RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 FOXN1O15353 648 aa15.3■□□□□ 0.04
SCN3B-205ENST00000528267 SNAPC2Q13487 334 aa15.3■□□□□ 0.04
SCN3B-205ENST00000528267 TREML2Q5T2D2 321 aa15.3■□□□□ 0.04
SCN3B-205ENST00000528267 TMEM179Q6ZVK1 233 aa15.3■□□□□ 0.04
SCN3B-205ENST00000528267 MKNK2Q9HBH9 465 aa15.3■□□□□ 0.04
SCN3B-205ENST00000528267 RNF186Q9NXI6 227 aa15.3■□□□□ 0.04
SCN3B-205ENST00000528267 RBM8AQ9Y5S9 174 aaKnown RBP15.3■□□□□ 0.04
SCN3B-205ENST00000528267 ORC4O43929 436 aa15.29■□□□□ 0.04
SCN3B-205ENST00000528267 NMT2O60551 498 aa15.29■□□□□ 0.04
SCN3B-205ENST00000528267 HMGCS2P54868 508 aa15.29■□□□□ 0.04
SCN3B-205ENST00000528267 SREBF2Q12772 1141 aa15.29■□□□□ 0.04
SCN3B-205ENST00000528267 SH3D19Q5HYK7 790 aa15.29■□□□□ 0.04
SCN3B-205ENST00000528267 AKNAD1Q5T1N1 836 aa15.29■□□□□ 0.04
SCN3B-205ENST00000528267 CCDC17Q96LX7 622 aa15.29■□□□□ 0.04
SCN3B-205ENST00000528267 CABP5Q9NP86 173 aa15.29■□□□□ 0.04
SCN3B-205ENST00000528267 IL17RBQ9NRM6 502 aa15.29■□□□□ 0.04
SCN3B-205ENST00000528267 EMILIN3Q9NT22 766 aa15.29■□□□□ 0.04
SCN3B-205ENST00000528267 ZNF213O14771 459 aa15.28■□□□□ 0.04
SCN3B-205ENST00000528267 CETPP11597 493 aa15.28■□□□□ 0.04
SCN3B-205ENST00000528267 BACE1P56817 501 aa15.28■□□□□ 0.04
SCN3B-205ENST00000528267 TFAP4Q01664 338 aa15.28■□□□□ 0.04
SCN3B-205ENST00000528267 MAP2K1Q02750 393 aaPredicted RBP15.28■□□□□ 0.04
SCN3B-205ENST00000528267 ICA1Q05084 483 aa15.28■□□□□ 0.04
SCN3B-205ENST00000528267 PDE4BQ07343 736 aa15.28■□□□□ 0.04
SCN3B-205ENST00000528267 NECTIN1Q15223 517 aa15.28■□□□□ 0.04
SCN3B-205ENST00000528267 ZYXQ15942 572 aaKnown RBP15.28■□□□□ 0.04
SCN3B-205ENST00000528267 NEDD1Q8NHV4 660 aa15.28■□□□□ 0.04
SCN3B-205ENST00000528267 CEP95Q96GE4 821 aa15.28■□□□□ 0.04
SCN3B-205ENST00000528267 ANO2Q9NQ90 1003 aa15.28■□□□□ 0.04
SCN3B-205ENST00000528267 ADGRA2Q96PE1 1338 aa15.27■□□□□ 0.04
SCN3B-205ENST00000528267 USP17L10C9JJH3 530 aa15.27■□□□□ 0.04
SCN3B-205ENST00000528267 TRPA1O75762 1119 aa15.27■□□□□ 0.04
SCN3B-205ENST00000528267 EEF2P13639 858 aaKnown RBP15.27■□□□□ 0.04
SCN3B-205ENST00000528267 NOVP48745 357 aa15.27■□□□□ 0.04
SCN3B-205ENST00000528267 GADL1Q6ZQY3 521 aa15.27■□□□□ 0.04
SCN3B-205ENST00000528267 C12orf42Q96LP6 360 aa15.27■□□□□ 0.04
SCN3B-205ENST00000528267 TBC1D2Q9BYX2 928 aa15.27■□□□□ 0.04
SCN3B-205ENST00000528267 AS3MTQ9HBK9 375 aa15.27■□□□□ 0.04
SCN3B-205ENST00000528267 U3KPZ7 1027 aaPredicted RBP15.27■□□□□ 0.04
SCN3B-205ENST00000528267 A0A0G2JMZ2 1700 aa15.26■□□□□ 0.03
SCN3B-205ENST00000528267 SLC27A2O14975 620 aa15.26■□□□□ 0.03
SCN3B-205ENST00000528267 TBC1D8O95759 1140 aa15.26■□□□□ 0.03
SCN3B-205ENST00000528267 SLC3A2P08195 630 aaKnown RBP15.26■□□□□ 0.03
SCN3B-205ENST00000528267 HSPA8P11142 646 aaKnown RBP15.26■□□□□ 0.03
SCN3B-205ENST00000528267 CAP1Q01518 475 aa15.26■□□□□ 0.03
SCN3B-205ENST00000528267 CRHR2Q13324 411 aa15.26■□□□□ 0.03
SCN3B-205ENST00000528267 IMMTQ16891 758 aaKnown RBP15.26■□□□□ 0.03
SCN3B-205ENST00000528267 RRP12Q5JTH9 1297 aaKnown RBP15.26■□□□□ 0.03
SCN3B-205ENST00000528267 POTEEQ6S8J3 1075 aa15.26■□□□□ 0.03
SCN3B-205ENST00000528267 RASGRP2Q7LDG7 609 aa15.26■□□□□ 0.03
SCN3B-205ENST00000528267 ANKRD23Q86SG2 305 aa15.26■□□□□ 0.03
SCN3B-205ENST00000528267 ZNF444Q8N0Y2 327 aaPredicted RBP15.26■□□□□ 0.03
SCN3B-205ENST00000528267 KIAA1683Q9H0B3 1180 aa15.26■□□□□ 0.03
SCN3B-205ENST00000528267 MTMR4Q9NYA4 1195 aa15.26■□□□□ 0.03
SCN3B-205ENST00000528267 CASP8AP2Q9UKL3 1982 aa15.25■□□□□ 0.03
SCN3B-205ENST00000528267 B4E1Z4 1266 aa15.25■□□□□ 0.03
SCN3B-205ENST00000528267 PDHXO00330 501 aa15.25■□□□□ 0.03
SCN3B-205ENST00000528267 RANBP6O60518 1105 aaKnown RBP15.25■□□□□ 0.03
SCN3B-205ENST00000528267 TSPY3P0CV98 308 aa15.25■□□□□ 0.03
SCN3B-205ENST00000528267 TSPY8P0CW00 308 aa15.25■□□□□ 0.03
SCN3B-205ENST00000528267 INHBEP58166 350 aa15.25■□□□□ 0.03
SCN3B-205ENST00000528267 CREB3L3Q68CJ9 461 aa15.25■□□□□ 0.03
SCN3B-205ENST00000528267 RCSD1Q6JBY9 416 aa15.25■□□□□ 0.03
SCN3B-205ENST00000528267 MFSD6Q6ZSS7 791 aa15.25■□□□□ 0.03
SCN3B-205ENST00000528267 CYB5R4Q7L1T6 521 aa15.25■□□□□ 0.03
SCN3B-205ENST00000528267 REM2Q8IYK8 340 aaPredicted RBP15.25■□□□□ 0.03
SCN3B-205ENST00000528267 CFHR5Q9BXR6 569 aa15.25■□□□□ 0.03
SCN3B-205ENST00000528267 CTNNA3Q9UI47 895 aa15.25■□□□□ 0.03
SCN3B-205ENST00000528267 AGTPBP1Q9UPW5 1226 aa15.25■□□□□ 0.03
SCN3B-205ENST00000528267 TMX2Q9Y320 296 aa15.25■□□□□ 0.03
SCN3B-205ENST00000528267 TSPY2A6NKD2 308 aa15.24■□□□□ 0.03
SCN3B-205ENST00000528267 E7EWF7 191 aa15.24■□□□□ 0.03
SCN3B-205ENST00000528267 KDM4AO75164 1064 aa15.24■□□□□ 0.03
SCN3B-205ENST00000528267 CYP2C8P10632 490 aa15.24■□□□□ 0.03
SCN3B-205ENST00000528267 VCAM1P19320 739 aa15.24■□□□□ 0.03
SCN3B-205ENST00000528267 C8orf34Q49A92 452 aa15.24■□□□□ 0.03
SCN3B-205ENST00000528267 USP17L2Q6R6M4 530 aa15.24■□□□□ 0.03
SCN3B-205ENST00000528267 RASEFQ8IZ41 740 aa15.24■□□□□ 0.03
SCN3B-205ENST00000528267 LRRC47Q8N1G4 583 aaKnown RBP15.24■□□□□ 0.03
SCN3B-205ENST00000528267 PROCA1Q8NCQ7 364 aaPredicted RBP15.24■□□□□ 0.03
SCN3B-205ENST00000528267 ZKSCAN3Q9BRR0 538 aa15.24■□□□□ 0.03
SCN3B-205ENST00000528267 KANSL2Q9H9L4 492 aa15.24■□□□□ 0.03
SCN3B-205ENST00000528267 TOMM22Q9NS69 142 aa15.24■□□□□ 0.03
SCN3B-205ENST00000528267 SAGE1Q9NXZ1 904 aa15.24■□□□□ 0.03
SCN3B-205ENST00000528267 NYAP2Q9P242 653 aa15.24■□□□□ 0.03
SCN3B-205ENST00000528267 COL11A1P12107 1806 aaPredicted RBP15.24■□□□□ 0.03
SCN3B-205ENST00000528267 C19orf81C9J6K1 198 aa15.23■□□□□ 0.03
SCN3B-205ENST00000528267 PEX10O60683 326 aa15.23■□□□□ 0.03
SCN3B-205ENST00000528267 SEC24BO95487 1268 aa15.23■□□□□ 0.03
SCN3B-205ENST00000528267 ANTXR2P58335 489 aa15.23■□□□□ 0.03
SCN3B-205ENST00000528267 ATP2B2Q01814 1243 aa15.23■□□□□ 0.03
SCN3B-205ENST00000528267 CASC1Q6TDU7 716 aa15.23■□□□□ 0.03
SCN3B-205ENST00000528267 KIAA1211Q6ZU35 1233 aa15.23■□□□□ 0.03
SCN3B-205ENST00000528267 FASTKD5Q7L8L6 764 aaKnown RBP15.23■□□□□ 0.03
SCN3B-205ENST00000528267 FEZ1Q99689 392 aa15.23■□□□□ 0.03
SCN3B-205ENST00000528267 VCPKMTQ9H867 229 aa15.23■□□□□ 0.03
SCN3B-205ENST00000528267 ZNF287Q9HBT7 754 aa15.23■□□□□ 0.03
SCN3B-205ENST00000528267 ZSWIM5Q9P217 1185 aa15.23■□□□□ 0.03
SCN3B-205ENST00000528267 CA12O43570 354 aa15.22■□□□□ 0.03
SCN3B-205ENST00000528267 PCP11498 1178 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms