RNA–Protein interactions for RNA: ENST00000527008.1

ZNF408-203, Transcript of zinc finger protein 408, humanhuman

TSL 2

Gene ZNF408, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408-203ENST00000527008 TMEM179Q6ZVK1 233 aa12.13□□□□□ -0.47
ZNF408-203ENST00000527008 EPB41L4AQ9HCS5 686 aaPredicted RBP12.13□□□□□ -0.47
ZNF408-203ENST00000527008 HELLSQ9NRZ9 838 aa12.13□□□□□ -0.47
ZNF408-203ENST00000527008 MINDY4BA8MYZ0 360 aa12.12□□□□□ -0.47
ZNF408-203ENST00000527008 BCRP11274 1271 aa12.12□□□□□ -0.47
ZNF408-203ENST00000527008 AKR1B1P15121 316 aa12.12□□□□□ -0.47
ZNF408-203ENST00000527008 USP14P54578 494 aa12.12□□□□□ -0.47
ZNF408-203ENST00000527008 IRX3P78415 501 aaPredicted RBP12.12□□□□□ -0.47
ZNF408-203ENST00000527008 CCDC129Q6ZRS4 1044 aa12.12□□□□□ -0.47
ZNF408-203ENST00000527008 IFNL3Q8IZI9 196 aa12.12□□□□□ -0.47
ZNF408-203ENST00000527008 ACER1Q8TDN7 264 aa12.12□□□□□ -0.47
ZNF408-203ENST00000527008 C12orf42Q96LP6 360 aa12.12□□□□□ -0.47
ZNF408-203ENST00000527008 KIAA1683Q9H0B3 1180 aa12.12□□□□□ -0.47
ZNF408-203ENST00000527008 NAPBQ9H115 298 aa12.12□□□□□ -0.47
ZNF408-203ENST00000527008 ASCC2Q9H1I8 757 aaPredicted RBP12.12□□□□□ -0.47
ZNF408-203ENST00000527008 EMILIN3Q9NT22 766 aa12.12□□□□□ -0.47
ZNF408-203ENST00000527008 HPS5Q9UPZ3 1129 aa12.12□□□□□ -0.47
ZNF408-203ENST00000527008 ROBO3Q96MS0 1386 aa12.12□□□□□ -0.47
ZNF408-203ENST00000527008 GNRH1P01148 92 aa12.11□□□□□ -0.47
ZNF408-203ENST00000527008 PDE4AP27815 886 aa12.11□□□□□ -0.47
ZNF408-203ENST00000527008 HOXA7P31268 230 aaPredicted RBP12.11□□□□□ -0.47
ZNF408-203ENST00000527008 PSMC4P43686 418 aa12.11□□□□□ -0.47
ZNF408-203ENST00000527008 GCLCP48506 637 aaPredicted RBP12.11□□□□□ -0.47
ZNF408-203ENST00000527008 CAP1Q01518 475 aa12.11□□□□□ -0.47
ZNF408-203ENST00000527008 ZYXQ15942 572 aaKnown RBP12.11□□□□□ -0.47
ZNF408-203ENST00000527008 MCMDC2Q4G0Z9 681 aa12.11□□□□□ -0.47
ZNF408-203ENST00000527008 FAM227BQ96M60 508 aa12.11□□□□□ -0.47
ZNF408-203ENST00000527008 ARHGAP39Q9C0H5 1083 aa12.11□□□□□ -0.47
ZNF408-203ENST00000527008 PTPN22Q9Y2R2 807 aa12.11□□□□□ -0.47
ZNF408-203ENST00000527008 A0A0D9SFI3 127 aa12.1□□□□□ -0.47
ZNF408-203ENST00000527008 FMNL1O95466 1100 aaPredicted RBP12.1□□□□□ -0.47
ZNF408-203ENST00000527008 SDSP20132 328 aa12.1□□□□□ -0.47
ZNF408-203ENST00000527008 ICA1Q05084 483 aa12.1□□□□□ -0.47
ZNF408-203ENST00000527008 NMIQ13287 307 aaPredicted RBP12.1□□□□□ -0.47
ZNF408-203ENST00000527008 FAM110CQ1W6H9 321 aa12.1□□□□□ -0.47
ZNF408-203ENST00000527008 STK11IPQ8N1F8 1099 aa12.1□□□□□ -0.47
ZNF408-203ENST00000527008 ANKRD13CQ8N6S4 541 aa12.1□□□□□ -0.47
ZNF408-203ENST00000527008 MKNK2Q9HBH9 465 aa12.1□□□□□ -0.47
ZNF408-203ENST00000527008 ZNF287Q9HBT7 754 aa12.1□□□□□ -0.47
ZNF408-203ENST00000527008 ARHGEF10LQ9HCE6 1279 aa12.1□□□□□ -0.47
ZNF408-203ENST00000527008 KIAA0100Q14667 2235 aaKnown RBP12.1□□□□□ -0.47
ZNF408-203ENST00000527008 ZSWIM8A7E2V4 1837 aa12.09□□□□□ -0.47
ZNF408-203ENST00000527008 A0A1W2PRG0 241 aa12.09□□□□□ -0.47
ZNF408-203ENST00000527008 HIP1O00291 1037 aa12.09□□□□□ -0.47
ZNF408-203ENST00000527008 FOXP2O15409 715 aa12.09□□□□□ -0.47
ZNF408-203ENST00000527008 ECM2O94769 699 aaPredicted RBP12.09□□□□□ -0.47
ZNF408-203ENST00000527008 SLC3A2P08195 630 aaKnown RBP12.09□□□□□ -0.47
ZNF408-203ENST00000527008 VCAM1P19320 739 aa12.09□□□□□ -0.47
ZNF408-203ENST00000527008 RASA1P20936 1047 aa12.09□□□□□ -0.47
ZNF408-203ENST00000527008 HOXD10P28358 340 aa12.09□□□□□ -0.47
ZNF408-203ENST00000527008 CTGFP29279 349 aa12.09□□□□□ -0.47
ZNF408-203ENST00000527008 PRMT2P55345 433 aa12.09□□□□□ -0.47
ZNF408-203ENST00000527008 FCGRTP55899 365 aa12.09□□□□□ -0.47
ZNF408-203ENST00000527008 PPARAQ07869 468 aa12.09□□□□□ -0.47
ZNF408-203ENST00000527008 TTC22Q5TAA0 569 aa12.09□□□□□ -0.47
ZNF408-203ENST00000527008 CLEC10AQ8IUN9 316 aa12.09□□□□□ -0.47
ZNF408-203ENST00000527008 GTF3C2Q8WUA4 911 aaPredicted RBP12.09□□□□□ -0.47
ZNF408-203ENST00000527008 TRIM47Q96LD4 638 aa12.09□□□□□ -0.47
ZNF408-203ENST00000527008 SH2D4AQ9H788 454 aa12.09□□□□□ -0.47
ZNF408-203ENST00000527008 KANSL2Q9H9L4 492 aa12.09□□□□□ -0.47
ZNF408-203ENST00000527008 DIAPH3Q9NSV4 1193 aa12.09□□□□□ -0.47
ZNF408-203ENST00000527008 USP17L15C9J2P7 530 aa12.08□□□□□ -0.48
ZNF408-203ENST00000527008 USP17L13C9JLJ4 530 aa12.08□□□□□ -0.48
ZNF408-203ENST00000527008 USP17L11C9JVI0 530 aa12.08□□□□□ -0.48
ZNF408-203ENST00000527008 USP17L18D6R9N7 530 aa12.08□□□□□ -0.48
ZNF408-203ENST00000527008 USP17L22D6RA61 530 aa12.08□□□□□ -0.48
ZNF408-203ENST00000527008 USP17L17D6RBQ6 530 aa12.08□□□□□ -0.48
ZNF408-203ENST00000527008 USP17L19D6RCP7 530 aa12.08□□□□□ -0.48
ZNF408-203ENST00000527008 USP17L20D6RJB6 530 aa12.08□□□□□ -0.48
ZNF408-203ENST00000527008 MFAP1P55081 439 aaKnown RBP12.08□□□□□ -0.48
ZNF408-203ENST00000527008 HERVK_113P62684 666 aa12.08□□□□□ -0.48
ZNF408-203ENST00000527008 PDE4BQ07343 736 aa12.08□□□□□ -0.48
ZNF408-203ENST00000527008 USP17L24Q0WX57 530 aa12.08□□□□□ -0.48
ZNF408-203ENST00000527008 ALX1Q15699 326 aa12.08□□□□□ -0.48
ZNF408-203ENST00000527008 VPS53Q5VIR6 699 aa12.08□□□□□ -0.48
ZNF408-203ENST00000527008 ZNF444Q8N0Y2 327 aaPredicted RBP12.08□□□□□ -0.48
ZNF408-203ENST00000527008 P2RX7Q99572 595 aaKnown RBP12.08□□□□□ -0.48
ZNF408-203ENST00000527008 TMX2Q9Y320 296 aa12.08□□□□□ -0.48
ZNF408-203ENST00000527008 PTCH2Q9Y6C5 1203 aa12.08□□□□□ -0.48
ZNF408-203ENST00000527008 CCDC171Q6TFL3 1326 aa12.08□□□□□ -0.48
ZNF408-203ENST00000527008 MGAMO43451 1857 aa12.07□□□□□ -0.48
ZNF408-203ENST00000527008 EEF2P13639 858 aaKnown RBP12.07□□□□□ -0.48
ZNF408-203ENST00000527008 ATP2B2Q01814 1243 aa12.07□□□□□ -0.48
ZNF408-203ENST00000527008 CATSPERGQ6ZRH7 1159 aa12.07□□□□□ -0.48
ZNF408-203ENST00000527008 ZNF589Q86UQ0 364 aaPredicted RBP12.07□□□□□ -0.48
ZNF408-203ENST00000527008 SIAH1Q8IUQ4 282 aa12.07□□□□□ -0.48
ZNF408-203ENST00000527008 LPAR1Q92633 364 aa12.07□□□□□ -0.48
ZNF408-203ENST00000527008 RPAP3Q9H6T3 665 aaPredicted RBP12.07□□□□□ -0.48
ZNF408-203ENST00000527008 MORF4L1Q9UBU8 362 aa12.07□□□□□ -0.48
ZNF408-203ENST00000527008 SRRDQ9UH36 339 aa12.07□□□□□ -0.48
ZNF408-203ENST00000527008 GREB1LQ9C091 1923 aaPredicted RBP12.06□□□□□ -0.48
ZNF408-203ENST00000527008 TNPO2O14787 897 aaKnown RBP12.06□□□□□ -0.48
ZNF408-203ENST00000527008 PRDM1O75626 825 aa12.06□□□□□ -0.48
ZNF408-203ENST00000527008 HSPD1P10809 573 aaKnown RBP12.06□□□□□ -0.48
ZNF408-203ENST00000527008 GSPT1P15170 499 aaKnown RBP12.06□□□□□ -0.48
ZNF408-203ENST00000527008 CWC27Q6UX04 472 aaKnown RBP12.06□□□□□ -0.48
ZNF408-203ENST00000527008 GPRC5AQ8NFJ5 357 aa12.06□□□□□ -0.48
ZNF408-203ENST00000527008 ARMC5Q96C12 935 aa12.06□□□□□ -0.48
ZNF408-203ENST00000527008 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.06□□□□□ -0.48
ZNF408-203ENST00000527008 VCPKMTQ9H867 229 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms