RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 NR1I3Q14994 352 aa13.3□□□□□ -0.28
LINC01001-201ENST00000526704 TERF2Q15554 542 aa13.3□□□□□ -0.28
LINC01001-201ENST00000526704 APTXQ7Z2E3 356 aaKnown RBP13.3□□□□□ -0.28
LINC01001-201ENST00000526704 ENAHQ8N8S7 591 aaPredicted RBP13.3□□□□□ -0.28
LINC01001-201ENST00000526704 ESR2Q92731 530 aa13.3□□□□□ -0.28
LINC01001-201ENST00000526704 PHF20Q9BVI0 1012 aa13.3□□□□□ -0.28
LINC01001-201ENST00000526704 CARD6Q9BX69 1037 aa13.3□□□□□ -0.28
LINC01001-201ENST00000526704 CCDC87Q9NVE4 849 aa13.3□□□□□ -0.28
LINC01001-201ENST00000526704 KIAA1551Q9HCM1 1747 aa13.3□□□□□ -0.28
LINC01001-201ENST00000526704 ZNF804BA4D1E1 1349 aa13.3□□□□□ -0.28
LINC01001-201ENST00000526704 GOLGA6L9A6NEM1 432 aa13.3□□□□□ -0.28
LINC01001-201ENST00000526704 TRIM75PA6NK02 468 aa13.3□□□□□ -0.28
LINC01001-201ENST00000526704 WNT7AO00755 349 aa13.3□□□□□ -0.28
LINC01001-201ENST00000526704 PRDM1O75626 825 aa13.3□□□□□ -0.28
LINC01001-201ENST00000526704 ZNF771Q7L3S4 317 aaPredicted RBP13.3□□□□□ -0.28
LINC01001-201ENST00000526704 FAM177A1Q8N128 213 aaPredicted RBP13.3□□□□□ -0.28
LINC01001-201ENST00000526704 MNS1Q8NEH6 495 aa13.3□□□□□ -0.28
LINC01001-201ENST00000526704 UBXN4Q92575 508 aa13.3□□□□□ -0.28
LINC01001-201ENST00000526704 DHX58Q96C10 678 aa13.3□□□□□ -0.28
LINC01001-201ENST00000526704 RIOK1Q9BRS2 568 aaKnown RBP13.3□□□□□ -0.28
LINC01001-201ENST00000526704 MAST2Q6P0Q8 1798 aa13.29□□□□□ -0.28
LINC01001-201ENST00000526704 MAGEB6P1A0A0J9YX57 407 aa13.29□□□□□ -0.28
LINC01001-201ENST00000526704 hCG_1642624A0A1W2PR95 340 aa13.29□□□□□ -0.28
LINC01001-201ENST00000526704 PLEKHA8P1O95397 391 aa13.29□□□□□ -0.28
LINC01001-201ENST00000526704 CD44P16070 742 aaKnown RBP13.29□□□□□ -0.28
LINC01001-201ENST00000526704 KRT2P35908 639 aa13.29□□□□□ -0.28
LINC01001-201ENST00000526704 CRKLP46109 303 aaKnown RBP13.29□□□□□ -0.28
LINC01001-201ENST00000526704 PARP10Q53GL7 1025 aa13.29□□□□□ -0.28
LINC01001-201ENST00000526704 SH3RF1Q7Z6J0 888 aa13.29□□□□□ -0.28
LINC01001-201ENST00000526704 KIFC2Q96AC6 838 aa13.29□□□□□ -0.28
LINC01001-201ENST00000526704 EPSTI1Q96J88 318 aa13.29□□□□□ -0.28
LINC01001-201ENST00000526704 SYNRGQ9UMZ2 1314 aa13.29□□□□□ -0.28
LINC01001-201ENST00000526704 CCDC88AQ3V6T2 1871 aa13.29□□□□□ -0.28
LINC01001-201ENST00000526704 EFCAB8A8MWE9 144 aa13.29□□□□□ -0.28
LINC01001-201ENST00000526704 EXOC5O00471 708 aa13.29□□□□□ -0.28
LINC01001-201ENST00000526704 ZRANB2O95218 330 aaKnown RBP eCLIP13.29□□□□□ -0.28
LINC01001-201ENST00000526704 PNMA6AP0CW24 399 aaPredicted RBP13.29□□□□□ -0.28
LINC01001-201ENST00000526704 CUL4BQ13620 913 aa13.29□□□□□ -0.28
LINC01001-201ENST00000526704 BMS1Q14692 1282 aaKnown RBP13.29□□□□□ -0.28
LINC01001-201ENST00000526704 PPP2R5BQ15173 497 aa13.29□□□□□ -0.28
LINC01001-201ENST00000526704 ZSCAN10Q96SZ4 725 aaPredicted RBP13.29□□□□□ -0.28
LINC01001-201ENST00000526704 DESI2Q9BSY9 194 aa13.29□□□□□ -0.28
LINC01001-201ENST00000526704 MYH1P12882 1939 aa13.29□□□□□ -0.28
LINC01001-201ENST00000526704 CYP2D7A0A087X1C5 515 aa13.28□□□□□ -0.28
LINC01001-201ENST00000526704 TEX33O43247 280 aa13.28□□□□□ -0.28
LINC01001-201ENST00000526704 PRPF3O43395 683 aaKnown RBP13.28□□□□□ -0.28
LINC01001-201ENST00000526704 CASP1P29466 404 aa13.28□□□□□ -0.28
LINC01001-201ENST00000526704 AKAP17AQ02040 695 aaKnown RBP13.28□□□□□ -0.28
LINC01001-201ENST00000526704 SYMPKQ92797 1274 aaKnown RBP13.28□□□□□ -0.28
LINC01001-201ENST00000526704 PAGE5Q96GU1 130 aa13.28□□□□□ -0.28
LINC01001-201ENST00000526704 ABCF2Q9UG63 623 aa13.28□□□□□ -0.28
LINC01001-201ENST00000526704 MRFAP1Q9Y605 127 aa13.28□□□□□ -0.28
LINC01001-201ENST00000526704 CASQ1P31415 396 aa13.28□□□□□ -0.28
LINC01001-201ENST00000526704 AFMP43652 599 aa13.28□□□□□ -0.28
LINC01001-201ENST00000526704 GNG11P61952 73 aa13.28□□□□□ -0.28
LINC01001-201ENST00000526704 MAP3K9P80192 1104 aa13.28□□□□□ -0.28
LINC01001-201ENST00000526704 MTF1Q14872 753 aa13.28□□□□□ -0.28
LINC01001-201ENST00000526704 NPY5RQ15761 445 aa13.28□□□□□ -0.28
LINC01001-201ENST00000526704 NOM1Q5C9Z4 860 aaKnown RBP13.28□□□□□ -0.28
LINC01001-201ENST00000526704 TNFRSF25Q93038 417 aa13.28□□□□□ -0.28
LINC01001-201ENST00000526704 MRPL44Q9H9J2 332 aaKnown RBP13.28□□□□□ -0.28
LINC01001-201ENST00000526704 XBP1P17861 261 aa13.27□□□□□ -0.28
LINC01001-201ENST00000526704 GYG1P46976 350 aa13.27□□□□□ -0.28
LINC01001-201ENST00000526704 DYNLL1P63167 89 aaKnown RBP13.27□□□□□ -0.28
LINC01001-201ENST00000526704 DPYDQ12882 1025 aa13.27□□□□□ -0.28
LINC01001-201ENST00000526704 CDKAL1Q5VV42 579 aa13.27□□□□□ -0.28
LINC01001-201ENST00000526704 SPATA1Q5VX52 437 aa13.27□□□□□ -0.28
LINC01001-201ENST00000526704 NIP7Q9Y221 180 aaKnown RBP eCLIP13.27□□□□□ -0.28
LINC01001-201ENST00000526704 NRAPQ86VF7 1730 aa13.27□□□□□ -0.28
LINC01001-201ENST00000526704 WTIPA6NIX2 430 aaPredicted RBP13.27□□□□□ -0.29
LINC01001-201ENST00000526704 PBX1P40424 430 aa13.27□□□□□ -0.29
LINC01001-201ENST00000526704 CT47A1Q5JQC4 288 aaPredicted RBP13.27□□□□□ -0.29
LINC01001-201ENST00000526704 IFIT1BQ5T764 474 aaKnown RBP13.27□□□□□ -0.29
LINC01001-201ENST00000526704 PANX2Q96RD6 677 aa13.27□□□□□ -0.29
LINC01001-201ENST00000526704 ARGLU1Q9NWB6 273 aaPredicted RBP13.27□□□□□ -0.29
LINC01001-201ENST00000526704 SOWAHDA6NJG2 315 aa13.27□□□□□ -0.29
LINC01001-201ENST00000526704 AKR1B15C9JRZ8 316 aaPredicted RBP13.27□□□□□ -0.29
LINC01001-201ENST00000526704 PLA2G4AP47712 749 aa13.27□□□□□ -0.29
LINC01001-201ENST00000526704 STX17P56962 302 aa13.27□□□□□ -0.29
LINC01001-201ENST00000526704 TROAPQ12815 778 aa13.27□□□□□ -0.29
LINC01001-201ENST00000526704 KARSQ15046 597 aaKnown RBP13.27□□□□□ -0.29
LINC01001-201ENST00000526704 KLHL10Q6JEL2 608 aa13.27□□□□□ -0.29
LINC01001-201ENST00000526704 CATIPQ7Z7H3 387 aa13.27□□□□□ -0.29
LINC01001-201ENST00000526704 SMYD4Q8IYR2 804 aaPredicted RBP13.27□□□□□ -0.29
LINC01001-201ENST00000526704 ZNF384Q8TF68 577 aa13.27□□□□□ -0.29
LINC01001-201ENST00000526704 FERMT2Q96AC1 680 aa13.27□□□□□ -0.29
LINC01001-201ENST00000526704 RBM28Q9NW13 759 aaKnown RBP13.27□□□□□ -0.29
LINC01001-201ENST00000526704 V9GY48 417 aaPredicted RBP13.27□□□□□ -0.29
LINC01001-201ENST00000526704 CNTNAP5Q8WYK1 1306 aa13.26□□□□□ -0.29
LINC01001-201ENST00000526704 ATP6V1AP38606 617 aa13.26□□□□□ -0.29
LINC01001-201ENST00000526704 ITPK1Q13572 414 aa13.26□□□□□ -0.29
LINC01001-201ENST00000526704 TMCO3Q6UWJ1 677 aa13.26□□□□□ -0.29
LINC01001-201ENST00000526704 TMTC3Q6ZXV5 915 aa13.26□□□□□ -0.29
LINC01001-201ENST00000526704 BRIP1Q9BX63 1249 aa13.26□□□□□ -0.29
LINC01001-201ENST00000526704 EPC1Q9H2F5 836 aa13.26□□□□□ -0.29
LINC01001-201ENST00000526704 ADD3Q9UEY8 706 aaKnown RBP13.26□□□□□ -0.29
LINC01001-201ENST00000526704 PPP1R3GB7ZBB8 358 aa13.26□□□□□ -0.29
LINC01001-201ENST00000526704 FGRP09769 529 aa13.26□□□□□ -0.29
LINC01001-201ENST00000526704 PPP2R3AQ06190 1150 aa13.26□□□□□ -0.29
LINC01001-201ENST00000526704 RSRC2Q7L4I2 434 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms