	□□□□□ -0.16
PSMC3-205	ENST00000528362	EEF2	P13639	858 aa	Known RBP	14.04	□□□□□ -0.16
PSMC3-205	ENST00000528362	ERVK-9	P63128	1117 aa		14.04	□□□□□ -0.16
PSMC3-205	ENST00000528362	ERVK-24	P63145	666 aa		14.04	□□□□□ -0.16
PSMC3-205	ENST00000528362	IRF5	Q13568	498 aa		14.04	□□□□□ -0.16
PSMC3-205	ENST00000528362		Q3C1V9	767 aa		14.04	□□□□□ -0.16
PSMC3-205	ENST00000528362	VPS53	Q5VIR6	699 aa		14.04	□□□□□ -0.16
PSMC3-205	ENST00000528362	LBX2	Q6XYB7	198 aa		14.04	□□□□□ -0.16
PSMC3-205	ENST00000528362	TICAM2	Q86XR7	235 aa		14.04	□□□□□ -0.16
PSMC3-205	ENST00000528362	SLAIN1	Q8ND83	568 aa		14.04	□□□□□ -0.16
PSMC3-205	ENST00000528362	LPAR1	Q92633	364 aa		14.04	□□□□□ -0.16
PSMC3-205	ENST00000528362	PAGR1	Q9BTK6	254 aa		14.04	□□□□□ -0.16
PSMC3-205	ENST00000528362	NAPB	Q9H115	298 aa		14.04	□□□□□ -0.16
PSMC3-205	ENST00000528362	VCPKMT	Q9H867	229 aa		14.04	□□□□□ -0.16
PSMC3-205	ENST00000528362	KANSL2	Q9H9L4	492 aa		14.04	□□□□□ -0.16
PSMC3-205	ENST00000528362	MKNK2	Q9HBH9	465 aa		14.04	□□□□□ -0.16
PSMC3-205	ENST00000528362	ARHGEF10L	Q9HCE6	1279 aa		14.04	□□□□□ -0.16
PSMC3-205	ENST00000528362	HELLS	Q9NRZ9	838 aa		14.04	□□□□□ -0.16

Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms